RNA–Protein interactions for RNA: ENST00000518977.5

TNIP1-205, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-205ENST00000518977 PLEKHF1Q96S99 279 aa27.05■■□□□ 1.92
TNIP1-205ENST00000518977 CCDC61Q9Y6R9 512 aa27.05■■□□□ 1.92
TNIP1-205ENST00000518977 WDR63Q8IWG1 891 aa27.05■■□□□ 1.92
TNIP1-205ENST00000518977 FER1L4A9Z1Z3 1794 aa27.04■■□□□ 1.92
TNIP1-205ENST00000518977 PNPLA6Q8IY17 1366 aa27.04■■□□□ 1.92
TNIP1-205ENST00000518977 DIAPH1O60610 1272 aaKnown RBP27.03■■□□□ 1.92
TNIP1-205ENST00000518977 PRR36Q9H6K5 1346 aa27.02■■□□□ 1.92
TNIP1-205ENST00000518977 NME9Q86XW9 330 aa27.02■■□□□ 1.92
TNIP1-205ENST00000518977 POLKQ9UBT6 870 aa27.02■■□□□ 1.92
TNIP1-205ENST00000518977 ZRANB1Q9UGI0 708 aa27.02■■□□□ 1.92
TNIP1-205ENST00000518977 EID1Q9Y6B2 187 aa27.02■■□□□ 1.92
TNIP1-205ENST00000518977 PPM1GO15355 546 aaPredicted RBP27.02■■□□□ 1.92
TNIP1-205ENST00000518977 EDC4Q6P2E9 1401 aaKnown RBP27.01■■□□□ 1.92
TNIP1-205ENST00000518977 ADGRB2O60241 1585 aa27.01■■□□□ 1.91
TNIP1-205ENST00000518977 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.99■■□□□ 1.91
TNIP1-205ENST00000518977 PTPRUQ92729 1446 aa26.99■■□□□ 1.91
TNIP1-205ENST00000518977 NCBP3Q53F19 620 aaKnown RBP26.98■■□□□ 1.91
TNIP1-205ENST00000518977 CDC42BPGQ6DT37 1551 aa26.98■■□□□ 1.91
TNIP1-205ENST00000518977 MAP2P11137 1827 aaKnown RBP26.98■■□□□ 1.91
TNIP1-205ENST00000518977 NUTM2FA1L443 756 aa26.97■■□□□ 1.91
TNIP1-205ENST00000518977 TMPOP42166 694 aaKnown RBP26.97■■□□□ 1.91
TNIP1-205ENST00000518977 FANCIQ9NVI1 1328 aa26.96■■□□□ 1.91
TNIP1-205ENST00000518977 SLIT1O75093 1534 aa26.96■■□□□ 1.91
TNIP1-205ENST00000518977 ARHGAP23Q9P227 1491 aa26.96■■□□□ 1.91
TNIP1-205ENST00000518977 EMILIN1Q9Y6C2 1016 aa26.95■■□□□ 1.9
TNIP1-205ENST00000518977 MAPK8IP3Q9UPT6 1336 aa26.95■■□□□ 1.9
TNIP1-205ENST00000518977 THEMISQ8N1K5 641 aaPredicted RBP26.94■■□□□ 1.9
TNIP1-205ENST00000518977 TRIM35Q9UPQ4 493 aa26.94■■□□□ 1.9
TNIP1-205ENST00000518977 AMOTL2Q9Y2J4 779 aa26.94■■□□□ 1.9
TNIP1-205ENST00000518977 MON2Q7Z3U7 1717 aa26.94■■□□□ 1.9
TNIP1-205ENST00000518977 RARSP54136 660 aaKnown RBP26.92■■□□□ 1.9
TNIP1-205ENST00000518977 ZNF692Q9BU19 519 aaPredicted RBP26.92■■□□□ 1.9
TNIP1-205ENST00000518977 AKAP12Q02952 1782 aa26.92■■□□□ 1.9
TNIP1-205ENST00000518977 SKAP1Q86WV1 359 aa26.91■■□□□ 1.9
TNIP1-205ENST00000518977 COG3Q96JB2 828 aa26.91■■□□□ 1.9
TNIP1-205ENST00000518977 MYH16Q9H6N6 1097 aa26.91■■□□□ 1.9
TNIP1-205ENST00000518977 TBX22Q9Y458 520 aa26.91■■□□□ 1.9
TNIP1-205ENST00000518977 ITSN1Q15811 1721 aa26.9■■□□□ 1.9
TNIP1-205ENST00000518977 MSH5O43196 834 aa26.9■■□□□ 1.9
TNIP1-205ENST00000518977 RIPK4P57078 832 aa26.89■■□□□ 1.9
TNIP1-205ENST00000518977 KDM2BQ8NHM5 1336 aa26.89■■□□□ 1.9
TNIP1-205ENST00000518977 FCHSD2O94868 740 aa26.89■■□□□ 1.89
TNIP1-205ENST00000518977 FRAT1Q92837 279 aaPredicted RBP26.88■■□□□ 1.89
TNIP1-205ENST00000518977 TSR2Q969E8 191 aaKnown RBP26.88■■□□□ 1.89
TNIP1-205ENST00000518977 ACEP12821 1306 aa26.88■■□□□ 1.89
TNIP1-205ENST00000518977 RRS1Q15050 365 aaKnown RBP26.88■■□□□ 1.89
TNIP1-205ENST00000518977 TCERG1O14776 1098 aaKnown RBP26.87■■□□□ 1.89
TNIP1-205ENST00000518977 CANXP27824 592 aaKnown RBP26.87■■□□□ 1.89
TNIP1-205ENST00000518977 RSPH6AQ9H0K4 717 aa26.87■■□□□ 1.89
TNIP1-205ENST00000518977 BCL2L13Q9BXK5 485 aa26.86■■□□□ 1.89
TNIP1-205ENST00000518977 PNNQ9H307 717 aaKnown RBP26.86■■□□□ 1.89
TNIP1-205ENST00000518977 PRKAR2BP31323 418 aa26.86■■□□□ 1.89
TNIP1-205ENST00000518977 PDE3AQ14432 1141 aa26.86■■□□□ 1.89
TNIP1-205ENST00000518977 PANK1Q8TE04 598 aa26.86■■□□□ 1.89
TNIP1-205ENST00000518977 AATKQ6ZMQ8 1374 aa26.85■■□□□ 1.89
TNIP1-205ENST00000518977 HMOX1P09601 288 aa26.85■■□□□ 1.89
TNIP1-205ENST00000518977 LRRC7Q96NW7 1537 aa26.85■■□□□ 1.89
TNIP1-205ENST00000518977 PLEKHG3A1L390 1219 aa26.84■■□□□ 1.89
TNIP1-205ENST00000518977 IL13P35225 146 aa26.84■■□□□ 1.89
TNIP1-205ENST00000518977 TTC21BQ7Z4L5 1316 aa26.83■■□□□ 1.89
TNIP1-205ENST00000518977 TOPAZ1Q8N9V7 1692 aa26.83■■□□□ 1.89
TNIP1-205ENST00000518977 COG6Q9Y2V7 657 aa26.82■■□□□ 1.88
TNIP1-205ENST00000518977 CENPQQ7L2Z9 268 aaPredicted RBP26.82■■□□□ 1.88
TNIP1-205ENST00000518977 PHACTR3Q96KR7 559 aa26.82■■□□□ 1.88
TNIP1-205ENST00000518977 TNNQ9UQP3 1299 aa26.81■■□□□ 1.88
TNIP1-205ENST00000518977 CDK12Q9NYV4 1490 aaPredicted RBP26.8■■□□□ 1.88
TNIP1-205ENST00000518977 EXOSC9Q06265 439 aaKnown RBP26.8■■□□□ 1.88
TNIP1-205ENST00000518977 PTCH1Q13635 1447 aa26.78■■□□□ 1.88
TNIP1-205ENST00000518977 PMFBP1Q8TBY8 1022 aa26.78■■□□□ 1.88
TNIP1-205ENST00000518977 NRKQ7Z2Y5 1582 aa26.78■■□□□ 1.88
TNIP1-205ENST00000518977 IL16Q14005 1332 aa26.77■■□□□ 1.88
TNIP1-205ENST00000518977 USP6P35125 1406 aa26.77■■□□□ 1.88
TNIP1-205ENST00000518977 MS4A1P11836 297 aa26.77■■□□□ 1.88
TNIP1-205ENST00000518977 RLBP1P12271 317 aa26.77■■□□□ 1.88
TNIP1-205ENST00000518977 RIMS1Q86UR5 1692 aaKnown RBP26.76■■□□□ 1.87
TNIP1-205ENST00000518977 CEP170BQ9Y4F5 1589 aaPredicted RBP26.76■■□□□ 1.87
TNIP1-205ENST00000518977 NEFMP07197 916 aa26.75■■□□□ 1.87
TNIP1-205ENST00000518977 PDE4AP27815 886 aa26.75■■□□□ 1.87
TNIP1-205ENST00000518977 DIP2AQ14689 1571 aa26.75■■□□□ 1.87
TNIP1-205ENST00000518977 KCNA6P17658 529 aa26.74■■□□□ 1.87
TNIP1-205ENST00000518977 CLUAP1Q96AJ1 413 aa26.73■■□□□ 1.87
TNIP1-205ENST00000518977 RGPD8O14715 1765 aaPredicted RBP26.73■■□□□ 1.87
TNIP1-205ENST00000518977 NFE2L2Q16236 605 aa26.73■■□□□ 1.87
TNIP1-205ENST00000518977 IGHDP01880 384 aa26.72■■□□□ 1.87
TNIP1-205ENST00000518977 CT47B1P0C2W7 299 aaPredicted RBP26.72■■□□□ 1.87
TNIP1-205ENST00000518977 OVOS2A0A0J9YW53 1432 aa26.72■■□□□ 1.87
TNIP1-205ENST00000518977 OVOS2Q6IE36 1432 aa26.72■■□□□ 1.87
TNIP1-205ENST00000518977 XRN1Q8IZH2 1706 aaKnown RBP26.71■■□□□ 1.87
TNIP1-205ENST00000518977 BACH2Q9BYV9 841 aa26.71■■□□□ 1.87
TNIP1-205ENST00000518977 SSH2Q76I76 1423 aa26.71■■□□□ 1.87
TNIP1-205ENST00000518977 THUMPD2Q9BTF0 503 aaKnown RBP26.7■■□□□ 1.86
TNIP1-205ENST00000518977 SOX12O15370 315 aa26.69■■□□□ 1.86
TNIP1-205ENST00000518977 SSH1Q8WYL5 1049 aa26.69■■□□□ 1.86
TNIP1-205ENST00000518977 ANP32EQ9BTT0 268 aa26.69■■□□□ 1.86
TNIP1-205ENST00000518977 SMC4Q9NTJ3 1288 aa26.69■■□□□ 1.86
TNIP1-205ENST00000518977 LAS1LQ9Y4W2 734 aaKnown RBP26.69■■□□□ 1.86
TNIP1-205ENST00000518977 NGDNQ8NEJ9 315 aaKnown RBP26.68■■□□□ 1.86
TNIP1-205ENST00000518977 EIF4A2Q14240 407 aaKnown RBP26.67■■□□□ 1.86
TNIP1-205ENST00000518977 ZKSCAN2Q63HK3 967 aa26.66■■□□□ 1.86
TNIP1-205ENST00000518977 HSP90AB2PQ58FF8 381 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms