RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 SRPK2P78362 688 aaKnown RBP21.04■□□□□ 0.96
PCDHGA11-202ENST00000518882 IDI1Q13907 227 aa21.03■□□□□ 0.96
PCDHGA11-202ENST00000518882 ITPRIPQ8IWB1 547 aa21.03■□□□□ 0.96
PCDHGA11-202ENST00000518882 CD163L1Q9NR16 1453 aa21.03■□□□□ 0.96
PCDHGA11-202ENST00000518882 RAPGEF3O95398 923 aa21.02■□□□□ 0.96
PCDHGA11-202ENST00000518882 ATF7IPQ6VMQ6 1270 aa21.02■□□□□ 0.96
PCDHGA11-202ENST00000518882 FYB1O15117 783 aa21.02■□□□□ 0.95
PCDHGA11-202ENST00000518882 HDAC1Q13547 482 aaPredicted RBP21.02■□□□□ 0.95
PCDHGA11-202ENST00000518882 NOB1Q9ULX3 412 aaKnown RBP21.02■□□□□ 0.95
PCDHGA11-202ENST00000518882 PTPRMP28827 1452 aa21.02■□□□□ 0.95
PCDHGA11-202ENST00000518882 DIP2CQ9Y2E4 1556 aa21.01■□□□□ 0.95
PCDHGA11-202ENST00000518882 SPRYD3Q8NCJ5 442 aa21.01■□□□□ 0.95
PCDHGA11-202ENST00000518882 NPM1P06748 294 aaKnown RBP eCLIP21■□□□□ 0.95
PCDHGA11-202ENST00000518882 DDX19BQ9UMR2 479 aa21■□□□□ 0.95
PCDHGA11-202ENST00000518882 MINK1Q8N4C8 1332 aaPredicted RBP20.99■□□□□ 0.95
PCDHGA11-202ENST00000518882 CLTCQ00610 1675 aaKnown RBP20.99■□□□□ 0.95
PCDHGA11-202ENST00000518882 MFAP1P55081 439 aaKnown RBP20.99■□□□□ 0.95
PCDHGA11-202ENST00000518882 TMEM57Q8N5G2 664 aa20.99■□□□□ 0.95
PCDHGA11-202ENST00000518882 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.99■□□□□ 0.95
PCDHGA11-202ENST00000518882 RIPK4P57078 832 aa20.98■□□□□ 0.95
PCDHGA11-202ENST00000518882 C22orf23Q9BZE7 217 aa20.98■□□□□ 0.95
PCDHGA11-202ENST00000518882 ZFYVE9O95405 1425 aa20.98■□□□□ 0.95
PCDHGA11-202ENST00000518882 IL16Q14005 1332 aa20.98■□□□□ 0.95
PCDHGA11-202ENST00000518882 SMC5Q8IY18 1101 aa20.97■□□□□ 0.95
PCDHGA11-202ENST00000518882 MED14O60244 1454 aa20.97■□□□□ 0.95
PCDHGA11-202ENST00000518882 ARHGAP31Q2M1Z3 1444 aa20.97■□□□□ 0.95
PCDHGA11-202ENST00000518882 ZBTB40Q9NUA8 1239 aa20.96■□□□□ 0.95
PCDHGA11-202ENST00000518882 KIF20BQ96Q89 1820 aa20.96■□□□□ 0.95
PCDHGA11-202ENST00000518882 PRAM1Q96QH2 718 aa20.95■□□□□ 0.95
PCDHGA11-202ENST00000518882 ATAD2Q6PL18 1390 aa20.95■□□□□ 0.94
PCDHGA11-202ENST00000518882 TMEM131LA2VDJ0 1609 aa20.95■□□□□ 0.94
PCDHGA11-202ENST00000518882 TERF2IPQ9NYB0 399 aa20.94■□□□□ 0.94
PCDHGA11-202ENST00000518882 DIAPH1O60610 1272 aaKnown RBP20.94■□□□□ 0.94
PCDHGA11-202ENST00000518882 PNPLA6Q8IY17 1366 aa20.94■□□□□ 0.94
PCDHGA11-202ENST00000518882 PREX1Q8TCU6 1659 aa20.94■□□□□ 0.94
PCDHGA11-202ENST00000518882 LRRC7Q96NW7 1537 aa20.93■□□□□ 0.94
PCDHGA11-202ENST00000518882 YTHDC2Q9H6S0 1430 aaKnown RBP20.92■□□□□ 0.94
PCDHGA11-202ENST00000518882 RICTORQ6R327 1708 aa20.91■□□□□ 0.94
PCDHGA11-202ENST00000518882 KIF16BQ96L93 1317 aa20.91■□□□□ 0.94
PCDHGA11-202ENST00000518882 SLC52A1Q9NWF4 448 aa20.91■□□□□ 0.94
PCDHGA11-202ENST00000518882 MCM4P33991 863 aa20.9■□□□□ 0.94
PCDHGA11-202ENST00000518882 NEO1Q92859 1461 aa20.9■□□□□ 0.94
PCDHGA11-202ENST00000518882 FBLN1P23142 703 aa20.9■□□□□ 0.94
PCDHGA11-202ENST00000518882 FAM43AQ8N2R8 423 aa20.9■□□□□ 0.94
PCDHGA11-202ENST00000518882 CDC42BPGQ6DT37 1551 aa20.89■□□□□ 0.94
PCDHGA11-202ENST00000518882 NUCB1Q02818 461 aa20.89■□□□□ 0.93
PCDHGA11-202ENST00000518882 YEATS2Q9ULM3 1422 aa20.88■□□□□ 0.93
PCDHGA11-202ENST00000518882 IPO8O15397 1037 aaKnown RBP20.88■□□□□ 0.93
PCDHGA11-202ENST00000518882 CDK19Q9BWU1 502 aa20.88■□□□□ 0.93
PCDHGA11-202ENST00000518882 LNPKQ9C0E8 428 aa20.88■□□□□ 0.93
PCDHGA11-202ENST00000518882 CABP1Q9NZU7 370 aa20.88■□□□□ 0.93
PCDHGA11-202ENST00000518882 ARHGEF40Q8TER5 1519 aa20.87■□□□□ 0.93
PCDHGA11-202ENST00000518882 ALDH1L2Q3SY69 923 aa20.87■□□□□ 0.93
PCDHGA11-202ENST00000518882 MAP2P11137 1827 aaKnown RBP20.87■□□□□ 0.93
PCDHGA11-202ENST00000518882 FAM135BQ49AJ0 1406 aa20.87■□□□□ 0.93
PCDHGA11-202ENST00000518882 HDGFL2Q7Z4V5 671 aaPredicted RBP20.87■□□□□ 0.93
PCDHGA11-202ENST00000518882 RSPH6AQ9H0K4 717 aa20.87■□□□□ 0.93
PCDHGA11-202ENST00000518882 CHMP5Q9NZZ3 219 aa20.87■□□□□ 0.93
PCDHGA11-202ENST00000518882 ALKQ9UM73 1620 aa20.87■□□□□ 0.93
PCDHGA11-202ENST00000518882 PRKAR2BP31323 418 aa20.86■□□□□ 0.93
PCDHGA11-202ENST00000518882 FCHSD2O94868 740 aa20.85■□□□□ 0.93
PCDHGA11-202ENST00000518882 L1TD1Q5T7N2 865 aaKnown RBP20.85■□□□□ 0.93
PCDHGA11-202ENST00000518882 ARXQ96QS3 562 aa20.85■□□□□ 0.93
PCDHGA11-202ENST00000518882 ZNF692Q9BU19 519 aaPredicted RBP20.85■□□□□ 0.93
PCDHGA11-202ENST00000518882 PNNQ9H307 717 aaKnown RBP20.85■□□□□ 0.93
PCDHGA11-202ENST00000518882 CHD1LQ86WJ1 897 aa20.84■□□□□ 0.93
PCDHGA11-202ENST00000518882 GZF1Q9H116 711 aaPredicted RBP20.84■□□□□ 0.93
PCDHGA11-202ENST00000518882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.83■□□□□ 0.93
PCDHGA11-202ENST00000518882 PHACTR3Q96KR7 559 aa20.83■□□□□ 0.93
PCDHGA11-202ENST00000518882 THUMPD2Q9BTF0 503 aaKnown RBP20.83■□□□□ 0.93
PCDHGA11-202ENST00000518882 POLKQ9UBT6 870 aa20.83■□□□□ 0.93
PCDHGA11-202ENST00000518882 NCOA3Q9Y6Q9 1424 aa20.83■□□□□ 0.93
PCDHGA11-202ENST00000518882 RBM25P49756 843 aaKnown RBP20.83■□□□□ 0.92
PCDHGA11-202ENST00000518882 FBXO31Q5XUX0 539 aaPredicted RBP20.83■□□□□ 0.92
PCDHGA11-202ENST00000518882 HSCBQ8IWL3 235 aa20.83■□□□□ 0.92
PCDHGA11-202ENST00000518882 PPIP5K1Q6PFW1 1433 aa20.82■□□□□ 0.92
PCDHGA11-202ENST00000518882 FSD2A1L4K1 749 aa20.81■□□□□ 0.92
PCDHGA11-202ENST00000518882 HMOX1P09601 288 aa20.81■□□□□ 0.92
PCDHGA11-202ENST00000518882 XRCC6P12956 609 aaKnown RBP eCLIP20.81■□□□□ 0.92
PCDHGA11-202ENST00000518882 BRPF1P55201 1214 aaPredicted RBP20.81■□□□□ 0.92
PCDHGA11-202ENST00000518882 ZBTB7BO15156 539 aaPredicted RBP20.8■□□□□ 0.92
PCDHGA11-202ENST00000518882 DDIT3P35638 169 aa20.8■□□□□ 0.92
PCDHGA11-202ENST00000518882 TSPYL6Q8N831 410 aa20.8■□□□□ 0.92
PCDHGA11-202ENST00000518882 C1orf115Q9H7X2 142 aa20.8■□□□□ 0.92
PCDHGA11-202ENST00000518882 TRAK2O60296 914 aa20.8■□□□□ 0.92
PCDHGA11-202ENST00000518882 VAMP4O75379 141 aa20.8■□□□□ 0.92
PCDHGA11-202ENST00000518882 RRAGDQ9NQL2 400 aaPredicted RBP20.79■□□□□ 0.92
PCDHGA11-202ENST00000518882 DLG5Q8TDM6 1919 aa20.79■□□□□ 0.92
PCDHGA11-202ENST00000518882 GOLGA6L3A6NEY3 463 aa20.79■□□□□ 0.92
PCDHGA11-202ENST00000518882 MRPL50Q8N5N7 158 aaKnown RBP20.79■□□□□ 0.92
PCDHGA11-202ENST00000518882 NFE2L2Q16236 605 aa20.78■□□□□ 0.92
PCDHGA11-202ENST00000518882 BMP2KLQ5H9B9 411 aa20.78■□□□□ 0.92
PCDHGA11-202ENST00000518882 PTCH1Q13635 1447 aa20.77■□□□□ 0.92
PCDHGA11-202ENST00000518882 ANKRD45Q5TZF3 282 aa20.77■□□□□ 0.92
PCDHGA11-202ENST00000518882 WAPLQ7Z5K2 1190 aa20.77■□□□□ 0.92
PCDHGA11-202ENST00000518882 ZNF428Q96B54 188 aa20.77■□□□□ 0.92
PCDHGA11-202ENST00000518882 PANK2Q9BZ23 570 aa20.77■□□□□ 0.92
PCDHGA11-202ENST00000518882 PIK3R4Q99570 1358 aa20.77■□□□□ 0.91
PCDHGA11-202ENST00000518882 SNX21Q969T3 373 aa20.76■□□□□ 0.91
PCDHGA11-202ENST00000518882 KIF2CQ99661 725 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms