RNA–Protein interactions for RNA: ENST00000520736.1

GINS4-207, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-207ENST00000520736 PMFBP1Q8TBY8 1022 aa18.29■□□□□ 0.52
GINS4-207ENST00000520736 ABCA3Q99758 1704 aa18.29■□□□□ 0.52
GINS4-207ENST00000520736 TERF2IPQ9NYB0 399 aa18.28■□□□□ 0.52
GINS4-207ENST00000520736 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
GINS4-207ENST00000520736 KTN1Q86UP2 1357 aaKnown RBP18.28■□□□□ 0.52
GINS4-207ENST00000520736 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.52
GINS4-207ENST00000520736 FOXO3O43524 673 aa18.26■□□□□ 0.51
GINS4-207ENST00000520736 PIP4K2BP78356 416 aa18.26■□□□□ 0.51
GINS4-207ENST00000520736 TMC1Q8TDI8 760 aa18.26■□□□□ 0.51
GINS4-207ENST00000520736 PHRF1Q9P1Y6 1649 aaKnown RBP18.26■□□□□ 0.51
GINS4-207ENST00000520736 NSD3Q9BZ95 1437 aa18.25■□□□□ 0.51
GINS4-207ENST00000520736 HSPA1LP34931 641 aa18.25■□□□□ 0.51
GINS4-207ENST00000520736 HDGFL2Q7Z4V5 671 aaPredicted RBP18.25■□□□□ 0.51
GINS4-207ENST00000520736 NGDNQ8NEJ9 315 aaKnown RBP18.25■□□□□ 0.51
GINS4-207ENST00000520736 TTC21AQ8NDW8 1320 aa18.23■□□□□ 0.51
GINS4-207ENST00000520736 DDX17Q92841 729 aaKnown RBP18.23■□□□□ 0.51
GINS4-207ENST00000520736 CARD14Q9BXL6 1004 aa18.23■□□□□ 0.51
GINS4-207ENST00000520736 SLIT3O75094 1523 aa18.23■□□□□ 0.51
GINS4-207ENST00000520736 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
GINS4-207ENST00000520736 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
GINS4-207ENST00000520736 PER1O15534 1290 aaPredicted RBP18.22■□□□□ 0.51
GINS4-207ENST00000520736 KRT28Q7Z3Y7 464 aa18.22■□□□□ 0.51
GINS4-207ENST00000520736 SPATA31A3Q5VYP0 1347 aa18.22■□□□□ 0.51
GINS4-207ENST00000520736 TTC21BQ7Z4L5 1316 aa18.22■□□□□ 0.51
GINS4-207ENST00000520736 USP31Q70CQ4 1352 aa18.21■□□□□ 0.51
GINS4-207ENST00000520736 NPC1L1Q9UHC9 1359 aa18.21■□□□□ 0.51
GINS4-207ENST00000520736 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
GINS4-207ENST00000520736 PANK3Q9H999 370 aa18.21■□□□□ 0.51
GINS4-207ENST00000520736 ARHGEF10O15013 1369 aa18.2■□□□□ 0.5
GINS4-207ENST00000520736 PSME1Q06323 249 aa18.2■□□□□ 0.5
GINS4-207ENST00000520736 NSD2O96028 1365 aa18.19■□□□□ 0.5
GINS4-207ENST00000520736 PNPLA6Q8IY17 1366 aa18.19■□□□□ 0.5
GINS4-207ENST00000520736 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
GINS4-207ENST00000520736 NFAT5O94916 1531 aa18.17■□□□□ 0.5
GINS4-207ENST00000520736 USP19O94966 1318 aa18.17■□□□□ 0.5
GINS4-207ENST00000520736 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
GINS4-207ENST00000520736 LRRC59Q96AG4 307 aaKnown RBP18.15■□□□□ 0.5
GINS4-207ENST00000520736 CGNL1Q0VF96 1302 aa18.15■□□□□ 0.5
GINS4-207ENST00000520736 JCADQ9P266 1359 aa18.15■□□□□ 0.5
GINS4-207ENST00000520736 FYB1O15117 783 aa18.13■□□□□ 0.49
GINS4-207ENST00000520736 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
GINS4-207ENST00000520736 DDX10Q13206 875 aaKnown RBP18.12■□□□□ 0.49
GINS4-207ENST00000520736 NME9Q86XW9 330 aa18.12■□□□□ 0.49
GINS4-207ENST00000520736 ABCC6O95255 1503 aa18.12■□□□□ 0.49
GINS4-207ENST00000520736 LTN1O94822 1766 aa18.1■□□□□ 0.49
GINS4-207ENST00000520736 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.1■□□□□ 0.49
GINS4-207ENST00000520736 KNSTRNQ9Y448 316 aa18.1■□□□□ 0.49
GINS4-207ENST00000520736 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
GINS4-207ENST00000520736 PAK3O75914 559 aaPredicted RBP18.09■□□□□ 0.49
GINS4-207ENST00000520736 ABTB2Q8N961 1025 aa18.09■□□□□ 0.49
GINS4-207ENST00000520736 LMO7Q8WWI1 1683 aa18.09■□□□□ 0.49
GINS4-207ENST00000520736 LRP6O75581 1613 aa18.08■□□□□ 0.48
GINS4-207ENST00000520736 COL18A1P39060 1754 aa18.07■□□□□ 0.48
GINS4-207ENST00000520736 PARD3Q8TEW0 1356 aa18.07■□□□□ 0.48
GINS4-207ENST00000520736 SPATA31A6Q5VVP1 1343 aa18.07■□□□□ 0.48
GINS4-207ENST00000520736 NLRP13Q86W25 1043 aa18.07■□□□□ 0.48
GINS4-207ENST00000520736 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
GINS4-207ENST00000520736 CPDO75976 1380 aa18.06■□□□□ 0.48
GINS4-207ENST00000520736 AATKQ6ZMQ8 1374 aa18.06■□□□□ 0.48
GINS4-207ENST00000520736 GGNBP2Q9H3C7 697 aa18.06■□□□□ 0.48
GINS4-207ENST00000520736 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
GINS4-207ENST00000520736 COL14A1Q05707 1796 aaKnown RBP18.05■□□□□ 0.48
GINS4-207ENST00000520736 NLRP6P59044 892 aa18.05■□□□□ 0.48
GINS4-207ENST00000520736 PLCH1Q4KWH8 1693 aa18.05■□□□□ 0.48
GINS4-207ENST00000520736 COG3Q96JB2 828 aa18.04■□□□□ 0.48
GINS4-207ENST00000520736 NWD2Q9ULI1 1742 aa18.03■□□□□ 0.48
GINS4-207ENST00000520736 MAP2P11137 1827 aaKnown RBP18.03■□□□□ 0.48
GINS4-207ENST00000520736 NRAPQ86VF7 1730 aa18.02■□□□□ 0.48
GINS4-207ENST00000520736 KCNH5Q8NCM2 988 aa18.02■□□□□ 0.48
GINS4-207ENST00000520736 KIF24Q5T7B8 1368 aa18.02■□□□□ 0.47
GINS4-207ENST00000520736 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.01■□□□□ 0.47
GINS4-207ENST00000520736 GCP02774 474 aa18.01■□□□□ 0.47
GINS4-207ENST00000520736 NUTM2GQ5VZR2 741 aa18.01■□□□□ 0.47
GINS4-207ENST00000520736 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
GINS4-207ENST00000520736 RTL1A6NKG5 1358 aa18■□□□□ 0.47
GINS4-207ENST00000520736 CDK12Q9NYV4 1490 aaPredicted RBP18■□□□□ 0.47
GINS4-207ENST00000520736 CC2D1BQ5T0F9 858 aaKnown RBP17.98■□□□□ 0.47
GINS4-207ENST00000520736 CABLES1Q8TDN4 633 aa17.98■□□□□ 0.47
GINS4-207ENST00000520736 FAM208AQ9UK61 1670 aaKnown RBP17.98■□□□□ 0.47
GINS4-207ENST00000520736 CAMTA1Q9Y6Y1 1673 aa17.98■□□□□ 0.47
GINS4-207ENST00000520736 RGPD5Q99666 1765 aa17.97■□□□□ 0.47
GINS4-207ENST00000520736 KIAA0232Q92628 1395 aa17.97■□□□□ 0.47
GINS4-207ENST00000520736 ARHGEF25Q86VW2 580 aa17.97■□□□□ 0.47
GINS4-207ENST00000520736 SLIT2O94813 1529 aa17.97■□□□□ 0.47
GINS4-207ENST00000520736 COL3A1P02461 1466 aaPredicted RBP17.96■□□□□ 0.47
GINS4-207ENST00000520736 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
GINS4-207ENST00000520736 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
GINS4-207ENST00000520736 BLMP54132 1417 aaPredicted RBP17.96■□□□□ 0.47
GINS4-207ENST00000520736 RALBP1Q15311 655 aa17.95■□□□□ 0.46
GINS4-207ENST00000520736 MAP3K19Q56UN5 1328 aa17.95■□□□□ 0.46
GINS4-207ENST00000520736 INSRP06213 1382 aa17.94■□□□□ 0.46
GINS4-207ENST00000520736 RGPD1P0DJD0 1748 aa17.94■□□□□ 0.46
GINS4-207ENST00000520736 FLT4P35916 1363 aa17.93■□□□□ 0.46
GINS4-207ENST00000520736 COL5A2P05997 1499 aaPredicted RBP17.93■□□□□ 0.46
GINS4-207ENST00000520736 POLKQ9UBT6 870 aa17.92■□□□□ 0.46
GINS4-207ENST00000520736 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
GINS4-207ENST00000520736 MYBBP1AQ9BQG0 1328 aaKnown RBP17.91■□□□□ 0.46
GINS4-207ENST00000520736 FBLN1P23142 703 aa17.9■□□□□ 0.46
GINS4-207ENST00000520736 WNK3Q9BYP7 1800 aa17.89■□□□□ 0.45
GINS4-207ENST00000520736 ZC3H6P61129 1189 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms