RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 MVPQ14764 893 aaKnown RBP10.86□□□□□ -0.67
CTNNA1-210ENST00000518825 FRAT2O75474 233 aaPredicted RBP10.85□□□□□ -0.67
CTNNA1-210ENST00000518825 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
CTNNA1-210ENST00000518825 PNPLA6Q8IY17 1366 aa10.85□□□□□ -0.67
CTNNA1-210ENST00000518825 ALKQ9UM73 1620 aa10.85□□□□□ -0.67
CTNNA1-210ENST00000518825 MED14O60244 1454 aa10.85□□□□□ -0.67
CTNNA1-210ENST00000518825 U2SURPO15042 1029 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-210ENST00000518825 PMFBP1Q8TBY8 1022 aa10.85□□□□□ -0.67
CTNNA1-210ENST00000518825 TRIM27P14373 513 aa10.84□□□□□ -0.67
CTNNA1-210ENST00000518825 SSH1Q8WYL5 1049 aa10.84□□□□□ -0.67
CTNNA1-210ENST00000518825 AAMPQ13685 434 aa10.83□□□□□ -0.68
CTNNA1-210ENST00000518825 CDK19Q9BWU1 502 aa10.83□□□□□ -0.68
CTNNA1-210ENST00000518825 ATAD2Q6PL18 1390 aa10.83□□□□□ -0.68
CTNNA1-210ENST00000518825 GSE1Q14687 1217 aa10.83□□□□□ -0.68
CTNNA1-210ENST00000518825 ZKSCAN2Q63HK3 967 aa10.83□□□□□ -0.68
CTNNA1-210ENST00000518825 DZIP1LQ8IYY4 767 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-210ENST00000518825 CABP1Q9NZU7 370 aa10.83□□□□□ -0.68
CTNNA1-210ENST00000518825 ZMYM3Q14202 1370 aa10.81□□□□□ -0.68
CTNNA1-210ENST00000518825 SETD1AO15047 1707 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-210ENST00000518825 DAXXQ9UER7 740 aaPredicted RBP10.81□□□□□ -0.68
CTNNA1-210ENST00000518825 NOB1Q9ULX3 412 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-210ENST00000518825 LRRC7Q96NW7 1537 aa10.81□□□□□ -0.68
CTNNA1-210ENST00000518825 KIF20BQ96Q89 1820 aa10.81□□□□□ -0.68
CTNNA1-210ENST00000518825 RIPK4P57078 832 aa10.81□□□□□ -0.68
CTNNA1-210ENST00000518825 WAPLQ7Z5K2 1190 aa10.81□□□□□ -0.68
CTNNA1-210ENST00000518825 TBC1D32Q96NH3 1257 aa10.81□□□□□ -0.68
CTNNA1-210ENST00000518825 ANTXR1Q9H6X2 564 aa10.81□□□□□ -0.68
CTNNA1-210ENST00000518825 SMC4Q9NTJ3 1288 aa10.81□□□□□ -0.68
CTNNA1-210ENST00000518825 CT47B1P0C2W7 299 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-210ENST00000518825 RWDD1Q9H446 243 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-210ENST00000518825 TERF2IPQ9NYB0 399 aa10.8□□□□□ -0.68
CTNNA1-210ENST00000518825 CDC42BPGQ6DT37 1551 aa10.8□□□□□ -0.68
CTNNA1-210ENST00000518825 POGKQ9P215 609 aa10.8□□□□□ -0.68
CTNNA1-210ENST00000518825 ATF7IPQ6VMQ6 1270 aa10.8□□□□□ -0.68
CTNNA1-210ENST00000518825 POLKQ9UBT6 870 aa10.8□□□□□ -0.68
CTNNA1-210ENST00000518825 DIAPH1O60610 1272 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-210ENST00000518825 IL16Q14005 1332 aa10.79□□□□□ -0.68
CTNNA1-210ENST00000518825 RIMBP3CA6NJZ7 1639 aa10.79□□□□□ -0.68
CTNNA1-210ENST00000518825 RIMBP3BA6NNM3 1639 aa10.79□□□□□ -0.68
CTNNA1-210ENST00000518825 RIMBP3Q9UFD9 1639 aa10.79□□□□□ -0.68
CTNNA1-210ENST00000518825 TMEM57Q8N5G2 664 aa10.79□□□□□ -0.68
CTNNA1-210ENST00000518825 RSPH6AQ9H0K4 717 aa10.79□□□□□ -0.68
CTNNA1-210ENST00000518825 HDAC1Q13547 482 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1-210ENST00000518825 FTSJ3Q8IY81 847 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-210ENST00000518825 PHACTR3Q96KR7 559 aa10.79□□□□□ -0.68
CTNNA1-210ENST00000518825 ZBTB40Q9NUA8 1239 aa10.79□□□□□ -0.68
CTNNA1-210ENST00000518825 BRPF3Q9ULD4 1205 aa10.78□□□□□ -0.68
CTNNA1-210ENST00000518825 A2ML1A8K2U0 1454 aa10.78□□□□□ -0.68
CTNNA1-210ENST00000518825 FAM135BQ49AJ0 1406 aa10.78□□□□□ -0.68
CTNNA1-210ENST00000518825 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.78□□□□□ -0.686e-7■■■□□ 16.3
CTNNA1-210ENST00000518825 TBC1D2Q9BYX2 928 aa10.78□□□□□ -0.68
CTNNA1-210ENST00000518825 ITPRIPQ8IWB1 547 aa10.77□□□□□ -0.69
CTNNA1-210ENST00000518825 MAP2P11137 1827 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-210ENST00000518825 NRXN3Q9Y4C0 1643 aa10.77□□□□□ -0.69
CTNNA1-210ENST00000518825 SMC5Q8IY18 1101 aa10.76□□□□□ -0.69
CTNNA1-210ENST00000518825 THUMPD2Q9BTF0 503 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-210ENST00000518825 SLKQ9H2G2 1235 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-210ENST00000518825 ZRANB1Q9UGI0 708 aa10.76□□□□□ -0.69
CTNNA1-210ENST00000518825 FCHSD2O94868 740 aa10.76□□□□□ -0.69
CTNNA1-210ENST00000518825 PRKAR2BP31323 418 aa10.76□□□□□ -0.69
CTNNA1-210ENST00000518825 HDGFL2Q7Z4V5 671 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-210ENST00000518825 NCKAP5LQ9HCH0 1330 aa10.76□□□□□ -0.69
CTNNA1-210ENST00000518825 DDX19BQ9UMR2 479 aa10.76□□□□□ -0.69
CTNNA1-210ENST00000518825 DLC1Q96QB1 1528 aa10.76□□□□□ -0.69
CTNNA1-210ENST00000518825 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-210ENST00000518825 EMILIN1Q9Y6C2 1016 aa10.75□□□□□ -0.69
CTNNA1-210ENST00000518825 CPSF1Q10570 1443 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-210ENST00000518825 HMOX1P09601 288 aa10.75□□□□□ -0.69
CTNNA1-210ENST00000518825 TSPYL6Q8N831 410 aa10.75□□□□□ -0.69
CTNNA1-210ENST00000518825 ATP7BP35670 1465 aa10.75□□□□□ -0.69
CTNNA1-210ENST00000518825 SPATA31D1Q6ZQQ2 1576 aa10.75□□□□□ -0.69
CTNNA1-210ENST00000518825 CYB5RLQ6IPT4 315 aa10.74□□□□□ -0.69
CTNNA1-210ENST00000518825 PPIP5K1Q6PFW1 1433 aa10.74□□□□□ -0.69
CTNNA1-210ENST00000518825 METP08581 1390 aa10.74□□□□□ -0.69
CTNNA1-210ENST00000518825 IL13P35225 146 aa10.74□□□□□ -0.69
CTNNA1-210ENST00000518825 CPS1P31327 1500 aa10.73□□□□□ -0.69
CTNNA1-210ENST00000518825 VAMP4O75379 141 aa10.73□□□□□ -0.69
CTNNA1-210ENST00000518825 NME9Q86XW9 330 aa10.73□□□□□ -0.69
CTNNA1-210ENST00000518825 RIMS2Q9UQ26 1411 aa10.73□□□□□ -0.69
CTNNA1-210ENST00000518825 DIP2BQ9P265 1576 aa10.73□□□□□ -0.69
CTNNA1-210ENST00000518825 ALDH1L2Q3SY69 923 aa10.73□□□□□ -0.69
CTNNA1-210ENST00000518825 REREQ9P2R6 1566 aa10.73□□□□□ -0.69
CTNNA1-210ENST00000518825 BRPF1P55201 1214 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-210ENST00000518825 NUCB1Q02818 461 aa10.72□□□□□ -0.69
CTNNA1-210ENST00000518825 FAM69CQ0P6D2 419 aa10.72□□□□□ -0.69
CTNNA1-210ENST00000518825 AGLP35573 1532 aa10.72□□□□□ -0.69
CTNNA1-210ENST00000518825 TSPOAP1O95153 1857 aa10.72□□□□□ -0.69
CTNNA1-210ENST00000518825 ZBTB7BO15156 539 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-210ENST00000518825 ZNF853P0CG23 659 aa10.72□□□□□ -0.69
CTNNA1-210ENST00000518825 BECN1Q14457 450 aa10.72□□□□□ -0.69
CTNNA1-210ENST00000518825 NFE2L2Q16236 605 aa10.71□□□□□ -0.69
CTNNA1-210ENST00000518825 MRPL50Q8N5N7 158 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-210ENST00000518825 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
CTNNA1-210ENST00000518825 KIF16BQ96L93 1317 aa10.71□□□□□ -0.69
CTNNA1-210ENST00000518825 DLG5Q8TDM6 1919 aa10.71□□□□□ -0.69
CTNNA1-210ENST00000518825 MFAP1P55081 439 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-210ENST00000518825 SIRT2Q8IXJ6 389 aa10.71□□□□□ -0.69
CTNNA1-210ENST00000518825 C22orf23Q9BZE7 217 aa10.71□□□□□ -0.69
CTNNA1-210ENST00000518825 WASLO00401 505 aaPredicted RBP10.71□□□□□ -0.7
CTNNA1-210ENST00000518825 SPRYD3Q8NCJ5 442 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 997.6 ms