RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 KRT28Q7Z3Y7 464 aa16.47■□□□□ 0.23
AP3B1-203ENST00000517940 SBNO1A3KN83 1393 aa16.47■□□□□ 0.23
AP3B1-203ENST00000517940 NGDNQ8NEJ9 315 aaKnown RBP16.46■□□□□ 0.23
AP3B1-203ENST00000517940 MED1Q15648 1581 aaPredicted RBP16.46■□□□□ 0.23
AP3B1-203ENST00000517940 SPATA31A3Q5VYP0 1347 aa16.45■□□□□ 0.22
AP3B1-203ENST00000517940 POLR3GLQ9BT43 218 aa16.45■□□□□ 0.22
AP3B1-203ENST00000517940 KTN1Q86UP2 1357 aaKnown RBP16.45■□□□□ 0.22
AP3B1-203ENST00000517940 PNPLA6Q8IY17 1366 aa16.45■□□□□ 0.22
AP3B1-203ENST00000517940 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
AP3B1-203ENST00000517940 ILDR1Q86SU0 546 aaPredicted RBP16.44■□□□□ 0.22
AP3B1-203ENST00000517940 KIF20BQ96Q89 1820 aa16.44■□□□□ 0.22
AP3B1-203ENST00000517940 PHRF1Q9P1Y6 1649 aaKnown RBP16.44■□□□□ 0.22
AP3B1-203ENST00000517940 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
AP3B1-203ENST00000517940 TTC21BQ7Z4L5 1316 aa16.43■□□□□ 0.22
AP3B1-203ENST00000517940 PSME1Q06323 249 aa16.42■□□□□ 0.22
AP3B1-203ENST00000517940 PANK3Q9H999 370 aa16.42■□□□□ 0.22
AP3B1-203ENST00000517940 ZRANB1Q9UGI0 708 aa16.41■□□□□ 0.22
AP3B1-203ENST00000517940 LRP6O75581 1613 aa16.41■□□□□ 0.22
AP3B1-203ENST00000517940 SLIT3O75094 1523 aa16.4■□□□□ 0.22
AP3B1-203ENST00000517940 BRD4O60885 1362 aaPredicted RBP16.4■□□□□ 0.22
AP3B1-203ENST00000517940 OVOS2A0A0J9YW53 1432 aa16.4■□□□□ 0.22
AP3B1-203ENST00000517940 OVOS2Q6IE36 1432 aa16.4■□□□□ 0.22
AP3B1-203ENST00000517940 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
AP3B1-203ENST00000517940 ZNF692Q9BU19 519 aaPredicted RBP16.4■□□□□ 0.22
AP3B1-203ENST00000517940 TERF2IPQ9NYB0 399 aa16.4■□□□□ 0.22
AP3B1-203ENST00000517940 ANKRD26Q9UPS8 1709 aa16.39■□□□□ 0.21
AP3B1-203ENST00000517940 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
AP3B1-203ENST00000517940 NME9Q86XW9 330 aa16.39■□□□□ 0.21
AP3B1-203ENST00000517940 HDGFL2Q7Z4V5 671 aaPredicted RBP16.38■□□□□ 0.21
AP3B1-203ENST00000517940 NFAT5O94916 1531 aa16.38■□□□□ 0.21
AP3B1-203ENST00000517940 USP19O94966 1318 aa16.38■□□□□ 0.21
AP3B1-203ENST00000517940 USP31Q70CQ4 1352 aa16.38■□□□□ 0.21
AP3B1-203ENST00000517940 JCADQ9P266 1359 aa16.38■□□□□ 0.21
AP3B1-203ENST00000517940 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.37■□□□□ 0.21
AP3B1-203ENST00000517940 LRRC59Q96AG4 307 aaKnown RBP16.37■□□□□ 0.21
AP3B1-203ENST00000517940 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
AP3B1-203ENST00000517940 NUTM2GQ5VZR2 741 aa16.36■□□□□ 0.21
AP3B1-203ENST00000517940 ARHGEF10O15013 1369 aa16.36■□□□□ 0.21
AP3B1-203ENST00000517940 FYB1O15117 783 aa16.35■□□□□ 0.21
AP3B1-203ENST00000517940 PAK3O75914 559 aaPredicted RBP16.35■□□□□ 0.21
AP3B1-203ENST00000517940 AMER1Q5JTC6 1135 aaPredicted RBP16.35■□□□□ 0.21
AP3B1-203ENST00000517940 CABLES1Q8TDN4 633 aa16.34■□□□□ 0.21
AP3B1-203ENST00000517940 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
AP3B1-203ENST00000517940 ABTB2Q8N961 1025 aa16.32■□□□□ 0.2
AP3B1-203ENST00000517940 COL18A1P39060 1754 aa16.31■□□□□ 0.2
AP3B1-203ENST00000517940 GGNBP2Q9H3C7 697 aa16.31■□□□□ 0.2
AP3B1-203ENST00000517940 LMOD2Q6P5Q4 547 aa16.3■□□□□ 0.2
AP3B1-203ENST00000517940 PEAK1Q9H792 1746 aa16.3■□□□□ 0.2
AP3B1-203ENST00000517940 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
AP3B1-203ENST00000517940 NPC1L1Q9UHC9 1359 aa16.29■□□□□ 0.2
AP3B1-203ENST00000517940 LTN1O94822 1766 aa16.29■□□□□ 0.2
AP3B1-203ENST00000517940 FBLN1P23142 703 aa16.29■□□□□ 0.2
AP3B1-203ENST00000517940 NLRP6P59044 892 aa16.29■□□□□ 0.2
AP3B1-203ENST00000517940 CGNL1Q0VF96 1302 aa16.28■□□□□ 0.2
AP3B1-203ENST00000517940 SPATA31A6Q5VVP1 1343 aa16.28■□□□□ 0.2
AP3B1-203ENST00000517940 PLEKHG5O94827 1062 aa16.28■□□□□ 0.2
AP3B1-203ENST00000517940 PLCH1Q4KWH8 1693 aa16.27■□□□□ 0.2
AP3B1-203ENST00000517940 NSD2O96028 1365 aa16.26■□□□□ 0.19
AP3B1-203ENST00000517940 RGPD5Q99666 1765 aa16.26■□□□□ 0.19
AP3B1-203ENST00000517940 NRAPQ86VF7 1730 aa16.26■□□□□ 0.19
AP3B1-203ENST00000517940 GCP02774 474 aa16.26■□□□□ 0.19
AP3B1-203ENST00000517940 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
AP3B1-203ENST00000517940 CPDO75976 1380 aa16.26■□□□□ 0.19
AP3B1-203ENST00000517940 MAP2P11137 1827 aaKnown RBP16.25■□□□□ 0.19
AP3B1-203ENST00000517940 KNSTRNQ9Y448 316 aa16.25■□□□□ 0.19
AP3B1-203ENST00000517940 KIAA0232Q92628 1395 aa16.25■□□□□ 0.19
AP3B1-203ENST00000517940 NUTM2BA6NNL0 878 aaPredicted RBP16.24■□□□□ 0.19
AP3B1-203ENST00000517940 NUTM2EB1AL46 878 aaPredicted RBP16.24■□□□□ 0.19
AP3B1-203ENST00000517940 NUTM2AQ8IVF1 878 aaPredicted RBP16.24■□□□□ 0.19
AP3B1-203ENST00000517940 COL14A1Q05707 1796 aaKnown RBP16.23■□□□□ 0.19
AP3B1-203ENST00000517940 CAMTA1Q9Y6Y1 1673 aa16.23■□□□□ 0.19
AP3B1-203ENST00000517940 SLIT2O94813 1529 aa16.23■□□□□ 0.19
AP3B1-203ENST00000517940 SMG6Q86US8 1419 aaKnown RBP16.22■□□□□ 0.19
AP3B1-203ENST00000517940 SOX12O15370 315 aa16.22■□□□□ 0.19
AP3B1-203ENST00000517940 CC2D1BQ5T0F9 858 aaKnown RBP16.22■□□□□ 0.19
AP3B1-203ENST00000517940 ARHGEF25Q86VW2 580 aa16.22■□□□□ 0.19
AP3B1-203ENST00000517940 COG3Q96JB2 828 aa16.22■□□□□ 0.19
AP3B1-203ENST00000517940 PARD3Q8TEW0 1356 aa16.22■□□□□ 0.19
AP3B1-203ENST00000517940 NWD2Q9ULI1 1742 aa16.22■□□□□ 0.19
AP3B1-203ENST00000517940 FAM83GA6ND36 823 aa16.21■□□□□ 0.19
AP3B1-203ENST00000517940 ADAMTS2O95450 1211 aa16.21■□□□□ 0.19
AP3B1-203ENST00000517940 ZC3H6P61129 1189 aaKnown RBP16.21■□□□□ 0.19
AP3B1-203ENST00000517940 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
AP3B1-203ENST00000517940 MAP3K19Q56UN5 1328 aa16.2■□□□□ 0.18
AP3B1-203ENST00000517940 ABCC6O95255 1503 aa16.2■□□□□ 0.18
AP3B1-203ENST00000517940 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.2■□□□□ 0.18
AP3B1-203ENST00000517940 BCL9LQ86UU0 1499 aa16.19■□□□□ 0.18
AP3B1-203ENST00000517940 RRS1Q15050 365 aaKnown RBP16.19■□□□□ 0.18
AP3B1-203ENST00000517940 CHRNA2Q15822 529 aa16.19■□□□□ 0.18
AP3B1-203ENST00000517940 AXIN2Q9Y2T1 843 aa16.18■□□□□ 0.18
AP3B1-203ENST00000517940 EMILIN1Q9Y6C2 1016 aa16.18■□□□□ 0.18
AP3B1-203ENST00000517940 CNGB1Q14028 1251 aaPredicted RBP16.17■□□□□ 0.18
AP3B1-203ENST00000517940 KCNH5Q8NCM2 988 aa16.17■□□□□ 0.18
AP3B1-203ENST00000517940 POLKQ9UBT6 870 aa16.17■□□□□ 0.18
AP3B1-203ENST00000517940 RGS17Q9UGC6 210 aaPredicted RBP16.17■□□□□ 0.18
AP3B1-203ENST00000517940 RGPD2P0DJD1 1756 aa16.17■□□□□ 0.18
AP3B1-203ENST00000517940 COL3A1P02461 1466 aaPredicted RBP16.16■□□□□ 0.18
AP3B1-203ENST00000517940 COL5A2P05997 1499 aaPredicted RBP16.16■□□□□ 0.18
AP3B1-203ENST00000517940 TNNT2P45379 298 aaPredicted RBP16.16■□□□□ 0.18
AP3B1-203ENST00000517940 MORC1Q86VD1 984 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms