RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 ADAMTS8Q9UP79 889 aa17.51■□□□□ 0.39
TRIO-222ENST00000515144 TSR2Q969E8 191 aaKnown RBP17.5■□□□□ 0.39
TRIO-222ENST00000515144 ZSCAN29Q8IWY8 852 aaPredicted RBP17.5■□□□□ 0.39
TRIO-222ENST00000515144 ARAP1Q96P48 1450 aa17.5■□□□□ 0.39
TRIO-222ENST00000515144 WASHC2AQ641Q2 1341 aa17.5■□□□□ 0.39
TRIO-222ENST00000515144 CENPQQ7L2Z9 268 aaPredicted RBP17.5■□□□□ 0.39
TRIO-222ENST00000515144 FOXO3O43524 673 aa17.49■□□□□ 0.39
TRIO-222ENST00000515144 TSR1Q2NL82 804 aaKnown RBP17.49■□□□□ 0.39
TRIO-222ENST00000515144 FBXO31Q5XUX0 539 aaPredicted RBP17.49■□□□□ 0.39
TRIO-222ENST00000515144 CUL7Q14999 1698 aa17.49■□□□□ 0.39
TRIO-222ENST00000515144 SURF6O75683 361 aaKnown RBP17.49■□□□□ 0.39
TRIO-222ENST00000515144 MPHOSPH8Q99549 860 aa17.49■□□□□ 0.39
TRIO-222ENST00000515144 WWC3Q9ULE0 1092 aa17.48■□□□□ 0.39
TRIO-222ENST00000515144 HDGFL1Q5TGJ6 251 aa17.48■□□□□ 0.39
TRIO-222ENST00000515144 VPS37CA5D8V6 355 aaPredicted RBP17.48■□□□□ 0.39
TRIO-222ENST00000515144 PHF14O94880 888 aa17.48■□□□□ 0.39
TRIO-222ENST00000515144 TPM2P07951 284 aa17.47■□□□□ 0.39
TRIO-222ENST00000515144 KIF21AQ7Z4S6 1674 aa17.47■□□□□ 0.39
TRIO-222ENST00000515144 PCF11O94913 1555 aaKnown RBP17.47■□□□□ 0.39
TRIO-222ENST00000515144 GOLGA6L19H0YKK7 550 aa17.47■□□□□ 0.39
TRIO-222ENST00000515144 ERC2O15083 957 aa17.47■□□□□ 0.39
TRIO-222ENST00000515144 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
TRIO-222ENST00000515144 FSD1Q9BTV5 496 aa17.47■□□□□ 0.39
TRIO-222ENST00000515144 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
TRIO-222ENST00000515144 CCAR2Q8N163 923 aaKnown RBP17.46■□□□□ 0.39
TRIO-222ENST00000515144 TBC1D2BQ9UPU7 963 aa17.46■□□□□ 0.39
TRIO-222ENST00000515144 PLB1Q6P1J6 1458 aa17.46■□□□□ 0.38
TRIO-222ENST00000515144 FKBP4Q02790 459 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRIO-222ENST00000515144 TPM3P06753 285 aa17.45■□□□□ 0.38
TRIO-222ENST00000515144 ATP2B1P20020 1258 aa17.45■□□□□ 0.38
TRIO-222ENST00000515144 PTMSP20962 102 aa17.45■□□□□ 0.38
TRIO-222ENST00000515144 BCL11BQ9C0K0 894 aaPredicted RBP17.45■□□□□ 0.38
TRIO-222ENST00000515144 PTPN23Q9H3S7 1636 aa17.44■□□□□ 0.38
TRIO-222ENST00000515144 MYCNP04198 464 aaPredicted RBP17.44■□□□□ 0.38
TRIO-222ENST00000515144 TCP11L2Q8N4U5 519 aa17.44■□□□□ 0.38
TRIO-222ENST00000515144 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
TRIO-222ENST00000515144 ZPR1O75312 459 aa17.44■□□□□ 0.38
TRIO-222ENST00000515144 DEKP35659 375 aaKnown RBP17.44■□□□□ 0.38
TRIO-222ENST00000515144 CHMP4BP1P59074 171 aa17.44■□□□□ 0.38
TRIO-222ENST00000515144 NUDT16Q96DE0 195 aaKnown RBP17.44■□□□□ 0.38
TRIO-222ENST00000515144 CCDC7Q96M83 1385 aa17.44■□□□□ 0.38
TRIO-222ENST00000515144 NOB1Q9ULX3 412 aaKnown RBP17.44■□□□□ 0.38
TRIO-222ENST00000515144 SLC52A1Q9NWF4 448 aa17.43■□□□□ 0.38
TRIO-222ENST00000515144 EFCAB5A4FU69 1503 aa17.43■□□□□ 0.38
TRIO-222ENST00000515144 CCDC57Q2TAC2 916 aa17.43■□□□□ 0.38
TRIO-222ENST00000515144 REC8O95072 547 aa17.43■□□□□ 0.38
TRIO-222ENST00000515144 BICD2Q8TD16 824 aa17.43■□□□□ 0.38
TRIO-222ENST00000515144 PIBF1Q8WXW3 757 aa17.43■□□□□ 0.38
TRIO-222ENST00000515144 BECN2A8MW95 431 aa17.43■□□□□ 0.38
TRIO-222ENST00000515144 PLEKHH2Q8IVE3 1493 aa17.42■□□□□ 0.38
TRIO-222ENST00000515144 TWISTNBQ3B726 338 aaPredicted RBP17.42■□□□□ 0.38
TRIO-222ENST00000515144 ADGRL1O94910 1474 aa17.42■□□□□ 0.38
TRIO-222ENST00000515144 CNTROBQ8N137 903 aa17.42■□□□□ 0.38
TRIO-222ENST00000515144 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
TRIO-222ENST00000515144 CDCA7LQ96GN5 454 aa17.42■□□□□ 0.38
TRIO-222ENST00000515144 EXOSC9Q06265 439 aaKnown RBP17.41■□□□□ 0.38
TRIO-222ENST00000515144 MPHOSPH10O00566 681 aaKnown RBP17.41■□□□□ 0.38
TRIO-222ENST00000515144 TROQ12816 1431 aaPredicted RBP17.4■□□□□ 0.38
TRIO-222ENST00000515144 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
TRIO-222ENST00000515144 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
TRIO-222ENST00000515144 CCDC158Q5M9N0 1113 aa17.4■□□□□ 0.38
TRIO-222ENST00000515144 R3HCC1Q9Y3T6 440 aaKnown RBP17.4■□□□□ 0.38
TRIO-222ENST00000515144 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
TRIO-222ENST00000515144 UBAP1LF5GYI3 381 aa17.4■□□□□ 0.38
TRIO-222ENST00000515144 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRIO-222ENST00000515144 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
TRIO-222ENST00000515144 ZBED9Q6R2W3 1325 aa17.39■□□□□ 0.37
TRIO-222ENST00000515144 PPP2R1AP30153 589 aa17.39■□□□□ 0.37
TRIO-222ENST00000515144 INTS3Q68E01 1043 aaKnown RBP17.39■□□□□ 0.37
TRIO-222ENST00000515144 TTLL12Q14166 644 aaPredicted RBP17.39■□□□□ 0.37
TRIO-222ENST00000515144 DCTN1Q14203 1278 aa17.39■□□□□ 0.37
TRIO-222ENST00000515144 HSP90AB4PQ58FF6 505 aa17.39■□□□□ 0.37
TRIO-222ENST00000515144 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
TRIO-222ENST00000515144 AMOTL2Q9Y2J4 779 aa17.39■□□□□ 0.37
TRIO-222ENST00000515144 CTTNBP2Q8WZ74 1663 aa17.39■□□□□ 0.37
TRIO-222ENST00000515144 GOLGA6L3A6NEY3 463 aa17.39■□□□□ 0.37
TRIO-222ENST00000515144 GNL3LQ9NVN8 582 aaKnown RBP17.39■□□□□ 0.37
TRIO-222ENST00000515144 FAM135AQ9P2D6 1515 aa17.39■□□□□ 0.37
TRIO-222ENST00000515144 SMC3Q9UQE7 1217 aa17.38■□□□□ 0.37
TRIO-222ENST00000515144 DAPK1P53355 1430 aa17.38■□□□□ 0.37
TRIO-222ENST00000515144 EPS15P42566 896 aa17.38■□□□□ 0.37
TRIO-222ENST00000515144 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
TRIO-222ENST00000515144 GRM1Q13255 1194 aa17.38■□□□□ 0.37
TRIO-222ENST00000515144 C8orf37Q96NL8 207 aa17.38■□□□□ 0.37
TRIO-222ENST00000515144 CCDC47Q96A33 483 aaKnown RBP17.37■□□□□ 0.37
TRIO-222ENST00000515144 SLC3A2P08195 630 aaKnown RBP17.37■□□□□ 0.37
TRIO-222ENST00000515144 ZFYVE27Q5T4F4 411 aa17.36■□□□□ 0.37
TRIO-222ENST00000515144 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
TRIO-222ENST00000515144 CEBPZQ03701 1054 aaKnown RBP17.36■□□□□ 0.37
TRIO-222ENST00000515144 STARD3NLO95772 234 aa17.36■□□□□ 0.37
TRIO-222ENST00000515144 BRMS1Q9HCU9 246 aa17.36■□□□□ 0.37
TRIO-222ENST00000515144 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
TRIO-222ENST00000515144 GNAI2P04899 355 aa17.36■□□□□ 0.37
TRIO-222ENST00000515144 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
TRIO-222ENST00000515144 STK3Q13188 491 aa17.35■□□□□ 0.37
TRIO-222ENST00000515144 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
TRIO-222ENST00000515144 MCM10Q7L590 875 aa17.35■□□□□ 0.37
TRIO-222ENST00000515144 CAMSAP2Q08AD1 1489 aa17.35■□□□□ 0.37
TRIO-222ENST00000515144 PDE4AP27815 886 aa17.35■□□□□ 0.37
TRIO-222ENST00000515144 TPM1P09493 284 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms