RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 TTC21AQ8NDW8 1320 aa35.13■■■■□ 3.21
NKX2-1-204ENST00000522719 PXDNQ92626 1479 aa35.12■■■■□ 3.21
NKX2-1-204ENST00000522719 NPC1L1Q9UHC9 1359 aa35.12■■■■□ 3.21
NKX2-1-204ENST00000522719 AHDC1Q5TGY3 1603 aaPredicted RBP35.12■■■■□ 3.21
NKX2-1-204ENST00000522719 PIP4K2BP78356 416 aa35.11■■■■□ 3.21
NKX2-1-204ENST00000522719 DIEXFQ68CQ4 756 aaKnown RBP35.11■■■■□ 3.21
NKX2-1-204ENST00000522719 AMER1Q5JTC6 1135 aaPredicted RBP35.1■■■■□ 3.21
NKX2-1-204ENST00000522719 FBXO41Q8TF61 875 aa35.1■■■■□ 3.21
NKX2-1-204ENST00000522719 SOS2Q07890 1332 aaPredicted RBP35.08■■■■□ 3.21
NKX2-1-204ENST00000522719 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.08■■■■□ 3.21
NKX2-1-204ENST00000522719 DDX17Q92841 729 aaKnown RBP35.08■■■■□ 3.21
NKX2-1-204ENST00000522719 SBNO1A3KN83 1393 aa35.08■■■■□ 3.21
NKX2-1-204ENST00000522719 NSD2O96028 1365 aa35.08■■■■□ 3.21
NKX2-1-204ENST00000522719 XPCQ01831 940 aaPredicted RBP35.06■■■■□ 3.2
NKX2-1-204ENST00000522719 SCAF1Q9H7N4 1312 aaKnown RBP35.06■■■■□ 3.2
NKX2-1-204ENST00000522719 ANKRD26Q9UPS8 1709 aa35.06■■■■□ 3.2
NKX2-1-204ENST00000522719 PAK3O75914 559 aaPredicted RBP35.05■■■■□ 3.2
NKX2-1-204ENST00000522719 FYB1O15117 783 aa35.04■■■■□ 3.2
NKX2-1-204ENST00000522719 ALS2Q96Q42 1657 aa35.03■■■■□ 3.2
NKX2-1-204ENST00000522719 PIK3C2AO00443 1686 aa35.03■■■■□ 3.2
NKX2-1-204ENST00000522719 PHLPP1O60346 1717 aa35.02■■■■□ 3.2
NKX2-1-204ENST00000522719 USP54Q70EL1 1684 aa35■■■■□ 3.19
NKX2-1-204ENST00000522719 NME9Q86XW9 330 aa34.99■■■■□ 3.19
NKX2-1-204ENST00000522719 TNS3Q68CZ2 1445 aa34.99■■■■□ 3.19
NKX2-1-204ENST00000522719 CC2D1BQ5T0F9 858 aaKnown RBP34.98■■■■□ 3.19
NKX2-1-204ENST00000522719 ABTB2Q8N961 1025 aa34.98■■■■□ 3.19
NKX2-1-204ENST00000522719 USP31Q70CQ4 1352 aa34.98■■■■□ 3.19
NKX2-1-204ENST00000522719 SPATA31A3Q5VYP0 1347 aa34.97■■■■□ 3.19
NKX2-1-204ENST00000522719 GGNBP2Q9H3C7 697 aa34.96■■■■□ 3.19
NKX2-1-204ENST00000522719 ANP32CO43423 234 aa34.95■■■■□ 3.19
NKX2-1-204ENST00000522719 COL16A1Q07092 1604 aaPredicted RBP34.95■■■■□ 3.18
NKX2-1-204ENST00000522719 ARHGEF10O15013 1369 aa34.95■■■■□ 3.18
NKX2-1-204ENST00000522719 COG3Q96JB2 828 aa34.94■■■■□ 3.18
NKX2-1-204ENST00000522719 LRRC59Q96AG4 307 aaKnown RBP34.93■■■■□ 3.18
NKX2-1-204ENST00000522719 OVOS2A0A0J9YW53 1432 aa34.93■■■■□ 3.18
NKX2-1-204ENST00000522719 OVOS2Q6IE36 1432 aa34.93■■■■□ 3.18
NKX2-1-204ENST00000522719 MARF1Q9Y4F3 1742 aaKnown RBP34.92■■■■□ 3.18
NKX2-1-204ENST00000522719 NLRP6P59044 892 aa34.92■■■■□ 3.18
NKX2-1-204ENST00000522719 RALBP1Q15311 655 aa34.91■■■■□ 3.18
NKX2-1-204ENST00000522719 NLRP13Q86W25 1043 aa34.91■■■■□ 3.18
NKX2-1-204ENST00000522719 PARD3Q8TEW0 1356 aa34.91■■■■□ 3.18
NKX2-1-204ENST00000522719 LMOD2Q6P5Q4 547 aa34.9■■■■□ 3.18
NKX2-1-204ENST00000522719 MORC1Q86VD1 984 aa34.9■■■■□ 3.18
NKX2-1-204ENST00000522719 PRKRIP1Q9H875 184 aaPredicted RBP34.9■■■■□ 3.18
NKX2-1-204ENST00000522719 ZRANB1Q9UGI0 708 aa34.89■■■■□ 3.18
NKX2-1-204ENST00000522719 CNGB1Q14028 1251 aaPredicted RBP34.89■■■■□ 3.18
NKX2-1-204ENST00000522719 NUTM2GQ5VZR2 741 aa34.86■■■■□ 3.17
NKX2-1-204ENST00000522719 MED1Q15648 1581 aaPredicted RBP34.85■■■■□ 3.17
NKX2-1-204ENST00000522719 USP19O94966 1318 aa34.83■■■■□ 3.17
NKX2-1-204ENST00000522719 SLIT3O75094 1523 aa34.81■■■■□ 3.16
NKX2-1-204ENST00000522719 CRYBG1Q9Y4K1 1723 aa34.81■■■■□ 3.16
NKX2-1-204ENST00000522719 COL22A1Q8NFW1 1626 aaPredicted RBP34.81■■■■□ 3.16
NKX2-1-204ENST00000522719 MAP2P11137 1827 aaKnown RBP34.79■■■■□ 3.16
NKX2-1-204ENST00000522719 AATKQ6ZMQ8 1374 aa34.78■■■■□ 3.16
NKX2-1-204ENST00000522719 KCNH5Q8NCM2 988 aa34.78■■■■□ 3.16
NKX2-1-204ENST00000522719 PHRF1Q9P1Y6 1649 aaKnown RBP34.78■■■■□ 3.16
NKX2-1-204ENST00000522719 PNPLA6Q8IY17 1366 aa34.77■■■■□ 3.16
NKX2-1-204ENST00000522719 SHPRHQ149N8 1683 aa34.76■■■■□ 3.16
NKX2-1-204ENST00000522719 MYBBP1AQ9BQG0 1328 aaKnown RBP34.76■■■■□ 3.15
NKX2-1-204ENST00000522719 ABCA3Q99758 1704 aa34.75■■■■□ 3.15
NKX2-1-204ENST00000522719 TNNT2P45379 298 aaPredicted RBP34.74■■■■□ 3.15
NKX2-1-204ENST00000522719 HSPA1LP34931 641 aa34.73■■■■□ 3.15
NKX2-1-204ENST00000522719 NFAT5O94916 1531 aa34.72■■■■□ 3.15
NKX2-1-204ENST00000522719 GCP02774 474 aa34.72■■■■□ 3.15
NKX2-1-204ENST00000522719 PPP2R1AP30153 589 aa34.72■■■■□ 3.15
NKX2-1-204ENST00000522719 JCADQ9P266 1359 aa34.71■■■■□ 3.15
NKX2-1-204ENST00000522719 LTN1O94822 1766 aa34.68■■■■□ 3.14
NKX2-1-204ENST00000522719 MIER1Q8N108 512 aa34.68■■■■□ 3.14
NKX2-1-204ENST00000522719 CABLES1Q8TDN4 633 aa34.68■■■■□ 3.14
NKX2-1-204ENST00000522719 SOX12O15370 315 aa34.66■■■■□ 3.14
NKX2-1-204ENST00000522719 PLEKHG5O94827 1062 aa34.65■■■■□ 3.14
NKX2-1-204ENST00000522719 FBLN1P23142 703 aa34.65■■■■□ 3.14
NKX2-1-204ENST00000522719 SMG6Q86US8 1419 aaKnown RBP34.65■■■■□ 3.14
NKX2-1-204ENST00000522719 POLKQ9UBT6 870 aa34.64■■■■□ 3.14
NKX2-1-204ENST00000522719 HAP1P54257 671 aaPredicted RBP34.64■■■■□ 3.14
NKX2-1-204ENST00000522719 KIF24Q5T7B8 1368 aa34.62■■■■□ 3.13
NKX2-1-204ENST00000522719 MTHFSP49914 203 aa34.62■■■■□ 3.13
NKX2-1-204ENST00000522719 RRS1Q15050 365 aaKnown RBP34.62■■■■□ 3.13
NKX2-1-204ENST00000522719 CPDO75976 1380 aa34.61■■■■□ 3.13
NKX2-1-204ENST00000522719 MAP3K19Q56UN5 1328 aa34.6■■■■□ 3.13
NKX2-1-204ENST00000522719 ARHGEF25Q86VW2 580 aa34.6■■■■□ 3.13
NKX2-1-204ENST00000522719 CCER2I3L3R5 266 aa34.59■■■■□ 3.13
NKX2-1-204ENST00000522719 EMILIN1Q9Y6C2 1016 aa34.59■■■■□ 3.13
NKX2-1-204ENST00000522719 SPATA31A6Q5VVP1 1343 aa34.58■■■■□ 3.13
NKX2-1-204ENST00000522719 RTL1A6NKG5 1358 aa34.57■■■■□ 3.12
NKX2-1-204ENST00000522719 CDK12Q9NYV4 1490 aaPredicted RBP34.57■■■■□ 3.12
NKX2-1-204ENST00000522719 PEAK1Q9H792 1746 aa34.57■■■■□ 3.12
NKX2-1-204ENST00000522719 ZC3H6P61129 1189 aaKnown RBP34.56■■■■□ 3.12
NKX2-1-204ENST00000522719 ABCC6O95255 1503 aa34.55■■■■□ 3.12
NKX2-1-204ENST00000522719 FLT4P35916 1363 aa34.55■■■■□ 3.12
NKX2-1-204ENST00000522719 PPM1GO15355 546 aaPredicted RBP34.55■■■■□ 3.12
NKX2-1-204ENST00000522719 AMPHP49418 695 aa34.55■■■■□ 3.12
NKX2-1-204ENST00000522719 INSRP06213 1382 aa34.54■■■■□ 3.12
NKX2-1-204ENST00000522719 CFAP53Q96M91 514 aa34.54■■■■□ 3.12
NKX2-1-204ENST00000522719 KIAA0232Q92628 1395 aa34.53■■■■□ 3.12
NKX2-1-204ENST00000522719 COL18A1P39060 1754 aa34.52■■■■□ 3.12
NKX2-1-204ENST00000522719 IP6K1Q92551 441 aa34.51■■■■□ 3.12
NKX2-1-204ENST00000522719 HOXC9P31274 260 aa34.49■■■■□ 3.11
NKX2-1-204ENST00000522719 PRDM11Q9NQV5 511 aa34.49■■■■□ 3.11
NKX2-1-204ENST00000522719 COL14A1Q05707 1796 aaKnown RBP34.47■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms