RNA–Protein interactions for RNA: ENST00000516183.1

SCARNA17-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 144 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17-201ENST00000516183 SPEGQ15772 3267 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 CSPG4Q6UVK1 2322 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 EYSQ5T1H1 3165 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 COL22A1Q8NFW1 1626 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 SPG11Q96JI7 2443 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 POTEB3A0JP26 581 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 KIAA1324LA8MWY0 1029 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 EPM2AB3EWF7 344 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 PRKNO60260 465 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 SLITRK3O94933 977 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 SLC34A2O95436 690 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 PRB1P04280 392 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 KRTAP1-4P0C5Y4 121 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 RXRBP28702 533 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 TRA2AQ13595 282 aaKnown RBP eCLIP-0.3□□□□□ -2.467e-6■■□□□ 11.7
SCARNA17-201ENST00000516183 KCNC3Q14003 757 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 RGL3Q3MIN7 710 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 CHADLQ6NUI6 762 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 POTEBQ6S5H4 581 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 USP43Q70EL4 1123 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 GAREM2Q75VX8 874 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 PTF1AQ7RTS3 328 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 MAFAQ8NHW3 353 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 SCARF2Q96GP6 870 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 TSG101Q99816 390 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 RNF19AQ9NV58 838 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 APOBP04114 4563 aaKnown RBP-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 NOTCH4Q99466 2003 aa-0.3□□□□□ -2.46
SCARNA17-201ENST00000516183 PCNTO95613 3336 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 PDE4DIPQ5VU43 2346 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 BRWD3Q6RI45 1802 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 AOX1Q06278 1338 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 CSMD2Q7Z408 3487 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 LOC400499M0QZD8 3231 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 SPTAN1Q13813 2472 aaKnown RBP-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 PKHD1P08F94 4074 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 HRO43593 1189 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 PPP1R37O75864 691 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 ADAMTS2O95450 1211 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 SP1P08047 785 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 RBM3P98179 157 aaKnown RBP-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 CKAP4Q07065 602 aaKnown RBP-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 SRSF5Q13243 272 aaKnown RBP-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 KCTD2Q14681 263 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 RBMY1FQ15415 496 aaKnown RBP-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 NFE2Q16621 373 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 INF2Q27J81 1249 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 KRTAP13-4Q3LI77 160 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 C3orf36Q3SXR2 165 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 ARHGAP17Q68EM7 881 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 FAM214BQ7L5A3 538 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 TRIM42Q8IWZ5 723 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 GAS2L2Q8NHY3 880 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 NKX2-3Q8TAU0 364 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 WBP2Q969T9 261 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 ZNF764Q96H86 408 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 ZIC5Q96T25 663 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 ADAM2Q99965 735 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 COL25A1Q9BXS0 654 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 BRINP2Q9C0B6 783 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 ZNF408Q9H9D4 720 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 EMILIN3Q9NT22 766 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 FAM212BQ9NTI7 297 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 IQSEC3Q9UPP2 1182 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 DNAH3Q8TD57 4116 aa-0.31□□□□□ -2.46
SCARNA17-201ENST00000516183 MGAQ8IWI9 3026 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 URB1O60287 2271 aaKnown RBP-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 LCE2BO14633 110 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 HOXD8P13378 290 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 PLAURQ03405 335 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 SFSWAPQ12872 951 aaKnown RBP-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 RNPS1Q15287 305 aaKnown RBP-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 HIST2H2BDQ6DRA6 164 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 CIARTQ8N365 385 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 FEZF2Q8TBJ5 459 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 NELL1Q92832 810 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 MEGF10Q96KG7 1140 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 SPRR2FQ96RM1 72 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 CAMKK2Q96RR4 588 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 MDFIQ99750 246 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 PYGO2Q9BRQ0 406 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 SPRY4Q9C004 299 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 ADAMTS5Q9UNA0 930 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 ALMS1Q8TCU4 4167 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 CADP27708 2225 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 ATRNL1Q5VV63 1379 aa-0.32□□□□□ -2.46
SCARNA17-201ENST00000516183 FREM2Q5SZK8 3169 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 DNAH2Q9P225 4427 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 CHD7Q9P2D1 2997 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 MUC3AQ02505 3323 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 IRS2Q9Y4H2 1338 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 SZT2Q5T011 3432 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 COL3A1P02461 1466 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 PLSCR5A0PG75 271 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 C1QTNF3-AMACRE9PGA6 284 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 TRIM66O15016 1216 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 LUC7L3O95232 432 aaKnown RBP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 HNRNPA1P09651 372 aaKnown RBP eCLIP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 NID1P14543 1247 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 HOXD3P31249 432 aaPredicted RBP-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms