RNA–Protein interactions for RNA: ENST00000522297.1

POLB-212, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-212ENST00000522297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.34
POLB-212ENST00000522297 OCEL1Q9H607 264 aa12.92□□□□□ -0.34
POLB-212ENST00000522297 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
POLB-212ENST00000522297 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
POLB-212ENST00000522297 HRCP23327 699 aa12.9□□□□□ -0.34
POLB-212ENST00000522297 MS4A4AQ96JQ5 239 aa12.9□□□□□ -0.34
POLB-212ENST00000522297 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
POLB-212ENST00000522297 BRINP3Q76B58 766 aa12.89□□□□□ -0.35
POLB-212ENST00000522297 METRNQ9UJH8 293 aa12.89□□□□□ -0.35
POLB-212ENST00000522297 KIF1BO60333 1816 aa12.88□□□□□ -0.35
POLB-212ENST00000522297 PDCD7Q8N8D1 485 aaKnown RBP12.88□□□□□ -0.35
POLB-212ENST00000522297 ANKRD30BQ9BXX2 1392 aa12.88□□□□□ -0.35
POLB-212ENST00000522297 ROBO2Q9HCK4 1378 aa12.88□□□□□ -0.35
POLB-212ENST00000522297 ROBO1Q9Y6N7 1651 aa12.87□□□□□ -0.35
POLB-212ENST00000522297 TMEM132EQ6IEE7 984 aa12.87□□□□□ -0.35
POLB-212ENST00000522297 POTEAQ6S8J7 498 aa12.87□□□□□ -0.35
POLB-212ENST00000522297 STK26Q9P289 416 aa12.87□□□□□ -0.35
POLB-212ENST00000522297 SEC24BO95487 1268 aa12.86□□□□□ -0.35
POLB-212ENST00000522297 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
POLB-212ENST00000522297 PLCG2P16885 1265 aa12.85□□□□□ -0.35
POLB-212ENST00000522297 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
POLB-212ENST00000522297 DCCP43146 1447 aa12.85□□□□□ -0.35
POLB-212ENST00000522297 SETD1AO15047 1707 aaKnown RBP12.85□□□□□ -0.35
POLB-212ENST00000522297 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
POLB-212ENST00000522297 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.85□□□□□ -0.35
POLB-212ENST00000522297 SRCAPQ6ZRS2 3230 aa12.84□□□□□ -0.35
POLB-212ENST00000522297 JCADQ9P266 1359 aa12.84□□□□□ -0.35
POLB-212ENST00000522297 WAPLQ7Z5K2 1190 aa12.84□□□□□ -0.35
POLB-212ENST00000522297 ADGRL3Q9HAR2 1447 aa12.84□□□□□ -0.35
POLB-212ENST00000522297 MST1RQ04912 1400 aa12.83□□□□□ -0.36
POLB-212ENST00000522297 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
POLB-212ENST00000522297 CFAP70Q5T0N1 1121 aa12.83□□□□□ -0.36
POLB-212ENST00000522297 DDX17Q92841 729 aaKnown RBP12.83□□□□□ -0.36
POLB-212ENST00000522297 C14orf93Q9H972 538 aaKnown RBP12.83□□□□□ -0.36
POLB-212ENST00000522297 PTCH1Q13635 1447 aa12.82□□□□□ -0.36
POLB-212ENST00000522297 ORAI2Q96SN7 254 aa12.82□□□□□ -0.36
POLB-212ENST00000522297 PPP1R37O75864 691 aa12.81□□□□□ -0.36
POLB-212ENST00000522297 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
POLB-212ENST00000522297 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
POLB-212ENST00000522297 ABCC11Q96J66 1382 aa12.81□□□□□ -0.36
POLB-212ENST00000522297 PPLO60437 1756 aa12.8□□□□□ -0.36
POLB-212ENST00000522297 DCAF11Q8TEB1 546 aa12.8□□□□□ -0.36
POLB-212ENST00000522297 LRRC59Q96AG4 307 aaKnown RBP12.8□□□□□ -0.36
POLB-212ENST00000522297 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
POLB-212ENST00000522297 PRAG1Q86YV5 1406 aa12.79□□□□□ -0.36
POLB-212ENST00000522297 DPY19L2Q6NUT2 758 aa12.79□□□□□ -0.36
POLB-212ENST00000522297 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
POLB-212ENST00000522297 NUTM2BA6NNL0 878 aaPredicted RBP12.78□□□□□ -0.36
POLB-212ENST00000522297 NUTM2EB1AL46 878 aaPredicted RBP12.78□□□□□ -0.36
POLB-212ENST00000522297 NUTM2AQ8IVF1 878 aaPredicted RBP12.78□□□□□ -0.36
POLB-212ENST00000522297 SIRT1Q96EB6 747 aa12.78□□□□□ -0.36
POLB-212ENST00000522297 PHLPP1O60346 1717 aa12.78□□□□□ -0.36
POLB-212ENST00000522297 SPATA31A6Q5VVP1 1343 aa12.78□□□□□ -0.36
POLB-212ENST00000522297 PLEKHH1Q9ULM0 1364 aa12.78□□□□□ -0.36
POLB-212ENST00000522297 NUTM2FA1L443 756 aa12.77□□□□□ -0.37
POLB-212ENST00000522297 ESCO1Q5FWF5 840 aa12.77□□□□□ -0.37
POLB-212ENST00000522297 DHX57Q6P158 1386 aaKnown RBP12.77□□□□□ -0.37
POLB-212ENST00000522297 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
POLB-212ENST00000522297 ASXL1Q8IXJ9 1541 aa12.77□□□□□ -0.37
POLB-212ENST00000522297 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
POLB-212ENST00000522297 L3MBTL3Q96JM7 780 aaPredicted RBP12.76□□□□□ -0.37
POLB-212ENST00000522297 TECPR2O15040 1411 aa12.76□□□□□ -0.37
POLB-212ENST00000522297 NRXN1Q9ULB1 1477 aa12.76□□□□□ -0.37
POLB-212ENST00000522297 COL16A1Q07092 1604 aaPredicted RBP12.76□□□□□ -0.37
POLB-212ENST00000522297 AHDC1Q5TGY3 1603 aaPredicted RBP12.76□□□□□ -0.37
POLB-212ENST00000522297 SAFB2Q14151 953 aaKnown RBP eCLIP12.75□□□□□ -0.37
POLB-212ENST00000522297 STAC3Q96MF2 364 aa12.75□□□□□ -0.37
POLB-212ENST00000522297 PRAM1Q96QH2 718 aa12.74□□□□□ -0.37
POLB-212ENST00000522297 MYOM2P54296 1465 aa12.73□□□□□ -0.37
POLB-212ENST00000522297 SOS2Q07890 1332 aaPredicted RBP12.73□□□□□ -0.37
POLB-212ENST00000522297 FOXO3O43524 673 aa12.73□□□□□ -0.37
POLB-212ENST00000522297 POGKQ9P215 609 aa12.73□□□□□ -0.37
POLB-212ENST00000522297 TRAK1Q9UPV9 953 aa12.73□□□□□ -0.37
POLB-212ENST00000522297 NALCNQ8IZF0 1738 aa12.73□□□□□ -0.37
POLB-212ENST00000522297 UPF1Q92900 1129 aaKnown RBP eCLIP12.72□□□□□ -0.37
POLB-212ENST00000522297 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
POLB-212ENST00000522297 BOLA1Q9Y3E2 137 aa12.72□□□□□ -0.37
POLB-212ENST00000522297 LRP6O75581 1613 aa12.72□□□□□ -0.37
POLB-212ENST00000522297 IFT172Q9UG01 1749 aa12.71□□□□□ -0.37
POLB-212ENST00000522297 XPCQ01831 940 aaPredicted RBP12.71□□□□□ -0.37
POLB-212ENST00000522297 PNPLA6Q8IY17 1366 aa12.7□□□□□ -0.38
POLB-212ENST00000522297 ZNF772Q68DY9 489 aaPredicted RBP12.7□□□□□ -0.38
POLB-212ENST00000522297 NPHP3Q7Z494 1330 aa12.69□□□□□ -0.38
POLB-212ENST00000522297 ADAMTS2O95450 1211 aa12.69□□□□□ -0.38
POLB-212ENST00000522297 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
POLB-212ENST00000522297 MICALL2Q8IY33 904 aa12.69□□□□□ -0.38
POLB-212ENST00000522297 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
POLB-212ENST00000522297 G3V3G9 751 aa12.68□□□□□ -0.38
POLB-212ENST00000522297 C8orf37Q96NL8 207 aa12.68□□□□□ -0.38
POLB-212ENST00000522297 HIRIP3Q9BW71 556 aaPredicted RBP12.68□□□□□ -0.38
POLB-212ENST00000522297 AFF2P51816 1311 aa12.67□□□□□ -0.38
POLB-212ENST00000522297 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
POLB-212ENST00000522297 NGLY1Q96IV0 654 aa12.67□□□□□ -0.38
POLB-212ENST00000522297 NHSL1Q5SYE7 1610 aa12.66□□□□□ -0.38
POLB-212ENST00000522297 MINK1Q8N4C8 1332 aaPredicted RBP12.66□□□□□ -0.38
POLB-212ENST00000522297 CDC42BPGQ6DT37 1551 aa12.66□□□□□ -0.38
POLB-212ENST00000522297 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
POLB-212ENST00000522297 SIN3AQ96ST3 1273 aa12.66□□□□□ -0.38
POLB-212ENST00000522297 ADGRB1O14514 1584 aa12.65□□□□□ -0.38
POLB-212ENST00000522297 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms