RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 DCAF11Q8TEB1 546 aa10.46□□□□□ -0.73
CTR9-202ENST00000524523 KCNK17Q96T54 332 aa10.46□□□□□ -0.73
CTR9-202ENST00000524523 MYT1LQ9UL68 1186 aa10.46□□□□□ -0.73
CTR9-202ENST00000524523 TRPM2O94759 1503 aa10.46□□□□□ -0.74
CTR9-202ENST00000524523 TET3O43151 1660 aa10.46□□□□□ -0.74
CTR9-202ENST00000524523 HECW2Q9P2P5 1572 aa10.45□□□□□ -0.74
CTR9-202ENST00000524523 ROCK2O75116 1388 aaKnown RBP10.45□□□□□ -0.74
CTR9-202ENST00000524523 ADAM33Q9BZ11 813 aa10.45□□□□□ -0.74
CTR9-202ENST00000524523 RNF17Q9BXT8 1623 aaKnown RBP10.44□□□□□ -0.74
CTR9-202ENST00000524523 PRAG1Q86YV5 1406 aa10.44□□□□□ -0.74
CTR9-202ENST00000524523 WASHC2AQ641Q2 1341 aa10.44□□□□□ -0.74
CTR9-202ENST00000524523 PSEN2P49810 448 aa10.44□□□□□ -0.74
CTR9-202ENST00000524523 FAM69CQ0P6D2 419 aa10.44□□□□□ -0.74
CTR9-202ENST00000524523 NBR1Q14596 966 aa10.44□□□□□ -0.74
CTR9-202ENST00000524523 ARHGAP31Q2M1Z3 1444 aa10.43□□□□□ -0.74
CTR9-202ENST00000524523 CCDC7Q96M83 1385 aa10.43□□□□□ -0.74
CTR9-202ENST00000524523 GRXCR2A6NFK2 248 aa10.43□□□□□ -0.74
CTR9-202ENST00000524523 CARD11Q9BXL7 1154 aa10.43□□□□□ -0.74
CTR9-202ENST00000524523 PLSCR2Q9NRY7 297 aa10.43□□□□□ -0.74
CTR9-202ENST00000524523 ZMYM4Q5VZL5 1548 aa10.43□□□□□ -0.74
CTR9-202ENST00000524523 USP47Q96K76 1375 aa10.42□□□□□ -0.74
CTR9-202ENST00000524523 RPGRIP1LQ68CZ1 1315 aa10.42□□□□□ -0.74
CTR9-202ENST00000524523 SPNS2Q8IVW8 549 aa10.42□□□□□ -0.74
CTR9-202ENST00000524523 LAMC1P11047 1609 aa10.41□□□□□ -0.74
CTR9-202ENST00000524523 MROH1Q8NDA8 1641 aa10.41□□□□□ -0.74
CTR9-202ENST00000524523 CNTLNQ9NXG0 1405 aa10.41□□□□□ -0.74
CTR9-202ENST00000524523 DIP2BQ9P265 1576 aa10.4□□□□□ -0.74
CTR9-202ENST00000524523 REREQ9P2R6 1566 aa10.4□□□□□ -0.74
CTR9-202ENST00000524523 EFCAB6Q5THR3 1501 aa10.4□□□□□ -0.74
CTR9-202ENST00000524523 RAPGEF3O95398 923 aa10.4□□□□□ -0.74
CTR9-202ENST00000524523 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
CTR9-202ENST00000524523 RBM33Q96EV2 1170 aaKnown RBP10.4□□□□□ -0.74
CTR9-202ENST00000524523 E9PCH4 1651 aa10.4□□□□□ -0.74
CTR9-202ENST00000524523 WASHC2CQ9Y4E1 1318 aa10.39□□□□□ -0.75
CTR9-202ENST00000524523 TK2O00142 265 aa10.39□□□□□ -0.75
CTR9-202ENST00000524523 AGLP35573 1532 aa10.38□□□□□ -0.75
CTR9-202ENST00000524523 MAP3K7O43318 606 aa10.38□□□□□ -0.75
CTR9-202ENST00000524523 EN1Q05925 392 aaPredicted RBP10.38□□□□□ -0.75
CTR9-202ENST00000524523 RGL3Q3MIN7 710 aa10.38□□□□□ -0.75
CTR9-202ENST00000524523 C6orf132Q5T0Z8 1188 aa10.38□□□□□ -0.75
CTR9-202ENST00000524523 HIRIP3Q9BW71 556 aaPredicted RBP10.38□□□□□ -0.75
CTR9-202ENST00000524523 SLC52A1Q9NWF4 448 aa10.38□□□□□ -0.75
CTR9-202ENST00000524523 FRMPD1Q5SYB0 1578 aa10.38□□□□□ -0.75
CTR9-202ENST00000524523 RICTORQ6R327 1708 aa10.38□□□□□ -0.75
CTR9-202ENST00000524523 KTN1Q86UP2 1357 aaKnown RBP10.38□□□□□ -0.75
CTR9-202ENST00000524523 KIF7Q2M1P5 1343 aa10.37□□□□□ -0.75
CTR9-202ENST00000524523 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
CTR9-202ENST00000524523 MYOM2P54296 1465 aa10.36□□□□□ -0.75
CTR9-202ENST00000524523 SPHKAPQ2M3C7 1700 aa10.36□□□□□ -0.75
CTR9-202ENST00000524523 DIP2CQ9Y2E4 1556 aa10.36□□□□□ -0.75
CTR9-202ENST00000524523 NOS1P29475 1434 aa10.36□□□□□ -0.75
CTR9-202ENST00000524523 PPP1R3GB7ZBB8 358 aa10.36□□□□□ -0.75
CTR9-202ENST00000524523 C11orf95C9JLR9 678 aaPredicted RBP10.36□□□□□ -0.75
CTR9-202ENST00000524523 CDCA8Q53HL2 280 aa10.36□□□□□ -0.75
CTR9-202ENST00000524523 NPATQ14207 1427 aa10.35□□□□□ -0.75
CTR9-202ENST00000524523 OSBPP22059 807 aa10.35□□□□□ -0.75
CTR9-202ENST00000524523 ZNF326Q5BKZ1 582 aaKnown RBP10.35□□□□□ -0.75
CTR9-202ENST00000524523 GGT6Q6P531 493 aa10.35□□□□□ -0.75
CTR9-202ENST00000524523 SLC4A5Q9BY07 1137 aa10.35□□□□□ -0.75
CTR9-202ENST00000524523 TRPM1Q7Z4N2 1603 aa10.35□□□□□ -0.75
CTR9-202ENST00000524523 ABCC3O15438 1527 aa10.34□□□□□ -0.75
CTR9-202ENST00000524523 ABCA6Q8N139 1617 aa10.34□□□□□ -0.75
CTR9-202ENST00000524523 POLR1AO95602 1720 aaPredicted RBP10.34□□□□□ -0.75
CTR9-202ENST00000524523 ST20-MTHFSA0A0A6YYL1 179 aa10.34□□□□□ -0.75
CTR9-202ENST00000524523 SEMA3EO15041 775 aa10.34□□□□□ -0.75
CTR9-202ENST00000524523 MLLT3P42568 568 aaPredicted RBP10.34□□□□□ -0.75
CTR9-202ENST00000524523 ZC3H13Q5T200 1668 aaKnown RBP10.34□□□□□ -0.75
CTR9-202ENST00000524523 CEP152O94986 1710 aa10.33□□□□□ -0.76
CTR9-202ENST00000524523 MMRN1Q13201 1228 aa10.33□□□□□ -0.76
CTR9-202ENST00000524523 ZBED2Q9BTP6 218 aa10.33□□□□□ -0.76
CTR9-202ENST00000524523 PRKRIP1Q9H875 184 aaPredicted RBP10.33□□□□□ -0.76
CTR9-202ENST00000524523 VPS9D1Q9Y2B5 631 aa10.33□□□□□ -0.76
CTR9-202ENST00000524523 NRXN1Q9ULB1 1477 aa10.33□□□□□ -0.76
CTR9-202ENST00000524523 ZFYVE9O95405 1425 aa10.33□□□□□ -0.76
CTR9-202ENST00000524523 EIF3AQ14152 1382 aaKnown RBP10.32□□□□□ -0.76
CTR9-202ENST00000524523 COL9A1P20849 921 aa10.32□□□□□ -0.76
CTR9-202ENST00000524523 KIAA1210Q9ULL0 1709 aa10.32□□□□□ -0.76
CTR9-202ENST00000524523 CLTCL1P53675 1640 aa10.32□□□□□ -0.76
CTR9-202ENST00000524523 YEATS2Q9ULM3 1422 aa10.32□□□□□ -0.76
CTR9-202ENST00000524523 TMF1P82094 1093 aa10.31□□□□□ -0.76
CTR9-202ENST00000524523 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
CTR9-202ENST00000524523 NBPF1Q3BBV0 1214 aa10.31□□□□□ -0.76
CTR9-202ENST00000524523 SMYD5Q6GMV2 418 aa10.31□□□□□ -0.76
CTR9-202ENST00000524523 TESK2Q96S53 571 aa10.31□□□□□ -0.76
CTR9-202ENST00000524523 PPRC1Q5VV67 1664 aaKnown RBP10.31□□□□□ -0.76
CTR9-202ENST00000524523 SCAF11Q99590 1463 aaKnown RBP10.3□□□□□ -0.76
CTR9-202ENST00000524523 PUS7Q96PZ0 661 aaKnown RBP10.3□□□□□ -0.76
CTR9-202ENST00000524523 SBNO2Q9Y2G9 1366 aa10.29□□□□□ -0.76
CTR9-202ENST00000524523 ADGRB3O60242 1522 aa10.29□□□□□ -0.76
CTR9-202ENST00000524523 HRO43593 1189 aa10.29□□□□□ -0.76
CTR9-202ENST00000524523 PRKCSHP14314 528 aaPredicted RBP10.29□□□□□ -0.76
CTR9-202ENST00000524523 PRIM1P49642 420 aaKnown RBP10.29□□□□□ -0.76
CTR9-202ENST00000524523 RALBP1Q15311 655 aa10.29□□□□□ -0.76
CTR9-202ENST00000524523 CERKQ8TCT0 537 aa10.29□□□□□ -0.76
CTR9-202ENST00000524523 C14orf93Q9H972 538 aaKnown RBP10.29□□□□□ -0.76
CTR9-202ENST00000524523 MADDQ8WXG6 1647 aa10.29□□□□□ -0.76
CTR9-202ENST00000524523 TESPA1A2RU30 521 aaPredicted RBP10.28□□□□□ -0.76
CTR9-202ENST00000524523 SETBP1Q9Y6X0 1596 aa10.27□□□□□ -0.76
CTR9-202ENST00000524523 KIF1BO60333 1816 aa10.27□□□□□ -0.77
CTR9-202ENST00000524523 PIK3C2BO00750 1634 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms