RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 ITSN1Q15811 1721 aa31.03■■■□□ 2.56
SLIT3-204ENST00000518140 RGPD8O14715 1765 aaPredicted RBP31.03■■■□□ 2.56
SLIT3-204ENST00000518140 TTC21BQ7Z4L5 1316 aa31.03■■■□□ 2.56
SLIT3-204ENST00000518140 CDCA7LQ96GN5 454 aa31.02■■■□□ 2.56
SLIT3-204ENST00000518140 APAF1O14727 1248 aa31.01■■■□□ 2.55
SLIT3-204ENST00000518140 POLKQ9UBT6 870 aa31.01■■■□□ 2.55
SLIT3-204ENST00000518140 USP6P35125 1406 aa31■■■□□ 2.55
SLIT3-204ENST00000518140 NALCNQ8IZF0 1738 aa30.99■■■□□ 2.55
SLIT3-204ENST00000518140 NGDNQ8NEJ9 315 aaKnown RBP30.99■■■□□ 2.55
SLIT3-204ENST00000518140 COG3Q96JB2 828 aa30.98■■■□□ 2.55
SLIT3-204ENST00000518140 ANKARQ7Z5J8 1434 aa30.96■■■□□ 2.55
SLIT3-204ENST00000518140 SSH2Q76I76 1423 aa30.96■■■□□ 2.55
SLIT3-204ENST00000518140 PPM1GO15355 546 aaPredicted RBP30.96■■■□□ 2.55
SLIT3-204ENST00000518140 FMN2Q9NZ56 1722 aa30.96■■■□□ 2.55
SLIT3-204ENST00000518140 COL3A1P02461 1466 aaPredicted RBP30.95■■■□□ 2.55
SLIT3-204ENST00000518140 PDE3BQ13370 1112 aa30.94■■■□□ 2.54
SLIT3-204ENST00000518140 EMILIN1Q9Y6C2 1016 aa30.94■■■□□ 2.54
SLIT3-204ENST00000518140 ADGRL3Q9HAR2 1447 aa30.94■■■□□ 2.54
SLIT3-204ENST00000518140 NRKQ7Z2Y5 1582 aa30.93■■■□□ 2.54
SLIT3-204ENST00000518140 PNPLA6Q8IY17 1366 aa30.93■■■□□ 2.54
SLIT3-204ENST00000518140 U2AF1L5P0DN76 240 aaPredicted RBP30.93■■■□□ 2.54
SLIT3-204ENST00000518140 U2AF1Q01081 240 aaKnown RBP eCLIP30.93■■■□□ 2.54
SLIT3-204ENST00000518140 C14orf37Q86TY3 774 aa30.93■■■□□ 2.54
SLIT3-204ENST00000518140 PROSER2Q86WR7 435 aaPredicted RBP30.93■■■□□ 2.54
SLIT3-204ENST00000518140 NEFLP07196 543 aa30.93■■■□□ 2.54
SLIT3-204ENST00000518140 IRX6P78412 446 aaPredicted RBP30.92■■■□□ 2.54
SLIT3-204ENST00000518140 ZNF521Q96K83 1311 aa30.91■■■□□ 2.54
SLIT3-204ENST00000518140 NWD1Q149M9 1564 aa30.9■■■□□ 2.54
SLIT3-204ENST00000518140 RRS1Q15050 365 aaKnown RBP30.9■■■□□ 2.54
SLIT3-204ENST00000518140 U2SURPO15042 1029 aaKnown RBP30.89■■■□□ 2.54
SLIT3-204ENST00000518140 RUNDC1Q96C34 613 aa30.89■■■□□ 2.54
SLIT3-204ENST00000518140 DIAPH1O60610 1272 aaKnown RBP30.88■■■□□ 2.53
SLIT3-204ENST00000518140 LMTK3Q96Q04 1460 aa30.88■■■□□ 2.53
SLIT3-204ENST00000518140 MAP2P11137 1827 aaKnown RBP30.87■■■□□ 2.53
SLIT3-204ENST00000518140 AATKQ6ZMQ8 1374 aa30.87■■■□□ 2.53
SLIT3-204ENST00000518140 PHF8Q9UPP1 1060 aa30.86■■■□□ 2.53
SLIT3-204ENST00000518140 OVOS2A0A0J9YW53 1432 aa30.85■■■□□ 2.53
SLIT3-204ENST00000518140 OVOS2Q6IE36 1432 aa30.85■■■□□ 2.53
SLIT3-204ENST00000518140 TCP11L2Q8N4U5 519 aa30.85■■■□□ 2.53
SLIT3-204ENST00000518140 RRP7AQ9Y3A4 280 aaKnown RBP30.85■■■□□ 2.53
SLIT3-204ENST00000518140 TTC21AQ8NDW8 1320 aa30.84■■■□□ 2.53
SLIT3-204ENST00000518140 ESCO1Q5FWF5 840 aa30.83■■■□□ 2.53
SLIT3-204ENST00000518140 NEUROD2Q15784 382 aa30.82■■■□□ 2.52
SLIT3-204ENST00000518140 DMRT2Q9Y5R5 561 aa30.82■■■□□ 2.52
SLIT3-204ENST00000518140 SPINK5Q9NQ38 1064 aaPredicted RBP30.81■■■□□ 2.52
SLIT3-204ENST00000518140 SOX12O15370 315 aa30.8■■■□□ 2.52
SLIT3-204ENST00000518140 GOLGA2Q08379 1002 aa30.8■■■□□ 2.52
SLIT3-204ENST00000518140 PLEKHF1Q96S99 279 aa30.8■■■□□ 2.52
SLIT3-204ENST00000518140 ORAI2Q96SN7 254 aa30.8■■■□□ 2.52
SLIT3-204ENST00000518140 STRCP1A6NGW2 1772 aa30.79■■■□□ 2.52
SLIT3-204ENST00000518140 NUTM2GQ5VZR2 741 aa30.78■■■□□ 2.52
SLIT3-204ENST00000518140 IQSEC2Q5JU85 1478 aa30.77■■■□□ 2.52
SLIT3-204ENST00000518140 USP31Q70CQ4 1352 aa30.77■■■□□ 2.52
SLIT3-204ENST00000518140 IL13P35225 146 aa30.77■■■□□ 2.52
SLIT3-204ENST00000518140 WWC1Q8IX03 1113 aa30.77■■■□□ 2.52
SLIT3-204ENST00000518140 C19orf44Q9H6X5 657 aa30.77■■■□□ 2.52
SLIT3-204ENST00000518140 TMEM94Q12767 1356 aa30.76■■■□□ 2.52
SLIT3-204ENST00000518140 PAK3O75914 559 aaPredicted RBP30.76■■■□□ 2.51
SLIT3-204ENST00000518140 DUSP27Q5VZP5 1158 aa30.76■■■□□ 2.51
SLIT3-204ENST00000518140 SLFN5Q08AF3 891 aa30.75■■■□□ 2.51
SLIT3-204ENST00000518140 RNF123Q5XPI4 1314 aa30.75■■■□□ 2.51
SLIT3-204ENST00000518140 NLRP6P59044 892 aa30.75■■■□□ 2.51
SLIT3-204ENST00000518140 CDK12Q9NYV4 1490 aaPredicted RBP30.74■■■□□ 2.51
SLIT3-204ENST00000518140 NGEFQ8N5V2 710 aa30.74■■■□□ 2.51
SLIT3-204ENST00000518140 RCAN3Q9UKA8 241 aa30.74■■■□□ 2.51
SLIT3-204ENST00000518140 STRCQ7RTU9 1775 aa30.73■■■□□ 2.51
SLIT3-204ENST00000518140 PIK3C2AO00443 1686 aa30.73■■■□□ 2.51
SLIT3-204ENST00000518140 TRMT2AQ8IZ69 625 aaKnown RBP30.72■■■□□ 2.51
SLIT3-204ENST00000518140 ABTB2Q8N961 1025 aa30.72■■■□□ 2.51
SLIT3-204ENST00000518140 PSME1Q06323 249 aa30.71■■■□□ 2.51
SLIT3-204ENST00000518140 PHF23Q9BUL5 403 aaPredicted RBP30.71■■■□□ 2.51
SLIT3-204ENST00000518140 FOXO3O43524 673 aa30.7■■■□□ 2.5
SLIT3-204ENST00000518140 HMOX1P09601 288 aa30.7■■■□□ 2.5
SLIT3-204ENST00000518140 TSHZ2Q9NRE2 1034 aa30.7■■■□□ 2.5
SLIT3-204ENST00000518140 FCHSD2O94868 740 aa30.68■■■□□ 2.5
SLIT3-204ENST00000518140 XPCQ01831 940 aaPredicted RBP30.68■■■□□ 2.5
SLIT3-204ENST00000518140 RSPH6AQ9H0K4 717 aa30.68■■■□□ 2.5
SLIT3-204ENST00000518140 MAP3K19Q56UN5 1328 aa30.68■■■□□ 2.5
SLIT3-204ENST00000518140 HSP90AB2PQ58FF8 381 aa30.67■■■□□ 2.5
SLIT3-204ENST00000518140 PRKAR2BP31323 418 aa30.66■■■□□ 2.5
SLIT3-204ENST00000518140 TMPOP42166 694 aaKnown RBP30.66■■■□□ 2.5
SLIT3-204ENST00000518140 C1orf167Q5SNV9 1468 aa30.65■■■□□ 2.5
SLIT3-204ENST00000518140 EIF4A2Q14240 407 aaKnown RBP30.65■■■□□ 2.5
SLIT3-204ENST00000518140 PEAK1Q9H792 1746 aa30.65■■■□□ 2.5
SLIT3-204ENST00000518140 MAPK8IP3Q9UPT6 1336 aa30.64■■■□□ 2.5
SLIT3-204ENST00000518140 E9PSI1 815 aa30.64■■■□□ 2.5
SLIT3-204ENST00000518140 ATF3P18847 181 aa30.64■■■□□ 2.5
SLIT3-204ENST00000518140 CCDC27Q2M243 656 aa30.64■■■□□ 2.5
SLIT3-204ENST00000518140 PHACTR3Q96KR7 559 aa30.62■■■□□ 2.49
SLIT3-204ENST00000518140 LRRC7Q96NW7 1537 aa30.61■■■□□ 2.49
SLIT3-204ENST00000518140 ZNF335Q9H4Z2 1342 aaPredicted RBP30.61■■■□□ 2.49
SLIT3-204ENST00000518140 TRIM35Q9UPQ4 493 aa30.61■■■□□ 2.49
SLIT3-204ENST00000518140 MARF1Q9Y4F3 1742 aaKnown RBP30.61■■■□□ 2.49
SLIT3-204ENST00000518140 PNNQ9H307 717 aaKnown RBP30.6■■■□□ 2.49
SLIT3-204ENST00000518140 RRP1P56182 461 aaKnown RBP30.59■■■□□ 2.49
SLIT3-204ENST00000518140 WDR63Q8IWG1 891 aa30.59■■■□□ 2.49
SLIT3-204ENST00000518140 NCOA3Q9Y6Q9 1424 aa30.59■■■□□ 2.49
SLIT3-204ENST00000518140 NCBP3Q53F19 620 aaKnown RBP30.59■■■□□ 2.49
SLIT3-204ENST00000518140 MST1RQ04912 1400 aa30.58■■■□□ 2.49
SLIT3-204ENST00000518140 RIPK4P57078 832 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms