RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 NME9Q86XW9 330 aa17.14■□□□□ 0.33
PVT1-203ENST00000513868 ADGRL3Q9HAR2 1447 aa17.14■□□□□ 0.33
PVT1-203ENST00000513868 LMTK3Q96Q04 1460 aa17.13■□□□□ 0.33
PVT1-203ENST00000513868 RBM33Q96EV2 1170 aaKnown RBP17.13■□□□□ 0.33
PVT1-203ENST00000513868 ZRANB1Q9UGI0 708 aa17.13■□□□□ 0.33
PVT1-203ENST00000513868 HSPA2P54652 639 aa17.11■□□□□ 0.33
PVT1-203ENST00000513868 TTC21BQ7Z4L5 1316 aa17.11■□□□□ 0.33
PVT1-203ENST00000513868 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
PVT1-203ENST00000513868 CFAP53Q96M91 514 aa17.1■□□□□ 0.33
PVT1-203ENST00000513868 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
PVT1-203ENST00000513868 PNPLA6Q8IY17 1366 aa17.1■□□□□ 0.33
PVT1-203ENST00000513868 MARF1Q9Y4F3 1742 aaKnown RBP17.09■□□□□ 0.33
PVT1-203ENST00000513868 FBLN1P23142 703 aa17.09■□□□□ 0.33
PVT1-203ENST00000513868 NUDCQ9Y266 331 aa17.09■□□□□ 0.33
PVT1-203ENST00000513868 PIK3C2AO00443 1686 aa17.09■□□□□ 0.33
PVT1-203ENST00000513868 OVOS2A0A0J9YW53 1432 aa17.08■□□□□ 0.32
PVT1-203ENST00000513868 OVOS2Q6IE36 1432 aa17.08■□□□□ 0.32
PVT1-203ENST00000513868 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
PVT1-203ENST00000513868 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
PVT1-203ENST00000513868 AATKQ6ZMQ8 1374 aa17.07■□□□□ 0.32
PVT1-203ENST00000513868 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
PVT1-203ENST00000513868 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
PVT1-203ENST00000513868 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
PVT1-203ENST00000513868 COG3Q96JB2 828 aa17.07■□□□□ 0.32
PVT1-203ENST00000513868 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
PVT1-203ENST00000513868 ZNF521Q96K83 1311 aa17.06■□□□□ 0.32
PVT1-203ENST00000513868 NGDNQ8NEJ9 315 aaKnown RBP17.05■□□□□ 0.32
PVT1-203ENST00000513868 TTC21AQ8NDW8 1320 aa17.04■□□□□ 0.32
PVT1-203ENST00000513868 APAF1O14727 1248 aa17.04■□□□□ 0.32
PVT1-203ENST00000513868 CDCA7LQ96GN5 454 aa17.04■□□□□ 0.32
PVT1-203ENST00000513868 IQSEC2Q5JU85 1478 aa17.04■□□□□ 0.32
PVT1-203ENST00000513868 PROSER2Q86WR7 435 aaPredicted RBP17.04■□□□□ 0.32
PVT1-203ENST00000513868 CDK12Q9NYV4 1490 aaPredicted RBP17.04■□□□□ 0.32
PVT1-203ENST00000513868 PEAK1Q9H792 1746 aa17.02■□□□□ 0.32
PVT1-203ENST00000513868 USP31Q70CQ4 1352 aa17.02■□□□□ 0.32
PVT1-203ENST00000513868 RUNDC1Q96C34 613 aa17.02■□□□□ 0.32
PVT1-203ENST00000513868 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.32
PVT1-203ENST00000513868 FKBP8Q14318 412 aa17.01■□□□□ 0.31
PVT1-203ENST00000513868 PHF8Q9UPP1 1060 aa17.01■□□□□ 0.31
PVT1-203ENST00000513868 DIAPH1O60610 1272 aaKnown RBP17.01■□□□□ 0.31
PVT1-203ENST00000513868 U2AF1L5P0DN76 240 aaPredicted RBP17.01■□□□□ 0.31
PVT1-203ENST00000513868 U2AF1Q01081 240 aaKnown RBP eCLIP17.01■□□□□ 0.319e-9■■■■■ 30
PVT1-203ENST00000513868 C14orf37Q86TY3 774 aa17■□□□□ 0.31
PVT1-203ENST00000513868 RRS1Q15050 365 aaKnown RBP16.99■□□□□ 0.31
PVT1-203ENST00000513868 NGEFQ8N5V2 710 aa16.99■□□□□ 0.31
PVT1-203ENST00000513868 NCOA3Q9Y6Q9 1424 aa16.99■□□□□ 0.31
PVT1-203ENST00000513868 TMEM94Q12767 1356 aa16.98■□□□□ 0.31
PVT1-203ENST00000513868 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
PVT1-203ENST00000513868 PLEKHF1Q96S99 279 aa16.98■□□□□ 0.31
PVT1-203ENST00000513868 C19orf44Q9H6X5 657 aa16.98■□□□□ 0.31
PVT1-203ENST00000513868 LRRC7Q96NW7 1537 aa16.98■□□□□ 0.31
PVT1-203ENST00000513868 RNF123Q5XPI4 1314 aa16.98■□□□□ 0.31
PVT1-203ENST00000513868 KIF1AQ12756 1690 aa16.98■□□□□ 0.31
PVT1-203ENST00000513868 U2SURPO15042 1029 aaKnown RBP16.97■□□□□ 0.31
PVT1-203ENST00000513868 TCP11L2Q8N4U5 519 aa16.97■□□□□ 0.31
PVT1-203ENST00000513868 NEFLP07196 543 aa16.97■□□□□ 0.31
PVT1-203ENST00000513868 ESCO1Q5FWF5 840 aa16.97■□□□□ 0.31
PVT1-203ENST00000513868 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
PVT1-203ENST00000513868 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.31
PVT1-203ENST00000513868 IL13P35225 146 aa16.96■□□□□ 0.31
PVT1-203ENST00000513868 ORAI2Q96SN7 254 aa16.96■□□□□ 0.31
PVT1-203ENST00000513868 C1orf167Q5SNV9 1468 aa16.96■□□□□ 0.3
PVT1-203ENST00000513868 RGPD1P0DJD0 1748 aa16.95■□□□□ 0.3
PVT1-203ENST00000513868 DCCP43146 1447 aa16.95■□□□□ 0.3
PVT1-203ENST00000513868 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
PVT1-203ENST00000513868 TRMT2AQ8IZ69 625 aaKnown RBP16.95■□□□□ 0.3
PVT1-203ENST00000513868 SLFN5Q08AF3 891 aa16.94■□□□□ 0.3
PVT1-203ENST00000513868 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
PVT1-203ENST00000513868 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
PVT1-203ENST00000513868 MST1RQ04912 1400 aa16.94■□□□□ 0.3
PVT1-203ENST00000513868 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
PVT1-203ENST00000513868 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
PVT1-203ENST00000513868 SPINK5Q9NQ38 1064 aaPredicted RBP16.94■□□□□ 0.3
PVT1-203ENST00000513868 LTN1O94822 1766 aa16.93■□□□□ 0.3
PVT1-203ENST00000513868 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
PVT1-203ENST00000513868 DLG5Q8TDM6 1919 aa16.92■□□□□ 0.3
PVT1-203ENST00000513868 NLRP6P59044 892 aa16.92■□□□□ 0.3
PVT1-203ENST00000513868 CCDC27Q2M243 656 aa16.92■□□□□ 0.3
PVT1-203ENST00000513868 RSPH6AQ9H0K4 717 aa16.92■□□□□ 0.3
PVT1-203ENST00000513868 FCHSD2O94868 740 aa16.91■□□□□ 0.3
PVT1-203ENST00000513868 IRX6P78412 446 aaPredicted RBP16.91■□□□□ 0.3
PVT1-203ENST00000513868 ABTB2Q8N961 1025 aa16.91■□□□□ 0.3
PVT1-203ENST00000513868 PSME1Q06323 249 aa16.91■□□□□ 0.3
PVT1-203ENST00000513868 RCAN3Q9UKA8 241 aa16.91■□□□□ 0.3
PVT1-203ENST00000513868 MAP3K19Q56UN5 1328 aa16.91■□□□□ 0.3
PVT1-203ENST00000513868 PAK3O75914 559 aaPredicted RBP16.9■□□□□ 0.3
PVT1-203ENST00000513868 NEUROD2Q15784 382 aa16.9■□□□□ 0.3
PVT1-203ENST00000513868 ALS2Q96Q42 1657 aa16.9■□□□□ 0.3
PVT1-203ENST00000513868 FOXO3O43524 673 aa16.89■□□□□ 0.29
PVT1-203ENST00000513868 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
PVT1-203ENST00000513868 NFAT5O94916 1531 aa16.88■□□□□ 0.29
PVT1-203ENST00000513868 SBNO1A3KN83 1393 aa16.88■□□□□ 0.29
PVT1-203ENST00000513868 SOX12O15370 315 aa16.88■□□□□ 0.29
PVT1-203ENST00000513868 ATF3P18847 181 aa16.88■□□□□ 0.29
PVT1-203ENST00000513868 TMPOP42166 694 aaKnown RBP16.88■□□□□ 0.29
PVT1-203ENST00000513868 EIF4A2Q14240 407 aaKnown RBP16.88■□□□□ 0.29
PVT1-203ENST00000513868 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
PVT1-203ENST00000513868 ZNF335Q9H4Z2 1342 aaPredicted RBP16.88■□□□□ 0.29
PVT1-203ENST00000513868 E9PSI1 815 aa16.88■□□□□ 0.29
PVT1-203ENST00000513868 PNNQ9H307 717 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms