RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 XPCQ01831 940 aaPredicted RBP20.45■□□□□ 0.86
SREK1-209ENST00000520953 CADPS2Q86UW7 1296 aa20.45■□□□□ 0.86
SREK1-209ENST00000520953 KIF20BQ96Q89 1820 aa20.44■□□□□ 0.86
SREK1-209ENST00000520953 MYBBP1AQ9BQG0 1328 aaKnown RBP20.44■□□□□ 0.86
SREK1-209ENST00000520953 DDX17Q92841 729 aaKnown RBP20.44■□□□□ 0.86
SREK1-209ENST00000520953 ZNF692Q9BU19 519 aaPredicted RBP20.44■□□□□ 0.86
SREK1-209ENST00000520953 SSH2Q76I76 1423 aa20.44■□□□□ 0.86
SREK1-209ENST00000520953 TTC21BQ7Z4L5 1316 aa20.44■□□□□ 0.86
SREK1-209ENST00000520953 FOXO3O43524 673 aa20.44■□□□□ 0.86
SREK1-209ENST00000520953 MORC1Q86VD1 984 aa20.43■□□□□ 0.86
SREK1-209ENST00000520953 PPP2R1AP30153 589 aa20.42■□□□□ 0.86
SREK1-209ENST00000520953 FBLN1P23142 703 aa20.42■□□□□ 0.86
SREK1-209ENST00000520953 MRS2Q9HD23 443 aa20.41■□□□□ 0.86
SREK1-209ENST00000520953 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.85
SREK1-209ENST00000520953 NSD2O96028 1365 aa20.38■□□□□ 0.85
SREK1-209ENST00000520953 NUTM2GQ5VZR2 741 aa20.38■□□□□ 0.85
SREK1-209ENST00000520953 SLAIN2Q9P270 581 aa20.38■□□□□ 0.85
SREK1-209ENST00000520953 PAK3O75914 559 aaPredicted RBP20.37■□□□□ 0.85
SREK1-209ENST00000520953 PSME1Q06323 249 aa20.37■□□□□ 0.85
SREK1-209ENST00000520953 BRINP3Q76B58 766 aa20.37■□□□□ 0.85
SREK1-209ENST00000520953 PIK3C2AO00443 1686 aa20.37■□□□□ 0.85
SREK1-209ENST00000520953 NLRP13Q86W25 1043 aa20.36■□□□□ 0.85
SREK1-209ENST00000520953 GTF3C3Q9Y5Q9 886 aa20.36■□□□□ 0.85
SREK1-209ENST00000520953 KIF1AQ12756 1690 aa20.36■□□□□ 0.85
SREK1-209ENST00000520953 BRD4O60885 1362 aaPredicted RBP20.34■□□□□ 0.85
SREK1-209ENST00000520953 OVOS2A0A0J9YW53 1432 aa20.33■□□□□ 0.85
SREK1-209ENST00000520953 OVOS2Q6IE36 1432 aa20.33■□□□□ 0.85
SREK1-209ENST00000520953 KRT28Q7Z3Y7 464 aa20.33■□□□□ 0.85
SREK1-209ENST00000520953 TRPM3Q9HCF6 1732 aaPredicted RBP20.32■□□□□ 0.84
SREK1-209ENST00000520953 MARF1Q9Y4F3 1742 aaKnown RBP20.32■□□□□ 0.84
SREK1-209ENST00000520953 TTC21AQ8NDW8 1320 aa20.32■□□□□ 0.84
SREK1-209ENST00000520953 SOX12O15370 315 aa20.32■□□□□ 0.84
SREK1-209ENST00000520953 PLEKHG5O94827 1062 aa20.32■□□□□ 0.84
SREK1-209ENST00000520953 FAM9BQ8IZU0 186 aa20.32■□□□□ 0.84
SREK1-209ENST00000520953 COG3Q96JB2 828 aa20.32■□□□□ 0.84
SREK1-209ENST00000520953 MTHFSP49914 203 aa20.31■□□□□ 0.84
SREK1-209ENST00000520953 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
SREK1-209ENST00000520953 NLRP6P59044 892 aa20.29■□□□□ 0.84
SREK1-209ENST00000520953 PNISRQ8TF01 805 aaKnown RBP20.29■□□□□ 0.84
SREK1-209ENST00000520953 RRS1Q15050 365 aaKnown RBP20.28■□□□□ 0.84
SREK1-209ENST00000520953 PXDNQ92626 1479 aa20.28■□□□□ 0.84
SREK1-209ENST00000520953 LMOD2Q6P5Q4 547 aa20.28■□□□□ 0.84
SREK1-209ENST00000520953 EMILIN1Q9Y6C2 1016 aa20.27■□□□□ 0.84
SREK1-209ENST00000520953 USP31Q70CQ4 1352 aa20.27■□□□□ 0.84
SREK1-209ENST00000520953 NPHP3Q7Z494 1330 aa20.26■□□□□ 0.83
SREK1-209ENST00000520953 MAP2P11137 1827 aaKnown RBP20.26■□□□□ 0.83
SREK1-209ENST00000520953 SENP3-EIF4A1A0A087X0R7 540 aa20.26■□□□□ 0.83
SREK1-209ENST00000520953 POLKQ9UBT6 870 aa20.26■□□□□ 0.83
SREK1-209ENST00000520953 PPM1GO15355 546 aaPredicted RBP20.25■□□□□ 0.83
SREK1-209ENST00000520953 ROBO1Q9Y6N7 1651 aa20.24■□□□□ 0.83
SREK1-209ENST00000520953 ALS2Q96Q42 1657 aa20.24■□□□□ 0.83
SREK1-209ENST00000520953 USP54Q70EL1 1684 aa20.22■□□□□ 0.83
SREK1-209ENST00000520953 NHSL1Q5SYE7 1610 aa20.21■□□□□ 0.83
SREK1-209ENST00000520953 AATKQ6ZMQ8 1374 aa20.21■□□□□ 0.83
SREK1-209ENST00000520953 PIP4K2BP78356 416 aa20.21■□□□□ 0.83
SREK1-209ENST00000520953 SHPRHQ149N8 1683 aa20.2■□□□□ 0.82
SREK1-209ENST00000520953 PEAK1Q9H792 1746 aa20.2■□□□□ 0.82
SREK1-209ENST00000520953 COL3A1P02461 1466 aaPredicted RBP20.2■□□□□ 0.82
SREK1-209ENST00000520953 SOS2Q07890 1332 aaPredicted RBP20.2■□□□□ 0.82
SREK1-209ENST00000520953 TNS3Q68CZ2 1445 aa20.19■□□□□ 0.82
SREK1-209ENST00000520953 CABLES1Q8TDN4 633 aa20.19■□□□□ 0.82
SREK1-209ENST00000520953 SPATA31A3Q5VYP0 1347 aa20.19■□□□□ 0.82
SREK1-209ENST00000520953 SBNO1A3KN83 1393 aa20.19■□□□□ 0.82
SREK1-209ENST00000520953 MED1Q15648 1581 aaPredicted RBP20.19■□□□□ 0.82
SREK1-209ENST00000520953 ADAMTS8Q9UP79 889 aa20.18■□□□□ 0.82
SREK1-209ENST00000520953 MAP3K19Q56UN5 1328 aa20.18■□□□□ 0.82
SREK1-209ENST00000520953 SMG6Q86US8 1419 aaKnown RBP20.18■□□□□ 0.82
SREK1-209ENST00000520953 UBAP1LF5GYI3 381 aa20.17■□□□□ 0.82
SREK1-209ENST00000520953 CERKQ8TCT0 537 aa20.17■□□□□ 0.82
SREK1-209ENST00000520953 NFAT5O94916 1531 aa20.17■□□□□ 0.82
SREK1-209ENST00000520953 PNPLA6Q8IY17 1366 aa20.16■□□□□ 0.82
SREK1-209ENST00000520953 USP19O94966 1318 aa20.15■□□□□ 0.82
SREK1-209ENST00000520953 SLIT3O75094 1523 aa20.15■□□□□ 0.82
SREK1-209ENST00000520953 TOM1O60784 492 aa20.14■□□□□ 0.81
SREK1-209ENST00000520953 GCP02774 474 aa20.14■□□□□ 0.81
SREK1-209ENST00000520953 HSP90AB2PQ58FF8 381 aa20.14■□□□□ 0.81
SREK1-209ENST00000520953 CFAP53Q96M91 514 aa20.14■□□□□ 0.81
SREK1-209ENST00000520953 CDK12Q9NYV4 1490 aaPredicted RBP20.14■□□□□ 0.81
SREK1-209ENST00000520953 ZBTB7CA1YPR0 619 aa20.14■□□□□ 0.81
SREK1-209ENST00000520953 WDR43Q15061 677 aaKnown RBP eCLIP20.13■□□□□ 0.816e-7■■□□□ 12.2
SREK1-209ENST00000520953 HNRNPUQ00839 825 aaKnown RBP eCLIP20.12■□□□□ 0.81
SREK1-209ENST00000520953 LTN1O94822 1766 aa20.12■□□□□ 0.81
SREK1-209ENST00000520953 AHDC1Q5TGY3 1603 aaPredicted RBP20.12■□□□□ 0.81
SREK1-209ENST00000520953 CRYBG1Q9Y4K1 1723 aa20.12■□□□□ 0.81
SREK1-209ENST00000520953 CCDC146Q8IYE0 955 aa20.11■□□□□ 0.81
SREK1-209ENST00000520953 PHRF1Q9P1Y6 1649 aaKnown RBP20.11■□□□□ 0.81
SREK1-209ENST00000520953 INSRP06213 1382 aa20.1■□□□□ 0.81
SREK1-209ENST00000520953 U2SURPO15042 1029 aaKnown RBP20.1■□□□□ 0.81
SREK1-209ENST00000520953 DIAPH1O60610 1272 aaKnown RBP20.1■□□□□ 0.81
SREK1-209ENST00000520953 ZC3H6P61129 1189 aaKnown RBP20.1■□□□□ 0.81
SREK1-209ENST00000520953 AMPHP49418 695 aa20.1■□□□□ 0.81
SREK1-209ENST00000520953 ARHGEF10O15013 1369 aa20.09■□□□□ 0.81
SREK1-209ENST00000520953 IL13P35225 146 aa20.08■□□□□ 0.81
SREK1-209ENST00000520953 KCNH5Q8NCM2 988 aa20.08■□□□□ 0.81
SREK1-209ENST00000520953 IQSEC2Q5JU85 1478 aa20.08■□□□□ 0.81
SREK1-209ENST00000520953 BLMP54132 1417 aaPredicted RBP20.08■□□□□ 0.8
SREK1-209ENST00000520953 U2AF1L5P0DN76 240 aaPredicted RBP20.08■□□□□ 0.8
SREK1-209ENST00000520953 HOXC9P31274 260 aa20.08■□□□□ 0.8
SREK1-209ENST00000520953 U2AF1Q01081 240 aaKnown RBP eCLIP20.08■□□□□ 0.84e-10■■■□□ 18
SREK1-209ENST00000520953 EIF4A2Q14240 407 aaKnown RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms