RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 CRYBG1Q9Y4K1 1723 aa20.44■□□□□ 0.86
CSTF3-206ENST00000524827 PSDA5PKW4 1024 aaPredicted RBP20.43■□□□□ 0.86
CSTF3-206ENST00000524827 RGPD1P0DJD0 1748 aa20.42■□□□□ 0.86
CSTF3-206ENST00000524827 SPATA31A5Q5VU36 1347 aa20.42■□□□□ 0.86
CSTF3-206ENST00000524827 SPATA31A7Q8IWB4 1347 aa20.42■□□□□ 0.86
CSTF3-206ENST00000524827 THSD7AQ9UPZ6 1657 aa20.42■□□□□ 0.86
CSTF3-206ENST00000524827 WASLO00401 505 aaPredicted RBP20.41■□□□□ 0.86
CSTF3-206ENST00000524827 RAB3GAP2Q9H2M9 1393 aa20.41■□□□□ 0.86
CSTF3-206ENST00000524827 FAM182BQ5T319 152 aa20.4■□□□□ 0.86
CSTF3-206ENST00000524827 HRCP23327 699 aa20.39■□□□□ 0.85
CSTF3-206ENST00000524827 NGDNQ8NEJ9 315 aaKnown RBP20.39■□□□□ 0.85
CSTF3-206ENST00000524827 PRDM11Q9NQV5 511 aa20.39■□□□□ 0.85
CSTF3-206ENST00000524827 PAK3O75914 559 aaPredicted RBP20.38■□□□□ 0.85
CSTF3-206ENST00000524827 EN1Q05925 392 aaPredicted RBP20.38■□□□□ 0.85
CSTF3-206ENST00000524827 KDM2AQ9Y2K7 1162 aa20.38■□□□□ 0.85
CSTF3-206ENST00000524827 TNS1Q9HBL0 1735 aaKnown RBP20.38■□□□□ 0.85
CSTF3-206ENST00000524827 ATP7BP35670 1465 aa20.37■□□□□ 0.85
CSTF3-206ENST00000524827 DISP2A7MBM2 1401 aa20.36■□□□□ 0.85
CSTF3-206ENST00000524827 ITSN1Q15811 1721 aa20.36■□□□□ 0.85
CSTF3-206ENST00000524827 ARHGEF28Q8N1W1 1705 aaKnown RBP20.36■□□□□ 0.85
CSTF3-206ENST00000524827 DCAF11Q8TEB1 546 aa20.36■□□□□ 0.85
CSTF3-206ENST00000524827 PHRF1Q9P1Y6 1649 aaKnown RBP20.35■□□□□ 0.85
CSTF3-206ENST00000524827 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
CSTF3-206ENST00000524827 SPATA31A1Q5TZJ5 1347 aa20.32■□□□□ 0.84
CSTF3-206ENST00000524827 R3HDM1Q15032 1099 aaKnown RBP20.32■□□□□ 0.84
CSTF3-206ENST00000524827 CHRNA2Q15822 529 aa20.32■□□□□ 0.84
CSTF3-206ENST00000524827 NUDT16Q96DE0 195 aaKnown RBP20.32■□□□□ 0.84
CSTF3-206ENST00000524827 STAC3Q96MF2 364 aa20.3■□□□□ 0.84
CSTF3-206ENST00000524827 STRN4Q9NRL3 753 aa20.3■□□□□ 0.84
CSTF3-206ENST00000524827 EZH2Q15910 746 aaKnown RBP20.29■□□□□ 0.84
CSTF3-206ENST00000524827 TOPAZ1Q8N9V7 1692 aa20.29■□□□□ 0.84
CSTF3-206ENST00000524827 NUTM2GQ5VZR2 741 aa20.28■□□□□ 0.84
CSTF3-206ENST00000524827 TRIM37O94972 964 aa20.27■□□□□ 0.84
CSTF3-206ENST00000524827 ZC3H6P61129 1189 aaKnown RBP20.27■□□□□ 0.84
CSTF3-206ENST00000524827 FAM196AQ6ZSG2 479 aa20.27■□□□□ 0.84
CSTF3-206ENST00000524827 NRKQ7Z2Y5 1582 aa20.26■□□□□ 0.83
CSTF3-206ENST00000524827 POLR3AO14802 1390 aaPredicted RBP20.26■□□□□ 0.83
CSTF3-206ENST00000524827 CAMKK2Q96RR4 588 aa20.26■□□□□ 0.83
CSTF3-206ENST00000524827 CDK19Q9BWU1 502 aa20.26■□□□□ 0.83
CSTF3-206ENST00000524827 SSH2Q76I76 1423 aa20.26■□□□□ 0.83
CSTF3-206ENST00000524827 ACEP12821 1306 aa20.25■□□□□ 0.83
CSTF3-206ENST00000524827 USP35Q9P2H5 1018 aa20.24■□□□□ 0.83
CSTF3-206ENST00000524827 PARD3Q8TEW0 1356 aa20.23■□□□□ 0.83
CSTF3-206ENST00000524827 NBPF8Q3BBV2 869 aa20.23■□□□□ 0.83
CSTF3-206ENST00000524827 CAMTA1Q9Y6Y1 1673 aa20.22■□□□□ 0.83
CSTF3-206ENST00000524827 APBA3O96018 575 aa20.22■□□□□ 0.83
CSTF3-206ENST00000524827 BARGINQ6ZT62 677 aa20.22■□□□□ 0.83
CSTF3-206ENST00000524827 CCDC61Q9Y6R9 512 aa20.22■□□□□ 0.83
CSTF3-206ENST00000524827 LMO7Q8WWI1 1683 aa20.22■□□□□ 0.83
CSTF3-206ENST00000524827 RREB1Q92766 1687 aa20.22■□□□□ 0.83
CSTF3-206ENST00000524827 PLEKHG3A1L390 1219 aa20.21■□□□□ 0.83
CSTF3-206ENST00000524827 EVA1CP58658 441 aa20.21■□□□□ 0.83
CSTF3-206ENST00000524827 CPDO75976 1380 aa20.21■□□□□ 0.83
CSTF3-206ENST00000524827 PDE3BQ13370 1112 aa20.2■□□□□ 0.82
CSTF3-206ENST00000524827 LARP1Q6PKG0 1096 aaKnown RBP20.2■□□□□ 0.82
CSTF3-206ENST00000524827 USP19O94966 1318 aa20.2■□□□□ 0.82
CSTF3-206ENST00000524827 NUP188Q5SRE5 1749 aa20.19■□□□□ 0.82
CSTF3-206ENST00000524827 KIAA1210Q9ULL0 1709 aa20.19■□□□□ 0.82
CSTF3-206ENST00000524827 ABTB2Q8N961 1025 aa20.19■□□□□ 0.82
CSTF3-206ENST00000524827 TCP11L2Q8N4U5 519 aa20.18■□□□□ 0.82
CSTF3-206ENST00000524827 PARP4Q9UKK3 1724 aaKnown RBP20.14■□□□□ 0.81
CSTF3-206ENST00000524827 COL5A2P05997 1499 aaPredicted RBP20.14■□□□□ 0.81
CSTF3-206ENST00000524827 PPIP5K1Q6PFW1 1433 aa20.14■□□□□ 0.81
CSTF3-206ENST00000524827 GCP02774 474 aa20.13■□□□□ 0.81
CSTF3-206ENST00000524827 NBPF1Q3BBV0 1214 aa20.13■□□□□ 0.81
CSTF3-206ENST00000524827 NLRP13Q86W25 1043 aa20.13■□□□□ 0.81
CSTF3-206ENST00000524827 THRAP3Q9Y2W1 955 aaKnown RBP20.13■□□□□ 0.81
CSTF3-206ENST00000524827 SRPK2P78362 688 aaKnown RBP20.12■□□□□ 0.81
CSTF3-206ENST00000524827 NBPF14Q5TI25 921 aa20.11■□□□□ 0.81
CSTF3-206ENST00000524827 CENPJQ9HC77 1338 aaPredicted RBP20.1■□□□□ 0.81
CSTF3-206ENST00000524827 CRB1P82279 1406 aa20.1■□□□□ 0.81
CSTF3-206ENST00000524827 BRD4O60885 1362 aaPredicted RBP20.09■□□□□ 0.81
CSTF3-206ENST00000524827 CABP2Q9NPB3 220 aa20.09■□□□□ 0.81
CSTF3-206ENST00000524827 PEAK1Q9H792 1746 aa20.09■□□□□ 0.81
CSTF3-206ENST00000524827 QRICH2Q9H0J4 1663 aa20.08■□□□□ 0.81
CSTF3-206ENST00000524827 OVOS2A0A0G2JMS6 1433 aa20.08■□□□□ 0.8
CSTF3-206ENST00000524827 OVOS2A0A0J9YW53 1432 aa20.08■□□□□ 0.8
CSTF3-206ENST00000524827 USP6P35125 1406 aa20.08■□□□□ 0.8
CSTF3-206ENST00000524827 OVOS2Q6IE36 1432 aa20.08■□□□□ 0.8
CSTF3-206ENST00000524827 SLIT3O75094 1523 aa20.07■□□□□ 0.8
CSTF3-206ENST00000524827 LRRC37A3O60309 1634 aa20.07■□□□□ 0.8
CSTF3-206ENST00000524827 ZBTB7CA1YPR0 619 aa20.07■□□□□ 0.8
CSTF3-206ENST00000524827 C11orf95C9JLR9 678 aaPredicted RBP20.06■□□□□ 0.8
CSTF3-206ENST00000524827 AATKQ6ZMQ8 1374 aa20.06■□□□□ 0.8
CSTF3-206ENST00000524827 RGPD3A6NKT7 1758 aaPredicted RBP20.06■□□□□ 0.8
CSTF3-206ENST00000524827 RGPD4Q7Z3J3 1758 aa20.06■□□□□ 0.8
CSTF3-206ENST00000524827 NLRP6P59044 892 aa20.05■□□□□ 0.8
CSTF3-206ENST00000524827 SPON1Q9HCB6 807 aa20.04■□□□□ 0.8
CSTF3-206ENST00000524827 CABP1Q9NZU7 370 aa20.04■□□□□ 0.8
CSTF3-206ENST00000524827 SBF2Q86WG5 1849 aa20.04■□□□□ 0.8
CSTF3-206ENST00000524827 PIK3C2AO00443 1686 aa20.03■□□□□ 0.8
CSTF3-206ENST00000524827 COL18A1P39060 1754 aa20.03■□□□□ 0.8
CSTF3-206ENST00000524827 WNK3Q9BYP7 1800 aa20.02■□□□□ 0.8
CSTF3-206ENST00000524827 KCNQ2O43526 872 aa20.02■□□□□ 0.8
CSTF3-206ENST00000524827 PPP1R1BQ9UD71 204 aaPredicted RBP20.02■□□□□ 0.8
CSTF3-206ENST00000524827 YY1P25490 414 aa20.01■□□□□ 0.79
CSTF3-206ENST00000524827 DDB1Q16531 1140 aa20.01■□□□□ 0.79
CSTF3-206ENST00000524827 TOM1L2Q6ZVM7 507 aa20.01■□□□□ 0.79
CSTF3-206ENST00000524827 NINLQ9Y2I6 1382 aa20■□□□□ 0.79
CSTF3-206ENST00000524827 CPSF1Q10570 1443 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms