RNA–Protein interactions for RNA: ENST00000525095.2

VPS26B-202, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26B, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-202ENST00000525095 MST1RQ04912 1400 aa25.17■■□□□ 1.62
VPS26B-202ENST00000525095 KIF20BQ96Q89 1820 aa25.16■■□□□ 1.62
VPS26B-202ENST00000525095 TTC21BQ7Z4L5 1316 aa25.16■■□□□ 1.62
VPS26B-202ENST00000525095 NRKQ7Z2Y5 1582 aa25.15■■□□□ 1.62
VPS26B-202ENST00000525095 SSH2Q76I76 1423 aa25.15■■□□□ 1.62
VPS26B-202ENST00000525095 NME9Q86XW9 330 aa25.14■■□□□ 1.62
VPS26B-202ENST00000525095 TNNT2P45379 298 aaPredicted RBP25.13■■□□□ 1.61
VPS26B-202ENST00000525095 ANKRD26Q9UPS8 1709 aa25.12■■□□□ 1.61
VPS26B-202ENST00000525095 LTBP4Q8N2S1 1624 aa25.11■■□□□ 1.61
VPS26B-202ENST00000525095 TTC21AQ8NDW8 1320 aa25.11■■□□□ 1.61
VPS26B-202ENST00000525095 PSME1Q06323 249 aa25.09■■□□□ 1.61
VPS26B-202ENST00000525095 YTHDC1Q96MU7 727 aaKnown RBP25.09■■□□□ 1.61
VPS26B-202ENST00000525095 ZRANB1Q9UGI0 708 aa25.09■■□□□ 1.61
VPS26B-202ENST00000525095 KIF1AQ12756 1690 aa25.08■■□□□ 1.61
VPS26B-202ENST00000525095 FOXO3O43524 673 aa25.08■■□□□ 1.61
VPS26B-202ENST00000525095 COG3Q96JB2 828 aa25.08■■□□□ 1.61
VPS26B-202ENST00000525095 FAM9BQ8IZU0 186 aa25.05■■□□□ 1.6
VPS26B-202ENST00000525095 PNISRQ8TF01 805 aaKnown RBP25.05■■□□□ 1.6
VPS26B-202ENST00000525095 SLAIN2Q9P270 581 aa25.05■■□□□ 1.6
VPS26B-202ENST00000525095 PAK3O75914 559 aaPredicted RBP25.04■■□□□ 1.6
VPS26B-202ENST00000525095 SCAF1Q9H7N4 1312 aaKnown RBP25.04■■□□□ 1.6
VPS26B-202ENST00000525095 OVOS2A0A0J9YW53 1432 aa25.02■■□□□ 1.6
VPS26B-202ENST00000525095 OVOS2Q6IE36 1432 aa25.02■■□□□ 1.6
VPS26B-202ENST00000525095 MTHFSP49914 203 aa25.01■■□□□ 1.59
VPS26B-202ENST00000525095 XPCQ01831 940 aaPredicted RBP25.01■■□□□ 1.59
VPS26B-202ENST00000525095 KRT28Q7Z3Y7 464 aa25.01■■□□□ 1.59
VPS26B-202ENST00000525095 USP31Q70CQ4 1352 aa25■■□□□ 1.59
VPS26B-202ENST00000525095 PIK3C2AO00443 1686 aa25■■□□□ 1.59
VPS26B-202ENST00000525095 BRINP3Q76B58 766 aa25■■□□□ 1.59
VPS26B-202ENST00000525095 ABTB2Q8N961 1025 aa25■■□□□ 1.59
VPS26B-202ENST00000525095 NLRP6P59044 892 aa24.98■■□□□ 1.59
VPS26B-202ENST00000525095 AATKQ6ZMQ8 1374 aa24.97■■□□□ 1.59
VPS26B-202ENST00000525095 NPHP3Q7Z494 1330 aa24.97■■□□□ 1.59
VPS26B-202ENST00000525095 FBLN1P23142 703 aa24.97■■□□□ 1.59
VPS26B-202ENST00000525095 NUTM2GQ5VZR2 741 aa24.96■■□□□ 1.59
VPS26B-202ENST00000525095 DDX17Q92841 729 aaKnown RBP24.96■■□□□ 1.59
VPS26B-202ENST00000525095 CFAP53Q96M91 514 aa24.95■■□□□ 1.58
VPS26B-202ENST00000525095 POLKQ9UBT6 870 aa24.95■■□□□ 1.58
VPS26B-202ENST00000525095 TRPM3Q9HCF6 1732 aaPredicted RBP24.94■■□□□ 1.58
VPS26B-202ENST00000525095 USP54Q70EL1 1684 aa24.93■■□□□ 1.58
VPS26B-202ENST00000525095 MAP2P11137 1827 aaKnown RBP24.92■■□□□ 1.58
VPS26B-202ENST00000525095 RRS1Q15050 365 aaKnown RBP24.9■■□□□ 1.58
VPS26B-202ENST00000525095 WDR43Q15061 677 aaKnown RBP eCLIP24.9■■□□□ 1.58
VPS26B-202ENST00000525095 EMILIN1Q9Y6C2 1016 aa24.9■■□□□ 1.58
VPS26B-202ENST00000525095 SBNO1A3KN83 1393 aa24.9■■□□□ 1.58
VPS26B-202ENST00000525095 PXDNQ92626 1479 aa24.9■■□□□ 1.58
VPS26B-202ENST00000525095 MARF1Q9Y4F3 1742 aaKnown RBP24.9■■□□□ 1.58
VPS26B-202ENST00000525095 PPM1GO15355 546 aaPredicted RBP24.89■■□□□ 1.58
VPS26B-202ENST00000525095 LMOD2Q6P5Q4 547 aa24.89■■□□□ 1.58
VPS26B-202ENST00000525095 SOX12O15370 315 aa24.88■■□□□ 1.57
VPS26B-202ENST00000525095 SMG6Q86US8 1419 aaKnown RBP24.88■■□□□ 1.57
VPS26B-202ENST00000525095 PNPLA6Q8IY17 1366 aa24.88■■□□□ 1.57
VPS26B-202ENST00000525095 ADAMTS8Q9UP79 889 aa24.87■■□□□ 1.57
VPS26B-202ENST00000525095 INSRP06213 1382 aa24.86■■□□□ 1.57
VPS26B-202ENST00000525095 ALS2Q96Q42 1657 aa24.86■■□□□ 1.57
VPS26B-202ENST00000525095 HNRNPUQ00839 825 aaKnown RBP eCLIP24.85■■□□□ 1.57
VPS26B-202ENST00000525095 SOS2Q07890 1332 aaPredicted RBP24.85■■□□□ 1.57
VPS26B-202ENST00000525095 COL3A1P02461 1466 aaPredicted RBP24.85■■□□□ 1.57
VPS26B-202ENST00000525095 SPATA31A3Q5VYP0 1347 aa24.84■■□□□ 1.57
VPS26B-202ENST00000525095 TNS3Q68CZ2 1445 aa24.84■■□□□ 1.57
VPS26B-202ENST00000525095 CDK12Q9NYV4 1490 aaPredicted RBP24.83■■□□□ 1.57
VPS26B-202ENST00000525095 SHPRHQ149N8 1683 aa24.83■■□□□ 1.57
VPS26B-202ENST00000525095 DIAPH1O60610 1272 aaKnown RBP24.82■■□□□ 1.56
VPS26B-202ENST00000525095 KCNH5Q8NCM2 988 aa24.82■■□□□ 1.56
VPS26B-202ENST00000525095 MAP3K19Q56UN5 1328 aa24.82■■□□□ 1.56
VPS26B-202ENST00000525095 NUDCQ9Y266 331 aa24.81■■□□□ 1.56
VPS26B-202ENST00000525095 USP19O94966 1318 aa24.81■■□□□ 1.56
VPS26B-202ENST00000525095 NHSL1Q5SYE7 1610 aa24.81■■□□□ 1.56
VPS26B-202ENST00000525095 TOM1O60784 492 aa24.8■■□□□ 1.56
VPS26B-202ENST00000525095 ROBO1Q9Y6N7 1651 aa24.8■■□□□ 1.56
VPS26B-202ENST00000525095 ARHGEF10O15013 1369 aa24.79■■□□□ 1.56
VPS26B-202ENST00000525095 SLIT3O75094 1523 aa24.79■■□□□ 1.56
VPS26B-202ENST00000525095 GCP02774 474 aa24.79■■□□□ 1.56
VPS26B-202ENST00000525095 BLMP54132 1417 aaPredicted RBP24.79■■□□□ 1.56
VPS26B-202ENST00000525095 PLEKHG5O94827 1062 aa24.78■■□□□ 1.56
VPS26B-202ENST00000525095 NFAT5O94916 1531 aa24.78■■□□□ 1.56
VPS26B-202ENST00000525095 PEAK1Q9H792 1746 aa24.78■■□□□ 1.56
VPS26B-202ENST00000525095 AMPHP49418 695 aa24.77■■□□□ 1.56
VPS26B-202ENST00000525095 IQSEC2Q5JU85 1478 aa24.76■■□□□ 1.55
VPS26B-202ENST00000525095 U2SURPO15042 1029 aaKnown RBP24.76■■□□□ 1.55
VPS26B-202ENST00000525095 FLT4P35916 1363 aa24.76■■□□□ 1.55
VPS26B-202ENST00000525095 KIF24Q5T7B8 1368 aa24.76■■□□□ 1.55
VPS26B-202ENST00000525095 CENPBP07199 599 aaPredicted RBP24.76■■□□□ 1.55
VPS26B-202ENST00000525095 U2AF1L5P0DN76 240 aaPredicted RBP24.76■■□□□ 1.55
VPS26B-202ENST00000525095 U2AF1Q01081 240 aaKnown RBP eCLIP24.76■■□□□ 1.55
VPS26B-202ENST00000525095 MED1Q15648 1581 aaPredicted RBP24.75■■□□□ 1.55
VPS26B-202ENST00000525095 IL13P35225 146 aa24.75■■□□□ 1.55
VPS26B-202ENST00000525095 HSP90AB2PQ58FF8 381 aa24.75■■□□□ 1.55
VPS26B-202ENST00000525095 UBAP1LF5GYI3 381 aa24.73■■□□□ 1.55
VPS26B-202ENST00000525095 CERKQ8TCT0 537 aa24.73■■□□□ 1.55
VPS26B-202ENST00000525095 AHDC1Q5TGY3 1603 aaPredicted RBP24.72■■□□□ 1.55
VPS26B-202ENST00000525095 HOXC9P31274 260 aa24.71■■□□□ 1.55
VPS26B-202ENST00000525095 CCDC146Q8IYE0 955 aa24.71■■□□□ 1.55
VPS26B-202ENST00000525095 CABLES1Q8TDN4 633 aa24.71■■□□□ 1.55
VPS26B-202ENST00000525095 LTN1O94822 1766 aa24.71■■□□□ 1.55
VPS26B-202ENST00000525095 SENP3-EIF4A1A0A087X0R7 540 aa24.71■■□□□ 1.55
VPS26B-202ENST00000525095 PIP4K2BP78356 416 aa24.71■■□□□ 1.55
VPS26B-202ENST00000525095 EIF4A2Q14240 407 aaKnown RBP24.71■■□□□ 1.55
VPS26B-202ENST00000525095 ARHGEF25Q86VW2 580 aa24.71■■□□□ 1.55
VPS26B-202ENST00000525095 RTL1A6NKG5 1358 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms