RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 CDK11AQ9UQ88 783 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-239ENST00000523685 HECW1Q76N89 1606 aa8.6□□□□□ -1.03
CTNNA1-239ENST00000523685 PLCH2O75038 1416 aa8.6□□□□□ -1.03
CTNNA1-239ENST00000523685 ZMYM4Q5VZL5 1548 aa8.59□□□□□ -1.03
CTNNA1-239ENST00000523685 HRO43593 1189 aa8.59□□□□□ -1.03
CTNNA1-239ENST00000523685 SKIV2LQ15477 1246 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-239ENST00000523685 SAMD7Q7Z3H4 446 aa8.59□□□□□ -1.03
CTNNA1-239ENST00000523685 ZFRQ96KR1 1074 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-239ENST00000523685 PCMTD1Q96MG8 357 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-239ENST00000523685 MAGI2Q86UL8 1455 aa8.58□□□□□ -1.04
CTNNA1-239ENST00000523685 SIGLEC1Q9BZZ2 1709 aa8.58□□□□□ -1.04
CTNNA1-239ENST00000523685 NUTM1Q86Y26 1132 aa8.58□□□□□ -1.04
CTNNA1-239ENST00000523685 SLF2Q8IX21 1173 aa8.58□□□□□ -1.04
CTNNA1-239ENST00000523685 AFAP1Q8N556 730 aa8.58□□□□□ -1.04
CTNNA1-239ENST00000523685 TBC1D2Q9BYX2 928 aa8.58□□□□□ -1.04
CTNNA1-239ENST00000523685 ATP10AO60312 1499 aa8.57□□□□□ -1.04
CTNNA1-239ENST00000523685 C9orf84Q5VXU9 1444 aa8.57□□□□□ -1.04
CTNNA1-239ENST00000523685 FMN1Q68DA7 1419 aa8.57□□□□□ -1.04
CTNNA1-239ENST00000523685 SLC10A3P09131 477 aa8.57□□□□□ -1.04
CTNNA1-239ENST00000523685 SPIRE2Q8WWL2 714 aa8.57□□□□□ -1.04
CTNNA1-239ENST00000523685 ARHGAP5Q13017 1502 aa8.56□□□□□ -1.04
CTNNA1-239ENST00000523685 MYSM1Q5VVJ2 828 aa8.56□□□□□ -1.04
CTNNA1-239ENST00000523685 POLR3EQ9NVU0 708 aa8.56□□□□□ -1.04
CTNNA1-239ENST00000523685 ARHGAP35Q9NRY4 1499 aa8.56□□□□□ -1.04
CTNNA1-239ENST00000523685 GOLGA8CPA6NN73 597 aa8.55□□□□□ -1.04
CTNNA1-239ENST00000523685 GCGRP47871 477 aa8.55□□□□□ -1.04
CTNNA1-239ENST00000523685 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
CTNNA1-239ENST00000523685 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
CTNNA1-239ENST00000523685 FER1L4A9Z1Z3 1794 aa8.55□□□□□ -1.04
CTNNA1-239ENST00000523685 CLIP1P30622 1438 aa8.54□□□□□ -1.04
CTNNA1-239ENST00000523685 TROQ12816 1431 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-239ENST00000523685 KIF14Q15058 1648 aa8.54□□□□□ -1.04
CTNNA1-239ENST00000523685 KDM4AO75164 1064 aa8.54□□□□□ -1.04
CTNNA1-239ENST00000523685 LRCH3Q96II8 777 aa8.54□□□□□ -1.04
CTNNA1-239ENST00000523685 ESF1Q9H501 851 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-239ENST00000523685 ARHGEF12Q9NZN5 1544 aa8.54□□□□□ -1.04
CTNNA1-239ENST00000523685 ZNF518AQ6AHZ1 1483 aa8.53□□□□□ -1.04
CTNNA1-239ENST00000523685 RNF40O75150 1001 aa8.53□□□□□ -1.04
CTNNA1-239ENST00000523685 POTEGQ6S5H5 508 aa8.53□□□□□ -1.04
CTNNA1-239ENST00000523685 ERICH6Q7L0X2 663 aa8.53□□□□□ -1.04
CTNNA1-239ENST00000523685 RIC3Q7Z5B4 369 aa8.53□□□□□ -1.04
CTNNA1-239ENST00000523685 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-239ENST00000523685 MYO5CQ9NQX4 1742 aa8.53□□□□□ -1.04
CTNNA1-239ENST00000523685 CLK2P49760 499 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-239ENST00000523685 USP46P62068 366 aa8.52□□□□□ -1.05
CTNNA1-239ENST00000523685 PROCA1Q8NCQ7 364 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-239ENST00000523685 ANKK1Q8NFD2 765 aa8.52□□□□□ -1.05
CTNNA1-239ENST00000523685 ZNF777Q9ULD5 760 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-239ENST00000523685 UHRF1BP1Q6BDS2 1440 aa8.52□□□□□ -1.05
CTNNA1-239ENST00000523685 POTEMA6NI47 508 aa8.51□□□□□ -1.05
CTNNA1-239ENST00000523685 CDAN1Q8IWY9 1227 aa8.51□□□□□ -1.05
CTNNA1-239ENST00000523685 NECTIN2Q92692 538 aa8.51□□□□□ -1.05
CTNNA1-239ENST00000523685 MOXD2PA6NHM9 499 aa8.5□□□□□ -1.05
CTNNA1-239ENST00000523685 SPTLC1O15269 473 aa8.5□□□□□ -1.05
CTNNA1-239ENST00000523685 CFHP08603 1231 aa8.5□□□□□ -1.05
CTNNA1-239ENST00000523685 GJA5P36382 358 aa8.5□□□□□ -1.05
CTNNA1-239ENST00000523685 TRAPPC8Q9Y2L5 1435 aa8.5□□□□□ -1.05
CTNNA1-239ENST00000523685 DIP2CQ9Y2E4 1556 aa8.49□□□□□ -1.05
CTNNA1-239ENST00000523685 SOWAHBA6NEL2 793 aa8.49□□□□□ -1.05
CTNNA1-239ENST00000523685 NDUFV2P19404 249 aa8.49□□□□□ -1.05
CTNNA1-239ENST00000523685 RSBN1LQ6PCB5 846 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-239ENST00000523685 WNT2BQ93097 391 aa8.49□□□□□ -1.05
CTNNA1-239ENST00000523685 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.49□□□□□ -1.05
CTNNA1-239ENST00000523685 LIMD1Q9UGP4 676 aa8.49□□□□□ -1.05
CTNNA1-239ENST00000523685 PREX1Q8TCU6 1659 aa8.49□□□□□ -1.05
CTNNA1-239ENST00000523685 DISP3Q9P2K9 1392 aa8.48□□□□□ -1.05
CTNNA1-239ENST00000523685 KDM5CP41229 1560 aa8.48□□□□□ -1.05
CTNNA1-239ENST00000523685 PPP4CP60510 307 aa8.48□□□□□ -1.05
CTNNA1-239ENST00000523685 TUSC1Q2TAM9 212 aa8.48□□□□□ -1.05
CTNNA1-239ENST00000523685 KMT5BQ4FZB7 885 aa8.48□□□□□ -1.05
CTNNA1-239ENST00000523685 GRIPAP1Q4V328 841 aa8.48□□□□□ -1.05
CTNNA1-239ENST00000523685 ABCA6Q8N139 1617 aa8.47□□□□□ -1.05
CTNNA1-239ENST00000523685 CASKIN1Q8WXD9 1431 aa8.47□□□□□ -1.05
CTNNA1-239ENST00000523685 MLH3Q9UHC1 1453 aa8.47□□□□□ -1.05
CTNNA1-239ENST00000523685 HOXA2O43364 376 aa8.47□□□□□ -1.05
CTNNA1-239ENST00000523685 HNRNPMP52272 730 aaKnown RBP eCLIP8.47□□□□□ -1.05
CTNNA1-239ENST00000523685 C14orf37Q86TY3 774 aa8.47□□□□□ -1.05
CTNNA1-239ENST00000523685 TIMELESSQ9UNS1 1208 aa8.47□□□□□ -1.05
CTNNA1-239ENST00000523685 LRRIQ1Q96JM4 1722 aa8.46□□□□□ -1.05
CTNNA1-239ENST00000523685 CCDC18Q5T9S5 1454 aa8.46□□□□□ -1.05
CTNNA1-239ENST00000523685 ABCC1P33527 1531 aa8.46□□□□□ -1.05
CTNNA1-239ENST00000523685 BCAMP50895 628 aa8.46□□□□□ -1.06
CTNNA1-239ENST00000523685 FUT2Q10981 343 aa8.46□□□□□ -1.06
CTNNA1-239ENST00000523685 TSR3Q9UJK0 312 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-239ENST00000523685 HPS5Q9UPZ3 1129 aa8.46□□□□□ -1.06
CTNNA1-239ENST00000523685 CDC42BPBQ9Y5S2 1711 aa8.46□□□□□ -1.06
CTNNA1-239ENST00000523685 PREX2Q70Z35 1606 aa8.45□□□□□ -1.06
CTNNA1-239ENST00000523685 FDX1P10109 184 aa8.45□□□□□ -1.06
CTNNA1-239ENST00000523685 ATP6V1AP38606 617 aa8.45□□□□□ -1.06
CTNNA1-239ENST00000523685 CSPP1Q1MSJ5 1256 aa8.45□□□□□ -1.06
CTNNA1-239ENST00000523685 PRR14Q9BWN1 585 aa8.45□□□□□ -1.06
CTNNA1-239ENST00000523685 PCDHB15Q9Y5E8 787 aa8.45□□□□□ -1.06
CTNNA1-239ENST00000523685 SPAG9O60271 1321 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-239ENST00000523685 STRCQ7RTU9 1775 aa8.45□□□□□ -1.06
CTNNA1-239ENST00000523685 ACTN4O43707 911 aaKnown RBP8.44□□□□□ -1.06
CTNNA1-239ENST00000523685 ILDR2Q71H61 639 aa8.44□□□□□ -1.06
CTNNA1-239ENST00000523685 CFDP1Q9UEE9 299 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-239ENST00000523685 PTPRTO14522 1441 aa8.44□□□□□ -1.06
CTNNA1-239ENST00000523685 AGLP35573 1532 aa8.44□□□□□ -1.06
CTNNA1-239ENST00000523685 REREQ9P2R6 1566 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms