RNA–Protein interactions for RNA: ENST00000514951.5

SMN1-209, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2 BASIC

Gene SMN1, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-209ENST00000514951 CPSF1Q10570 1443 aaKnown RBP26.7■■□□□ 1.86
SMN1-209ENST00000514951 NINLQ9Y2I6 1382 aa26.7■■□□□ 1.86
SMN1-209ENST00000514951 SBNO1A3KN83 1393 aa26.68■■□□□ 1.86
SMN1-209ENST00000514951 MON2Q7Z3U7 1717 aa26.68■■□□□ 1.86
SMN1-209ENST00000514951 ALS2Q96Q42 1657 aa26.67■■□□□ 1.86
SMN1-209ENST00000514951 SPATA31A3Q5VYP0 1347 aa26.67■■□□□ 1.86
SMN1-209ENST00000514951 USP6P35125 1406 aa26.66■■□□□ 1.86
SMN1-209ENST00000514951 TNS3Q68CZ2 1445 aa26.66■■□□□ 1.86
SMN1-209ENST00000514951 C8orf37Q96NL8 207 aa26.66■■□□□ 1.86
SMN1-209ENST00000514951 AFF2P51816 1311 aa26.66■■□□□ 1.86
SMN1-209ENST00000514951 NRKQ7Z2Y5 1582 aa26.65■■□□□ 1.86
SMN1-209ENST00000514951 SSH2Q76I76 1423 aa26.64■■□□□ 1.85
SMN1-209ENST00000514951 COL22A1Q8NFW1 1626 aaPredicted RBP26.64■■□□□ 1.85
SMN1-209ENST00000514951 A0A1W2PP64 1363 aa26.63■■□□□ 1.85
SMN1-209ENST00000514951 KIF7Q2M1P5 1343 aa26.63■■□□□ 1.85
SMN1-209ENST00000514951 ADAMTS2O95450 1211 aa26.63■■□□□ 1.85
SMN1-209ENST00000514951 ZNF692Q9BU19 519 aaPredicted RBP26.63■■□□□ 1.85
SMN1-209ENST00000514951 KTN1Q86UP2 1357 aaKnown RBP26.62■■□□□ 1.85
SMN1-209ENST00000514951 POLR3GLQ9BT43 218 aa26.62■■□□□ 1.85
SMN1-209ENST00000514951 BRD4O60885 1362 aaPredicted RBP26.6■■□□□ 1.85
SMN1-209ENST00000514951 ANKRD36BQ8N2N9 1353 aa26.6■■□□□ 1.85
SMN1-209ENST00000514951 TERF2IPQ9NYB0 399 aa26.6■■□□□ 1.85
SMN1-209ENST00000514951 PAK3O75914 559 aaPredicted RBP26.59■■□□□ 1.85
SMN1-209ENST00000514951 RXRBP28702 533 aa26.59■■□□□ 1.85
SMN1-209ENST00000514951 HDGFL2Q7Z4V5 671 aaPredicted RBP26.59■■□□□ 1.85
SMN1-209ENST00000514951 WASHC2AQ641Q2 1341 aa26.57■■□□□ 1.84
SMN1-209ENST00000514951 ARHGEF10O15013 1369 aa26.57■■□□□ 1.84
SMN1-209ENST00000514951 CCDC7Q96M83 1385 aa26.57■■□□□ 1.84
SMN1-209ENST00000514951 NGLY1Q96IV0 654 aa26.57■■□□□ 1.84
SMN1-209ENST00000514951 PIK3C2AO00443 1686 aa26.56■■□□□ 1.84
SMN1-209ENST00000514951 TTC21BQ7Z4L5 1316 aa26.56■■□□□ 1.84
SMN1-209ENST00000514951 EDC4Q6P2E9 1401 aaKnown RBP26.55■■□□□ 1.84
SMN1-209ENST00000514951 LMOD2Q6P5Q4 547 aa26.55■■□□□ 1.84
SMN1-209ENST00000514951 ABCA3Q99758 1704 aa26.54■■□□□ 1.84
SMN1-209ENST00000514951 CRYBG1Q9Y4K1 1723 aa26.54■■□□□ 1.84
SMN1-209ENST00000514951 ABTB2Q8N961 1025 aa26.51■■□□□ 1.83
SMN1-209ENST00000514951 QTRT2Q9H974 415 aaKnown RBP26.51■■□□□ 1.83
SMN1-209ENST00000514951 TTC21AQ8NDW8 1320 aa26.51■■□□□ 1.83
SMN1-209ENST00000514951 MARF1Q9Y4F3 1742 aaKnown RBP26.51■■□□□ 1.83
SMN1-209ENST00000514951 NUTM2GQ5VZR2 741 aa26.5■■□□□ 1.83
SMN1-209ENST00000514951 CARD14Q9BXL6 1004 aa26.5■■□□□ 1.83
SMN1-209ENST00000514951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.49■■□□□ 1.83
SMN1-209ENST00000514951 CABLES1Q8TDN4 633 aa26.48■■□□□ 1.83
SMN1-209ENST00000514951 USP54Q70EL1 1684 aa26.47■■□□□ 1.83
SMN1-209ENST00000514951 PHRF1Q9P1Y6 1649 aaKnown RBP26.47■■□□□ 1.83
SMN1-209ENST00000514951 PANK3Q9H999 370 aa26.46■■□□□ 1.83
SMN1-209ENST00000514951 USP21Q9UK80 565 aa26.46■■□□□ 1.83
SMN1-209ENST00000514951 NSD3Q9BZ95 1437 aa26.46■■□□□ 1.83
SMN1-209ENST00000514951 PLEKHG5O94827 1062 aa26.45■■□□□ 1.83
SMN1-209ENST00000514951 RBM6P78332 1123 aaKnown RBP26.45■■□□□ 1.83
SMN1-209ENST00000514951 NME9Q86XW9 330 aa26.45■■□□□ 1.83
SMN1-209ENST00000514951 CDK12Q9NYV4 1490 aaPredicted RBP26.45■■□□□ 1.82
SMN1-209ENST00000514951 USP19O94966 1318 aa26.45■■□□□ 1.82
SMN1-209ENST00000514951 KIF20BQ96Q89 1820 aa26.43■■□□□ 1.82
SMN1-209ENST00000514951 USP31Q70CQ4 1352 aa26.43■■□□□ 1.82
SMN1-209ENST00000514951 NLRP6P59044 892 aa26.42■■□□□ 1.82
SMN1-209ENST00000514951 NLRP13Q86W25 1043 aa26.42■■□□□ 1.82
SMN1-209ENST00000514951 ZRANB1Q9UGI0 708 aa26.42■■□□□ 1.82
SMN1-209ENST00000514951 RGS12O14924 1447 aa26.42■■□□□ 1.82
SMN1-209ENST00000514951 SLIT3O75094 1523 aa26.42■■□□□ 1.82
SMN1-209ENST00000514951 HAP1P54257 671 aaPredicted RBP26.41■■□□□ 1.82
SMN1-209ENST00000514951 OVOS2A0A0J9YW53 1432 aa26.4■■□□□ 1.82
SMN1-209ENST00000514951 OVOS2Q6IE36 1432 aa26.4■■□□□ 1.82
SMN1-209ENST00000514951 TRPC5Q9UL62 973 aaPredicted RBP26.39■■□□□ 1.82
SMN1-209ENST00000514951 FYB1O15117 783 aa26.38■■□□□ 1.81
SMN1-209ENST00000514951 FNBP4Q8N3X1 1017 aaPredicted RBP26.38■■□□□ 1.81
SMN1-209ENST00000514951 UPF1Q92900 1129 aaKnown RBP eCLIP26.37■■□□□ 1.81
SMN1-209ENST00000514951 GCP02774 474 aa26.35■■□□□ 1.81
SMN1-209ENST00000514951 NFAT5O94916 1531 aa26.34■■□□□ 1.81
SMN1-209ENST00000514951 ATRNO75882 1429 aa26.34■■□□□ 1.81
SMN1-209ENST00000514951 GGNBP2Q9H3C7 697 aa26.34■■□□□ 1.81
SMN1-209ENST00000514951 CGNL1Q0VF96 1302 aa26.33■■□□□ 1.81
SMN1-209ENST00000514951 PER1O15534 1290 aaPredicted RBP26.33■■□□□ 1.81
SMN1-209ENST00000514951 ANKRD26Q9UPS8 1709 aa26.32■■□□□ 1.8
SMN1-209ENST00000514951 COG3Q96JB2 828 aa26.31■■□□□ 1.8
SMN1-209ENST00000514951 KIAA0232Q92628 1395 aa26.3■■□□□ 1.8
SMN1-209ENST00000514951 BCL9LQ86UU0 1499 aa26.3■■□□□ 1.8
SMN1-209ENST00000514951 ZC3H6P61129 1189 aaKnown RBP26.3■■□□□ 1.8
SMN1-209ENST00000514951 KNSTRNQ9Y448 316 aa26.3■■□□□ 1.8
SMN1-209ENST00000514951 PLCH1Q4KWH8 1693 aa26.3■■□□□ 1.8
SMN1-209ENST00000514951 CPDO75976 1380 aa26.3■■□□□ 1.8
SMN1-209ENST00000514951 COL14A1Q05707 1796 aaKnown RBP26.29■■□□□ 1.8
SMN1-209ENST00000514951 FAM83GA6ND36 823 aa26.28■■□□□ 1.8
SMN1-209ENST00000514951 SOX12O15370 315 aa26.28■■□□□ 1.8
SMN1-209ENST00000514951 KCNH5Q8NCM2 988 aa26.28■■□□□ 1.8
SMN1-209ENST00000514951 ZNF316A6NFI3 1004 aaPredicted RBP26.27■■□□□ 1.8
SMN1-209ENST00000514951 AMER1Q5JTC6 1135 aaPredicted RBP26.27■■□□□ 1.8
SMN1-209ENST00000514951 SLIT2O94813 1529 aa26.26■■□□□ 1.79
SMN1-209ENST00000514951 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.26■■□□□ 1.79
SMN1-209ENST00000514951 LTN1O94822 1766 aa26.25■■□□□ 1.79
SMN1-209ENST00000514951 NSD2O96028 1365 aa26.25■■□□□ 1.79
SMN1-209ENST00000514951 PRDM11Q9NQV5 511 aa26.25■■□□□ 1.79
SMN1-209ENST00000514951 NWD2Q9ULI1 1742 aa26.24■■□□□ 1.79
SMN1-209ENST00000514951 LMO7Q8WWI1 1683 aa26.24■■□□□ 1.79
SMN1-209ENST00000514951 UNC5CLQ8IV45 518 aa26.24■■□□□ 1.79
SMN1-209ENST00000514951 COL18A1P39060 1754 aa26.24■■□□□ 1.79
SMN1-209ENST00000514951 CHRNA2Q15822 529 aa26.23■■□□□ 1.79
SMN1-209ENST00000514951 ARHGEF25Q86VW2 580 aa26.23■■□□□ 1.79
SMN1-209ENST00000514951 GJD4Q96KN9 370 aaPredicted RBP26.23■■□□□ 1.79
SMN1-209ENST00000514951 NRAPQ86VF7 1730 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms