RNA–Protein interactions for RNA: ENST00000517992.1

SNTB1-202, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTB1, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-202ENST00000517992 NEUROD2Q15784 382 aa32.15■■■□□ 2.74
SNTB1-202ENST00000517992 RIMS2Q9UQ26 1411 aa32.15■■■□□ 2.74
SNTB1-202ENST00000517992 PANK1Q8TE04 598 aa32.15■■■□□ 2.74
SNTB1-202ENST00000517992 COL3A1P02461 1466 aaPredicted RBP32.14■■■□□ 2.74
SNTB1-202ENST00000517992 COG6Q9Y2V7 657 aa32.14■■■□□ 2.73
SNTB1-202ENST00000517992 LAS1LQ9Y4W2 734 aaKnown RBP32.13■■■□□ 2.73
SNTB1-202ENST00000517992 TMEM2Q9UHN6 1383 aa32.12■■■□□ 2.73
SNTB1-202ENST00000517992 CT47B1P0C2W7 299 aaPredicted RBP32.11■■■□□ 2.73
SNTB1-202ENST00000517992 YTHDC2Q9H6S0 1430 aaKnown RBP32.11■■■□□ 2.73
SNTB1-202ENST00000517992 NEFMP07197 916 aa32.1■■■□□ 2.73
SNTB1-202ENST00000517992 U2AF1L5P0DN76 240 aaPredicted RBP32.1■■■□□ 2.73
SNTB1-202ENST00000517992 U2AF1Q01081 240 aaKnown RBP eCLIP32.1■■■□□ 2.73
SNTB1-202ENST00000517992 PMFBP1Q8TBY8 1022 aa32.1■■■□□ 2.73
SNTB1-202ENST00000517992 CD163L1Q9NR16 1453 aa32.08■■■□□ 2.73
SNTB1-202ENST00000517992 THEMISQ8N1K5 641 aaPredicted RBP32.07■■■□□ 2.73
SNTB1-202ENST00000517992 FRAT1Q92837 279 aaPredicted RBP32.07■■■□□ 2.73
SNTB1-202ENST00000517992 TERF2IPQ9NYB0 399 aa32.07■■■□□ 2.73
SNTB1-202ENST00000517992 SRPK2P78362 688 aaKnown RBP32.07■■■□□ 2.72
SNTB1-202ENST00000517992 ALKQ9UM73 1620 aa32.06■■■□□ 2.72
SNTB1-202ENST00000517992 LTKP29376 864 aa32.05■■■□□ 2.72
SNTB1-202ENST00000517992 SLIT1O75093 1534 aa32.05■■■□□ 2.72
SNTB1-202ENST00000517992 ARHGAP23Q9P227 1491 aa32.04■■■□□ 2.72
SNTB1-202ENST00000517992 SAFB2Q14151 953 aaKnown RBP eCLIP32.02■■■□□ 2.72
SNTB1-202ENST00000517992 PLEKHF1Q96S99 279 aa32.02■■■□□ 2.72
SNTB1-202ENST00000517992 STK26Q9P289 416 aa32.02■■■□□ 2.72
SNTB1-202ENST00000517992 KIF20BQ96Q89 1820 aa32■■■□□ 2.71
SNTB1-202ENST00000517992 DLC1Q96QB1 1528 aa32■■■□□ 2.71
SNTB1-202ENST00000517992 RLBP1P12271 317 aa32■■■□□ 2.71
SNTB1-202ENST00000517992 TXNDC2Q86VQ3 553 aa32■■■□□ 2.71
SNTB1-202ENST00000517992 PRAM1Q96QH2 718 aa32■■■□□ 2.71
SNTB1-202ENST00000517992 ABCF1Q8NE71 845 aaKnown RBP eCLIP32■■■□□ 2.71
SNTB1-202ENST00000517992 IL16Q14005 1332 aa31.99■■■□□ 2.71
SNTB1-202ENST00000517992 CDC42BPGQ6DT37 1551 aa31.99■■■□□ 2.71
SNTB1-202ENST00000517992 FYB1O15117 783 aa31.98■■■□□ 2.71
SNTB1-202ENST00000517992 GGNBP2Q9H3C7 697 aa31.97■■■□□ 2.71
SNTB1-202ENST00000517992 POGKQ9P215 609 aa31.97■■■□□ 2.71
SNTB1-202ENST00000517992 PNPLA6Q8IY17 1366 aa31.97■■■□□ 2.71
SNTB1-202ENST00000517992 MINK1Q8N4C8 1332 aaPredicted RBP31.96■■■□□ 2.71
SNTB1-202ENST00000517992 HDGFP51858 240 aaKnown RBP31.96■■■□□ 2.71
SNTB1-202ENST00000517992 NRXN3Q9Y4C0 1643 aa31.95■■■□□ 2.71
SNTB1-202ENST00000517992 TMPOP42166 694 aaKnown RBP31.95■■■□□ 2.71
SNTB1-202ENST00000517992 HDGFL2Q7Z4V5 671 aaPredicted RBP31.95■■■□□ 2.71
SNTB1-202ENST00000517992 PCDHB15Q9Y5E8 787 aa31.95■■■□□ 2.71
SNTB1-202ENST00000517992 EID1Q9Y6B2 187 aa31.95■■■□□ 2.71
SNTB1-202ENST00000517992 ZKSCAN2Q63HK3 967 aa31.95■■■□□ 2.7
SNTB1-202ENST00000517992 MVPQ14764 893 aaKnown RBP31.94■■■□□ 2.7
SNTB1-202ENST00000517992 PNNQ9H307 717 aaKnown RBP31.93■■■□□ 2.7
SNTB1-202ENST00000517992 RWDD1Q9H446 243 aaPredicted RBP31.93■■■□□ 2.7
SNTB1-202ENST00000517992 USP19O94966 1318 aa31.93■■■□□ 2.7
SNTB1-202ENST00000517992 BCL2L13Q9BXK5 485 aa31.92■■■□□ 2.7
SNTB1-202ENST00000517992 TNNQ9UQP3 1299 aa31.92■■■□□ 2.7
SNTB1-202ENST00000517992 U2SURPO15042 1029 aaKnown RBP31.91■■■□□ 2.7
SNTB1-202ENST00000517992 TRIM35Q9UPQ4 493 aa31.91■■■□□ 2.7
SNTB1-202ENST00000517992 ATP7BP35670 1465 aa31.91■■■□□ 2.7
SNTB1-202ENST00000517992 LMTK3Q96Q04 1460 aa31.9■■■□□ 2.7
SNTB1-202ENST00000517992 HSPA2P54652 639 aa31.89■■■□□ 2.7
SNTB1-202ENST00000517992 SETD1AO15047 1707 aaKnown RBP31.89■■■□□ 2.7
SNTB1-202ENST00000517992 SLC4A3P48751 1232 aa31.88■■■□□ 2.69
SNTB1-202ENST00000517992 DZIP1LQ8IYY4 767 aaKnown RBP31.88■■■□□ 2.69
SNTB1-202ENST00000517992 PLEKHG1Q9ULL1 1385 aa31.88■■■□□ 2.69
SNTB1-202ENST00000517992 CDK19Q9BWU1 502 aa31.88■■■□□ 2.69
SNTB1-202ENST00000517992 DIAPH1O60610 1272 aaKnown RBP31.87■■■□□ 2.69
SNTB1-202ENST00000517992 NFKBIBQ15653 356 aa31.87■■■□□ 2.69
SNTB1-202ENST00000517992 ANKLE2Q86XL3 938 aa31.86■■■□□ 2.69
SNTB1-202ENST00000517992 FTSJ3Q8IY81 847 aaKnown RBP31.85■■■□□ 2.69
SNTB1-202ENST00000517992 TSR2Q969E8 191 aaKnown RBP31.85■■■□□ 2.69
SNTB1-202ENST00000517992 EXOSC9Q06265 439 aaKnown RBP31.84■■■□□ 2.69
SNTB1-202ENST00000517992 PDZRN3Q9UPQ7 1066 aa31.84■■■□□ 2.69
SNTB1-202ENST00000517992 ADAMTS13Q76LX8 1427 aa31.83■■■□□ 2.69
SNTB1-202ENST00000517992 SMC4Q9NTJ3 1288 aa31.83■■■□□ 2.69
SNTB1-202ENST00000517992 NCKAP5LQ9HCH0 1330 aa31.82■■■□□ 2.68
SNTB1-202ENST00000517992 SLC26A8Q96RN1 970 aa31.82■■■□□ 2.68
SNTB1-202ENST00000517992 LRRC7Q96NW7 1537 aa31.82■■■□□ 2.68
SNTB1-202ENST00000517992 CABP1Q9NZU7 370 aa31.8■■■□□ 2.68
SNTB1-202ENST00000517992 FCHSD2O94868 740 aa31.79■■■□□ 2.68
SNTB1-202ENST00000517992 METP08581 1390 aa31.79■■■□□ 2.68
SNTB1-202ENST00000517992 DDX19BQ9UMR2 479 aa31.79■■■□□ 2.68
SNTB1-202ENST00000517992 RIPK4P57078 832 aa31.78■■■□□ 2.68
SNTB1-202ENST00000517992 FAM135BQ49AJ0 1406 aa31.78■■■□□ 2.68
SNTB1-202ENST00000517992 TRIM27P14373 513 aa31.78■■■□□ 2.68
SNTB1-202ENST00000517992 SSH1Q8WYL5 1049 aa31.78■■■□□ 2.68
SNTB1-202ENST00000517992 SEC24BO95487 1268 aa31.77■■■□□ 2.68
SNTB1-202ENST00000517992 HDAC1Q13547 482 aaPredicted RBP31.77■■■□□ 2.68
SNTB1-202ENST00000517992 ATF7IPQ6VMQ6 1270 aa31.77■■■□□ 2.68
SNTB1-202ENST00000517992 KIF16BQ96L93 1317 aa31.76■■■□□ 2.67
SNTB1-202ENST00000517992 PPIP5K1Q6PFW1 1433 aa31.76■■■□□ 2.67
SNTB1-202ENST00000517992 BECN1Q14457 450 aa31.75■■■□□ 2.67
SNTB1-202ENST00000517992 UPF2Q9HAU5 1272 aaKnown RBP31.74■■■□□ 2.67
SNTB1-202ENST00000517992 ALDH1L2Q3SY69 923 aa31.73■■■□□ 2.67
SNTB1-202ENST00000517992 EIF5BO60841 1220 aaKnown RBP31.73■■■□□ 2.67
SNTB1-202ENST00000517992 NPHP4O75161 1426 aaPredicted RBP31.72■■■□□ 2.67
SNTB1-202ENST00000517992 ZNF428Q96B54 188 aa31.72■■■□□ 2.67
SNTB1-202ENST00000517992 CPSF1Q10570 1443 aaKnown RBP31.71■■■□□ 2.67
SNTB1-202ENST00000517992 EDC4Q6P2E9 1401 aaKnown RBP31.71■■■□□ 2.67
SNTB1-202ENST00000517992 RSPH6AQ9H0K4 717 aa31.71■■■□□ 2.67
SNTB1-202ENST00000517992 IPO8O15397 1037 aaKnown RBP31.7■■■□□ 2.67
SNTB1-202ENST00000517992 TBC1D32Q96NH3 1257 aa31.7■■■□□ 2.67
SNTB1-202ENST00000517992 KNDC1Q76NI1 1749 aa31.69■■■□□ 2.66
SNTB1-202ENST00000517992 POLKQ9UBT6 870 aa31.69■■■□□ 2.66
SNTB1-202ENST00000517992 BRPF1P55201 1214 aaPredicted RBP31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms