RNA–Protein interactions for RNA: ENST00000514488.1

MATR3-224, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-224ENST00000514488 MEX3CQ5U5Q3 659 aaKnown RBP13.58□□□□□ -0.24
MATR3-224ENST00000514488 BCANQ96GW7 911 aa13.58□□□□□ -0.24
MATR3-224ENST00000514488 RRP7BPQ9NSQ0 103 aa13.58□□□□□ -0.24
MATR3-224ENST00000514488 ADGRB3O60242 1522 aa13.58□□□□□ -0.24
MATR3-224ENST00000514488 ERBINQ96RT1 1412 aa13.57□□□□□ -0.24
MATR3-224ENST00000514488 PPP1R15BQ5SWA1 713 aa13.57□□□□□ -0.24
MATR3-224ENST00000514488 PTCD2Q8WV60 388 aaKnown RBP13.57□□□□□ -0.24
MATR3-224ENST00000514488 KHSRPQ92945 711 aaKnown RBP eCLIP13.57□□□□□ -0.245e-7■■□□□ 11.7
MATR3-224ENST00000514488 SHPRHQ149N8 1683 aa13.56□□□□□ -0.24
MATR3-224ENST00000514488 MYOM3Q5VTT5 1437 aa13.56□□□□□ -0.24
MATR3-224ENST00000514488 KANK4Q5T7N3 995 aaPredicted RBP13.55□□□□□ -0.24
MATR3-224ENST00000514488 GCC2Q8IWJ2 1684 aa13.54□□□□□ -0.24
MATR3-224ENST00000514488 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.54□□□□□ -0.24
MATR3-224ENST00000514488 MFSD10Q14728 455 aa13.54□□□□□ -0.24
MATR3-224ENST00000514488 ZNF772Q68DY9 489 aaPredicted RBP13.54□□□□□ -0.24
MATR3-224ENST00000514488 CADPS2Q86UW7 1296 aa13.54□□□□□ -0.24
MATR3-224ENST00000514488 KANK1Q14678 1352 aa13.54□□□□□ -0.24
MATR3-224ENST00000514488 ABCC5O15440 1437 aa13.54□□□□□ -0.24
MATR3-224ENST00000514488 NUDT7P0C024 238 aa13.53□□□□□ -0.24
MATR3-224ENST00000514488 VARS2Q5ST30 1063 aaKnown RBP13.53□□□□□ -0.24
MATR3-224ENST00000514488 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
MATR3-224ENST00000514488 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
MATR3-224ENST00000514488 LMTK2Q8IWU2 1503 aa13.53□□□□□ -0.24
MATR3-224ENST00000514488 ZNF316A6NFI3 1004 aaPredicted RBP13.52□□□□□ -0.25
MATR3-224ENST00000514488 PAXIP1Q6ZW49 1069 aaPredicted RBP13.52□□□□□ -0.25
MATR3-224ENST00000514488 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
MATR3-224ENST00000514488 FGD6Q6ZV73 1430 aa13.52□□□□□ -0.25
MATR3-224ENST00000514488 AHDC1Q5TGY3 1603 aaPredicted RBP13.52□□□□□ -0.25
MATR3-224ENST00000514488 PTPN23Q9H3S7 1636 aa13.51□□□□□ -0.25
MATR3-224ENST00000514488 NOS1P29475 1434 aa13.51□□□□□ -0.25
MATR3-224ENST00000514488 RXRBP28702 533 aa13.51□□□□□ -0.25
MATR3-224ENST00000514488 C14orf37Q86TY3 774 aa13.51□□□□□ -0.25
MATR3-224ENST00000514488 DIP2AQ14689 1571 aa13.5□□□□□ -0.25
MATR3-224ENST00000514488 ZFYVE9O95405 1425 aa13.5□□□□□ -0.25
MATR3-224ENST00000514488 NUTM2BA6NNL0 878 aaPredicted RBP13.5□□□□□ -0.25
MATR3-224ENST00000514488 NUTM2EB1AL46 878 aaPredicted RBP13.5□□□□□ -0.25
MATR3-224ENST00000514488 NUTM2AQ8IVF1 878 aaPredicted RBP13.5□□□□□ -0.25
MATR3-224ENST00000514488 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
MATR3-224ENST00000514488 TBC1D12O60347 775 aa13.49□□□□□ -0.25
MATR3-224ENST00000514488 DAPK1P53355 1430 aa13.48□□□□□ -0.25
MATR3-224ENST00000514488 VPS8Q8N3P4 1428 aa13.48□□□□□ -0.25
MATR3-224ENST00000514488 RIMS2Q9UQ26 1411 aa13.48□□□□□ -0.25
MATR3-224ENST00000514488 PLEKHG1Q9ULL1 1385 aa13.48□□□□□ -0.25
MATR3-224ENST00000514488 PPP1R15AO75807 674 aaPredicted RBP13.48□□□□□ -0.25
MATR3-224ENST00000514488 OXER1Q8TDS5 423 aa13.48□□□□□ -0.25
MATR3-224ENST00000514488 CHIC2Q9UKJ5 165 aa13.48□□□□□ -0.25
MATR3-224ENST00000514488 TMEM131LA2VDJ0 1609 aa13.47□□□□□ -0.25
MATR3-224ENST00000514488 PLSCR2Q9NRY7 297 aa13.47□□□□□ -0.25
MATR3-224ENST00000514488 AFF2P51816 1311 aa13.46□□□□□ -0.25
MATR3-224ENST00000514488 NUTM2DQ5VT03 806 aaPredicted RBP13.46□□□□□ -0.25
MATR3-224ENST00000514488 ZNF687Q8N1G0 1237 aa13.46□□□□□ -0.25
MATR3-224ENST00000514488 KRTAP3-3Q9BYR6 98 aa13.46□□□□□ -0.25
MATR3-224ENST00000514488 KRTAP3-2Q9BYR7 98 aa13.46□□□□□ -0.25
MATR3-224ENST00000514488 CDK12Q9NYV4 1490 aaPredicted RBP13.46□□□□□ -0.25
MATR3-224ENST00000514488 EP400Q96L91 3159 aa13.46□□□□□ -0.26
MATR3-224ENST00000514488 ATF3P18847 181 aa13.45□□□□□ -0.26
MATR3-224ENST00000514488 SLC52A1Q9NWF4 448 aa13.45□□□□□ -0.26
MATR3-224ENST00000514488 LHX6Q9UPM6 363 aa13.45□□□□□ -0.26
MATR3-224ENST00000514488 RGS12O14924 1447 aa13.45□□□□□ -0.26
MATR3-224ENST00000514488 BRINP3Q76B58 766 aa13.44□□□□□ -0.26
MATR3-224ENST00000514488 ADAMTS13Q76LX8 1427 aa13.44□□□□□ -0.26
MATR3-224ENST00000514488 NCOA3Q9Y6Q9 1424 aa13.43□□□□□ -0.26
MATR3-224ENST00000514488 ASXL1Q8IXJ9 1541 aa13.43□□□□□ -0.26
MATR3-224ENST00000514488 ANKRD30AQ9BXX3 1397 aa13.43□□□□□ -0.26
MATR3-224ENST00000514488 NHSL1Q5SYE7 1610 aa13.42□□□□□ -0.26
MATR3-224ENST00000514488 C19orf44Q9H6X5 657 aa13.42□□□□□ -0.26
MATR3-224ENST00000514488 TBX22Q9Y458 520 aa13.42□□□□□ -0.26
MATR3-224ENST00000514488 PSDA5PKW4 1024 aaPredicted RBP13.4□□□□□ -0.26
MATR3-224ENST00000514488 C8orf37Q96NL8 207 aa13.4□□□□□ -0.26
MATR3-224ENST00000514488 RPRD2Q5VT52 1461 aaKnown RBP13.4□□□□□ -0.26
MATR3-224ENST00000514488 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
MATR3-224ENST00000514488 DDX17Q92841 729 aaKnown RBP13.39□□□□□ -0.27
MATR3-224ENST00000514488 QTRT2Q9H974 415 aaKnown RBP13.39□□□□□ -0.27
MATR3-224ENST00000514488 TRPM2O94759 1503 aa13.39□□□□□ -0.27
MATR3-224ENST00000514488 E9PCH4 1651 aa13.38□□□□□ -0.27
MATR3-224ENST00000514488 UNC13BO14795 1591 aa13.38□□□□□ -0.27
MATR3-224ENST00000514488 HDGFP51858 240 aaKnown RBP13.38□□□□□ -0.27
MATR3-224ENST00000514488 SETD5Q9C0A6 1442 aa13.38□□□□□ -0.27
MATR3-224ENST00000514488 XRN1Q8IZH2 1706 aaKnown RBP13.37□□□□□ -0.27
MATR3-224ENST00000514488 RBM6P78332 1123 aaKnown RBP13.37□□□□□ -0.27
MATR3-224ENST00000514488 AMOTL2Q9Y2J4 779 aa13.37□□□□□ -0.27
MATR3-224ENST00000514488 MST1RQ04912 1400 aa13.37□□□□□ -0.27
MATR3-224ENST00000514488 PIK3R4Q99570 1358 aa13.36□□□□□ -0.27
MATR3-224ENST00000514488 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.36□□□□□ -0.27
MATR3-224ENST00000514488 SETBP1Q9Y6X0 1596 aa13.36□□□□□ -0.27
MATR3-224ENST00000514488 ADGRL2O95490 1459 aa13.36□□□□□ -0.27
MATR3-224ENST00000514488 NRXN3Q9Y4C0 1643 aa13.35□□□□□ -0.27
MATR3-224ENST00000514488 PNPLA6Q8IY17 1366 aa13.35□□□□□ -0.27
MATR3-224ENST00000514488 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
MATR3-224ENST00000514488 CAMK2BQ13554 666 aa13.35□□□□□ -0.27
MATR3-224ENST00000514488 EMILIN3Q9NT22 766 aa13.35□□□□□ -0.27
MATR3-224ENST00000514488 NALCNQ8IZF0 1738 aa13.34□□□□□ -0.27
MATR3-224ENST00000514488 DCCP43146 1447 aa13.34□□□□□ -0.27
MATR3-224ENST00000514488 ANKRD50Q9ULJ7 1429 aa13.34□□□□□ -0.27
MATR3-224ENST00000514488 ADAMTS2O95450 1211 aa13.34□□□□□ -0.27
MATR3-224ENST00000514488 PBX2P40425 430 aa13.33□□□□□ -0.28
MATR3-224ENST00000514488 SPNS2Q8IVW8 549 aa13.33□□□□□ -0.28
MATR3-224ENST00000514488 LRRC59Q96AG4 307 aaKnown RBP13.33□□□□□ -0.28
MATR3-224ENST00000514488 NGLY1Q96IV0 654 aa13.33□□□□□ -0.28
MATR3-224ENST00000514488 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms