RNA–Protein interactions for RNA: ENST00000518682.1

SOD1P3-201, Transcript of superoxide dismutase 1 pseudogene 3, humanhuman

BASIC

Gene SOD1P3, Length 454 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P3-201ENST00000518682 SEPT9Q9UHD8 586 aaPredicted RBP7.02□□□□□ -1.29
SOD1P3-201ENST00000518682 GNEQ9Y223 722 aaKnown RBP7.02□□□□□ -1.29
SOD1P3-201ENST00000518682 RSF1Q96T23 1441 aaPredicted RBP7.01□□□□□ -1.29
SOD1P3-201ENST00000518682 IGSF3O75054 1194 aa7.01□□□□□ -1.29
SOD1P3-201ENST00000518682 HDGFP51858 240 aaKnown RBP7.01□□□□□ -1.29
SOD1P3-201ENST00000518682 CFHP08603 1231 aa7□□□□□ -1.29
SOD1P3-201ENST00000518682 ELOAQ14241 798 aaKnown RBP7□□□□□ -1.29
SOD1P3-201ENST00000518682 RABGEF1Q9UJ41 708 aa7□□□□□ -1.29
SOD1P3-201ENST00000518682 DNMBPQ6XZF7 1577 aa6.99□□□□□ -1.29
SOD1P3-201ENST00000518682 PIK3CDO00329 1044 aa6.99□□□□□ -1.29
SOD1P3-201ENST00000518682 HOXB1P14653 301 aaPredicted RBP6.99□□□□□ -1.29
SOD1P3-201ENST00000518682 PSEN2P49810 448 aa6.99□□□□□ -1.29
SOD1P3-201ENST00000518682 NR1H3Q13133 447 aa6.99□□□□□ -1.29
SOD1P3-201ENST00000518682 TMEM164Q5U3C3 297 aa6.99□□□□□ -1.29
SOD1P3-201ENST00000518682 RETREG3Q86VR2 466 aa6.99□□□□□ -1.29
SOD1P3-201ENST00000518682 KCNH8Q96L42 1107 aa6.99□□□□□ -1.29
SOD1P3-201ENST00000518682 ZMIZ1Q9ULJ6 1067 aa6.99□□□□□ -1.29
SOD1P3-201ENST00000518682 CLASP1Q7Z460 1538 aa6.99□□□□□ -1.29
SOD1P3-201ENST00000518682 CCDC88BA6NC98 1476 aa6.98□□□□□ -1.29
SOD1P3-201ENST00000518682 RAD54L2Q9Y4B4 1467 aa6.98□□□□□ -1.29
SOD1P3-201ENST00000518682 FBXO45P0C2W1 286 aa6.98□□□□□ -1.29
SOD1P3-201ENST00000518682 SLC4A3P48751 1232 aa6.98□□□□□ -1.29
SOD1P3-201ENST00000518682 B4GALNT3Q6L9W6 998 aa6.98□□□□□ -1.29
SOD1P3-201ENST00000518682 STK32AQ8WU08 396 aa6.98□□□□□ -1.29
SOD1P3-201ENST00000518682 POLA1P09884 1462 aaPredicted RBP6.98□□□□□ -1.29
SOD1P3-201ENST00000518682 POTEB2H3BUK9 544 aa6.97□□□□□ -1.29
SOD1P3-201ENST00000518682 FAM98CQ17RN3 349 aaKnown RBP6.97□□□□□ -1.29
SOD1P3-201ENST00000518682 DESI1Q6ICB0 168 aa6.97□□□□□ -1.29
SOD1P3-201ENST00000518682 PHLDB3Q6NSJ2 640 aa6.97□□□□□ -1.29
SOD1P3-201ENST00000518682 LYPD8Q6UX82 237 aa6.97□□□□□ -1.29
SOD1P3-201ENST00000518682 SAMD7Q7Z3H4 446 aa6.97□□□□□ -1.29
SOD1P3-201ENST00000518682 TXNDC2Q86VQ3 553 aa6.97□□□□□ -1.29
SOD1P3-201ENST00000518682 SNAPC4Q5SXM2 1469 aa6.97□□□□□ -1.29
SOD1P3-201ENST00000518682 TDRD9Q8NDG6 1382 aaKnown RBP6.96□□□□□ -1.29
SOD1P3-201ENST00000518682 ZBBXA8MT70 800 aa6.96□□□□□ -1.3
SOD1P3-201ENST00000518682 MORN1Q5T089 497 aa6.96□□□□□ -1.3
SOD1P3-201ENST00000518682 NFATC2IPQ8NCF5 419 aa6.96□□□□□ -1.3
SOD1P3-201ENST00000518682 NOVA2Q9UNW9 492 aaKnown RBP6.96□□□□□ -1.3
SOD1P3-201ENST00000518682 SLC27A5Q9Y2P5 690 aa6.96□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L3A6NCW0 530 aa6.95□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L4A6NCW7 530 aa6.95□□□□□ -1.3
SOD1P3-201ENST00000518682 UNCXA6NJT0 531 aa6.95□□□□□ -1.3
SOD1P3-201ENST00000518682 SKIP12755 728 aa6.95□□□□□ -1.3
SOD1P3-201ENST00000518682 PUS10Q3MIT2 529 aaKnown RBP6.95□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L2Q6R6M4 530 aa6.95□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L1Q7RTZ2 530 aa6.95□□□□□ -1.3
SOD1P3-201ENST00000518682 CCER1Q8TC90 406 aaPredicted RBP6.95□□□□□ -1.3
SOD1P3-201ENST00000518682 SLC4A5Q9BY07 1137 aa6.95□□□□□ -1.3
SOD1P3-201ENST00000518682 SLAIN2Q9P270 581 aa6.94□□□□□ -1.3
SOD1P3-201ENST00000518682 FKBPLQ9UIM3 349 aa6.94□□□□□ -1.3
SOD1P3-201ENST00000518682 SYNJ1O43426 1573 aa6.94□□□□□ -1.3
SOD1P3-201ENST00000518682 ERCC6L2Q5T890 1561 aa6.94□□□□□ -1.3
SOD1P3-201ENST00000518682 GAPVD1Q14C86 1478 aa6.93□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L5A8MUK1 530 aa6.93□□□□□ -1.3
SOD1P3-201ENST00000518682 RNF40O75150 1001 aa6.93□□□□□ -1.3
SOD1P3-201ENST00000518682 Q3C1V9 767 aa6.93□□□□□ -1.3
SOD1P3-201ENST00000518682 KMT5BQ4FZB7 885 aa6.93□□□□□ -1.3
SOD1P3-201ENST00000518682 PLEKHM2Q8IWE5 1019 aa6.93□□□□□ -1.3
SOD1P3-201ENST00000518682 DEPDC4Q8N2C3 294 aa6.93□□□□□ -1.3
SOD1P3-201ENST00000518682 FAM174AQ8TBP5 190 aa6.93□□□□□ -1.3
SOD1P3-201ENST00000518682 MYT1LQ9UL68 1186 aa6.93□□□□□ -1.3
SOD1P3-201ENST00000518682 ABCC8Q09428 1581 aa6.92□□□□□ -1.3
SOD1P3-201ENST00000518682 RBM47A0AV96 593 aaKnown RBP6.92□□□□□ -1.3
SOD1P3-201ENST00000518682 ARHGAP33O14559 1287 aa6.92□□□□□ -1.3
SOD1P3-201ENST00000518682 SSFA2P28290 1259 aa6.92□□□□□ -1.3
SOD1P3-201ENST00000518682 ARID4AP29374 1257 aaPredicted RBP6.92□□□□□ -1.3
SOD1P3-201ENST00000518682 CRTC2Q53ET0 693 aaPredicted RBP6.92□□□□□ -1.3
SOD1P3-201ENST00000518682 DMRTA1Q5VZB9 504 aa6.92□□□□□ -1.3
SOD1P3-201ENST00000518682 POTEEQ6S8J3 1075 aa6.92□□□□□ -1.3
SOD1P3-201ENST00000518682 SCUBE2Q9NQ36 999 aa6.92□□□□□ -1.3
SOD1P3-201ENST00000518682 MKRN1Q9UHC7 482 aaKnown RBP6.92□□□□□ -1.3
SOD1P3-201ENST00000518682 FAM196BA6NMK8 535 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L15C9J2P7 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L10C9JJH3 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L13C9JLJ4 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L12C9JPN9 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L11C9JVI0 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L21D6R901 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L18D6R9N7 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L22D6RA61 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L17D6RBQ6 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L19D6RCP7 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L20D6RJB6 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 SNPHO15079 494 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 ACTN4O43707 911 aaKnown RBP6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 FAM69CQ0P6D2 419 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 USP17L24Q0WX57 530 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 RNF19BQ6ZMZ0 732 aa6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 CHMP7Q8WUX9 453 aaPredicted RBP6.91□□□□□ -1.3
SOD1P3-201ENST00000518682 F12P00748 615 aaPredicted RBP6.9□□□□□ -1.3
SOD1P3-201ENST00000518682 RASA1P20936 1047 aa6.9□□□□□ -1.3
SOD1P3-201ENST00000518682 PTK7Q13308 1070 aa6.9□□□□□ -1.3
SOD1P3-201ENST00000518682 LARP1Q6PKG0 1096 aaKnown RBP6.9□□□□□ -1.3
SOD1P3-201ENST00000518682 BLOC1S3Q6QNY0 202 aa6.9□□□□□ -1.3
SOD1P3-201ENST00000518682 LAPTM4BQ86VI4 370 aa6.9□□□□□ -1.3
SOD1P3-201ENST00000518682 USB1Q9BQ65 265 aaKnown RBP6.9□□□□□ -1.3
SOD1P3-201ENST00000518682 CEP126Q9P2H0 1117 aa6.9□□□□□ -1.3
SOD1P3-201ENST00000518682 VPS9D1Q9Y2B5 631 aa6.9□□□□□ -1.3
SOD1P3-201ENST00000518682 AXIN2Q9Y2T1 843 aa6.9□□□□□ -1.3
SOD1P3-201ENST00000518682 SOGA1O94964 1423 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms