RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 PPP2R1AP30153 589 aa6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 CNGB1Q14028 1251 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 WDR43Q15061 677 aaKnown RBP eCLIP6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 GLIPR1L2Q4G1C9 344 aa6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 PANK3Q9H999 370 aa6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 ISY1Q9ULR0 285 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 ADAMTS8Q9UP79 889 aa6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 KDM2AQ9Y2K7 1162 aa6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 ROBO2Q9HCK4 1378 aa6.34□□□□□ -1.39
CTNNA1-241ENST00000524127 SLC4A3P48751 1232 aa6.34□□□□□ -1.39
CTNNA1-241ENST00000524127 NCBP3Q53F19 620 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-241ENST00000524127 ANTXR1Q9H6X2 564 aa6.34□□□□□ -1.39
CTNNA1-241ENST00000524127 AMOTL2Q9Y2J4 779 aa6.34□□□□□ -1.39
CTNNA1-241ENST00000524127 PIK3R4Q99570 1358 aa6.33□□□□□ -1.4
CTNNA1-241ENST00000524127 ROBO1Q9Y6N7 1651 aa6.33□□□□□ -1.4
CTNNA1-241ENST00000524127 RPGRIP1LQ68CZ1 1315 aa6.33□□□□□ -1.4
CTNNA1-241ENST00000524127 ADGRB1O14514 1584 aa6.33□□□□□ -1.4
CTNNA1-241ENST00000524127 FSD2A1L4K1 749 aa6.33□□□□□ -1.4
CTNNA1-241ENST00000524127 AMER1Q5JTC6 1135 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-241ENST00000524127 CC2D1BQ5T0F9 858 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-241ENST00000524127 PROSER2Q86WR7 435 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-241ENST00000524127 MYOM2P54296 1465 aa6.33□□□□□ -1.4
CTNNA1-241ENST00000524127 KNDC1Q76NI1 1749 aa6.33□□□□□ -1.4
CTNNA1-241ENST00000524127 EIF5BO60841 1220 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-241ENST00000524127 HSPA1LP34931 641 aa6.32□□□□□ -1.4
CTNNA1-241ENST00000524127 CLCN1P35523 988 aa6.32□□□□□ -1.4
CTNNA1-241ENST00000524127 PIP4K2BP78356 416 aa6.32□□□□□ -1.4
CTNNA1-241ENST00000524127 NBPF1Q3BBV0 1214 aa6.32□□□□□ -1.4
CTNNA1-241ENST00000524127 TMEM132EQ6IEE7 984 aa6.32□□□□□ -1.4
CTNNA1-241ENST00000524127 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
CTNNA1-241ENST00000524127 UPF2Q9HAU5 1272 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-241ENST00000524127 KNSTRNQ9Y448 316 aa6.32□□□□□ -1.4
CTNNA1-241ENST00000524127 RGPD8O14715 1765 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-241ENST00000524127 SENP3-EIF4A1A0A087X0R7 540 aa6.31□□□□□ -1.4
CTNNA1-241ENST00000524127 HDGFP51858 240 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-241ENST00000524127 CFAP70Q5T0N1 1121 aa6.31□□□□□ -1.4
CTNNA1-241ENST00000524127 SKAP1Q86WV1 359 aa6.31□□□□□ -1.4
CTNNA1-241ENST00000524127 CLUAP1Q96AJ1 413 aa6.31□□□□□ -1.4
CTNNA1-241ENST00000524127 TBC1D32Q96NH3 1257 aa6.31□□□□□ -1.4
CTNNA1-241ENST00000524127 POGKQ9P215 609 aa6.31□□□□□ -1.4
CTNNA1-241ENST00000524127 TECPR2O15040 1411 aa6.31□□□□□ -1.4
CTNNA1-241ENST00000524127 PTCH1Q13635 1447 aa6.31□□□□□ -1.4
CTNNA1-241ENST00000524127 KIAA1210Q9ULL0 1709 aa6.3□□□□□ -1.4
CTNNA1-241ENST00000524127 GOLGA6L3A6NEY3 463 aa6.3□□□□□ -1.4
CTNNA1-241ENST00000524127 VGFO15240 615 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-241ENST00000524127 RRP9O43818 475 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-241ENST00000524127 PTMSP20962 102 aa6.3□□□□□ -1.4
CTNNA1-241ENST00000524127 RGS3P49796 1198 aa6.3□□□□□ -1.4
CTNNA1-241ENST00000524127 WAPLQ7Z5K2 1190 aa6.3□□□□□ -1.4
CTNNA1-241ENST00000524127 C14orf93Q9H972 538 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-241ENST00000524127 RRAGDQ9NQL2 400 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-241ENST00000524127 MST1RQ04912 1400 aa6.3□□□□□ -1.4
CTNNA1-241ENST00000524127 ADGRL3Q9HAR2 1447 aa6.3□□□□□ -1.4
CTNNA1-241ENST00000524127 CENPJQ9HC77 1338 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 COL16A1Q07092 1604 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 MCM4P33991 863 aa6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 MRE11P49959 708 aa6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 FAM135BQ49AJ0 1406 aa6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 ARHGEF28Q8N1W1 1705 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 PNNQ9H307 717 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 YTHDC2Q9H6S0 1430 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 CHMP5Q9NZZ3 219 aa6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 NCOA3Q9Y6Q9 1424 aa6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 POLR3AO14802 1390 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 ABCC11Q96J66 1382 aa6.29□□□□□ -1.4
CTNNA1-241ENST00000524127 DDX11L8A8MPP1 907 aa6.28□□□□□ -1.4
CTNNA1-241ENST00000524127 TOM1O60784 492 aa6.28□□□□□ -1.4
CTNNA1-241ENST00000524127 IGHDP01880 384 aa6.28□□□□□ -1.4
CTNNA1-241ENST00000524127 XRCC6P12956 609 aaKnown RBP eCLIP6.28□□□□□ -1.4
CTNNA1-241ENST00000524127 DDX17Q92841 729 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-241ENST00000524127 STK26Q9P289 416 aa6.28□□□□□ -1.4
CTNNA1-241ENST00000524127 MSH6P52701 1360 aa6.28□□□□□ -1.4
CTNNA1-241ENST00000524127 NHSL1Q5SYE7 1610 aa6.28□□□□□ -1.4
CTNNA1-241ENST00000524127 USP32Q8NFA0 1604 aa6.28□□□□□ -1.4
CTNNA1-241ENST00000524127 PHLPP1O60346 1717 aa6.28□□□□□ -1.4
CTNNA1-241ENST00000524127 FMN2Q9NZ56 1722 aa6.28□□□□□ -1.4
CTNNA1-241ENST00000524127 MYOM1P52179 1685 aa6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 HSP90AA1P07900 732 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 CCDC27Q2M243 656 aa6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 WDR63Q8IWG1 891 aa6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 TBC1D2Q9BYX2 928 aa6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 RWDD1Q9H446 243 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 C19orf44Q9H6X5 657 aa6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 SLAIN2Q9P270 581 aa6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 CIZ1Q9ULV3 898 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 AHDC1Q5TGY3 1603 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 C1orf167Q5SNV9 1468 aa6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 MED1Q15648 1581 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 CDC42BPGQ6DT37 1551 aa6.27□□□□□ -1.41
CTNNA1-241ENST00000524127 DCCP43146 1447 aa6.26□□□□□ -1.41
CTNNA1-241ENST00000524127 DLC1Q96QB1 1528 aa6.26□□□□□ -1.41
CTNNA1-241ENST00000524127 APAF1O14727 1248 aa6.26□□□□□ -1.41
CTNNA1-241ENST00000524127 BCAR3O75815 825 aa6.26□□□□□ -1.41
CTNNA1-241ENST00000524127 SEC24BO95487 1268 aa6.26□□□□□ -1.41
CTNNA1-241ENST00000524127 TPM2P07951 284 aa6.26□□□□□ -1.41
CTNNA1-241ENST00000524127 CT47B1P0C2W7 299 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-241ENST00000524127 SKOR2Q2VWA4 1001 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-241ENST00000524127 BRINP3Q76B58 766 aa6.26□□□□□ -1.41
CTNNA1-241ENST00000524127 SBNO2Q9Y2G9 1366 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms