RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 VSIG10Q8N0Z9 540 aa13.93□□□□□ -0.18
CDK7-210ENST00000513629 FBXO22Q8NEZ5 403 aa13.93□□□□□ -0.18
CDK7-210ENST00000513629 MEX3CQ5U5Q3 659 aaKnown RBP13.92□□□□□ -0.18
CDK7-210ENST00000513629 SETD1AO15047 1707 aaKnown RBP13.92□□□□□ -0.18
CDK7-210ENST00000513629 PTCH1Q13635 1447 aa13.91□□□□□ -0.18
CDK7-210ENST00000513629 NLRP6P59044 892 aa13.91□□□□□ -0.18
CDK7-210ENST00000513629 TRIM35Q9UPQ4 493 aa13.91□□□□□ -0.18
CDK7-210ENST00000513629 NHSL1Q5SYE7 1610 aa13.9□□□□□ -0.18
CDK7-210ENST00000513629 ROBO2Q9HCK4 1378 aa13.89□□□□□ -0.19
CDK7-210ENST00000513629 MKRN3Q13064 507 aaKnown RBP13.89□□□□□ -0.19
CDK7-210ENST00000513629 SETD5Q9C0A6 1442 aa13.89□□□□□ -0.19
CDK7-210ENST00000513629 PPLO60437 1756 aa13.88□□□□□ -0.19
CDK7-210ENST00000513629 ATMINO43313 823 aaPredicted RBP13.88□□□□□ -0.19
CDK7-210ENST00000513629 ATN1P54259 1190 aaPredicted RBP13.88□□□□□ -0.19
CDK7-210ENST00000513629 DDX17Q92841 729 aaKnown RBP13.88□□□□□ -0.19
CDK7-210ENST00000513629 KDM2AQ9Y2K7 1162 aa13.88□□□□□ -0.19
CDK7-210ENST00000513629 RPGRIP1LQ68CZ1 1315 aa13.88□□□□□ -0.19
CDK7-210ENST00000513629 NUTM2BA6NNL0 878 aaPredicted RBP13.87□□□□□ -0.19
CDK7-210ENST00000513629 NUTM2EB1AL46 878 aaPredicted RBP13.87□□□□□ -0.19
CDK7-210ENST00000513629 ASTLQ6HA08 431 aaPredicted RBP13.87□□□□□ -0.19
CDK7-210ENST00000513629 NUTM2AQ8IVF1 878 aaPredicted RBP13.87□□□□□ -0.19
CDK7-210ENST00000513629 CCDC144AA2RUR9 1427 aa13.87□□□□□ -0.19
CDK7-210ENST00000513629 PRAG1Q86YV5 1406 aa13.87□□□□□ -0.19
CDK7-210ENST00000513629 C1orf167Q5SNV9 1468 aa13.87□□□□□ -0.19
CDK7-210ENST00000513629 ZNF772Q68DY9 489 aaPredicted RBP13.85□□□□□ -0.19
CDK7-210ENST00000513629 MS4A4AQ96JQ5 239 aa13.85□□□□□ -0.19
CDK7-210ENST00000513629 LRRC59Q96AG4 307 aaKnown RBP13.84□□□□□ -0.19
CDK7-210ENST00000513629 PNPLA6Q8IY17 1366 aa13.83□□□□□ -0.19
CDK7-210ENST00000513629 SPATA31E1Q6ZUB1 1445 aa13.83□□□□□ -0.2
CDK7-210ENST00000513629 PPP1R37O75864 691 aa13.83□□□□□ -0.2
CDK7-210ENST00000513629 SP7Q8TDD2 431 aaPredicted RBP13.83□□□□□ -0.2
CDK7-210ENST00000513629 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.2
CDK7-210ENST00000513629 RGL3Q3MIN7 710 aa13.82□□□□□ -0.2
CDK7-210ENST00000513629 MPHOSPH9Q99550 1183 aa13.82□□□□□ -0.2
CDK7-210ENST00000513629 AFF2P51816 1311 aa13.82□□□□□ -0.2
CDK7-210ENST00000513629 ORAI2Q96SN7 254 aa13.81□□□□□ -0.2
CDK7-210ENST00000513629 LAMC1P11047 1609 aa13.81□□□□□ -0.2
CDK7-210ENST00000513629 IFT172Q9UG01 1749 aa13.81□□□□□ -0.2
CDK7-210ENST00000513629 CDC42BPGQ6DT37 1551 aa13.8□□□□□ -0.2
CDK7-210ENST00000513629 ANKRD30BQ9BXX2 1392 aa13.8□□□□□ -0.2
CDK7-210ENST00000513629 C8orf37Q96NL8 207 aa13.79□□□□□ -0.2
CDK7-210ENST00000513629 DCBLD2Q96PD2 775 aa13.79□□□□□ -0.2
CDK7-210ENST00000513629 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDK7-210ENST00000513629 PIK3C2GO75747 1445 aa13.79□□□□□ -0.2
CDK7-210ENST00000513629 RXRBP28702 533 aa13.78□□□□□ -0.2
CDK7-210ENST00000513629 STK26Q9P289 416 aa13.78□□□□□ -0.2
CDK7-210ENST00000513629 SOS2Q07890 1332 aaPredicted RBP13.78□□□□□ -0.2
CDK7-210ENST00000513629 TECPR2O15040 1411 aa13.78□□□□□ -0.2
CDK7-210ENST00000513629 LRPPRCP42704 1394 aaKnown RBP13.77□□□□□ -0.21
CDK7-210ENST00000513629 KNDC1Q76NI1 1749 aa13.76□□□□□ -0.21
CDK7-210ENST00000513629 CDK12Q9NYV4 1490 aaPredicted RBP13.76□□□□□ -0.21
CDK7-210ENST00000513629 ADAMTS2O95450 1211 aa13.76□□□□□ -0.21
CDK7-210ENST00000513629 PLEKHH1Q9ULM0 1364 aa13.75□□□□□ -0.21
CDK7-210ENST00000513629 ESCO1Q5FWF5 840 aa13.75□□□□□ -0.21
CDK7-210ENST00000513629 TMEM132EQ6IEE7 984 aa13.75□□□□□ -0.21
CDK7-210ENST00000513629 WAPLQ7Z5K2 1190 aa13.75□□□□□ -0.21
CDK7-210ENST00000513629 RGS12O14924 1447 aa13.74□□□□□ -0.21
CDK7-210ENST00000513629 NPHP3Q7Z494 1330 aa13.74□□□□□ -0.21
CDK7-210ENST00000513629 IER5LQ5T953 404 aa13.74□□□□□ -0.21
CDK7-210ENST00000513629 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
CDK7-210ENST00000513629 PXDNQ92626 1479 aa13.74□□□□□ -0.21
CDK7-210ENST00000513629 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
CDK7-210ENST00000513629 ABCC11Q96J66 1382 aa13.73□□□□□ -0.21
CDK7-210ENST00000513629 COL22A1Q8NFW1 1626 aaPredicted RBP13.73□□□□□ -0.21
CDK7-210ENST00000513629 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
CDK7-210ENST00000513629 UPF1Q92900 1129 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDK7-210ENST00000513629 RAB3GAP2Q9H2M9 1393 aa13.72□□□□□ -0.21
CDK7-210ENST00000513629 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
CDK7-210ENST00000513629 XPCQ01831 940 aaPredicted RBP13.72□□□□□ -0.21
CDK7-210ENST00000513629 NGLY1Q96IV0 654 aa13.72□□□□□ -0.21
CDK7-210ENST00000513629 QTRT2Q9H974 415 aaKnown RBP13.72□□□□□ -0.21
CDK7-210ENST00000513629 MYOM2P54296 1465 aa13.72□□□□□ -0.21
CDK7-210ENST00000513629 NRXN1Q9ULB1 1477 aa13.72□□□□□ -0.21
CDK7-210ENST00000513629 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
CDK7-210ENST00000513629 FOXO3O43524 673 aa13.71□□□□□ -0.21
CDK7-210ENST00000513629 RBM6P78332 1123 aaKnown RBP13.71□□□□□ -0.21
CDK7-210ENST00000513629 FMN2Q9NZ56 1722 aa13.7□□□□□ -0.22
CDK7-210ENST00000513629 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
CDK7-210ENST00000513629 PDCD7Q8N8D1 485 aaKnown RBP13.7□□□□□ -0.22
CDK7-210ENST00000513629 C14orf93Q9H972 538 aaKnown RBP13.69□□□□□ -0.22
CDK7-210ENST00000513629 USP21Q9UK80 565 aa13.69□□□□□ -0.22
CDK7-210ENST00000513629 CFAP70Q5T0N1 1121 aa13.68□□□□□ -0.22
CDK7-210ENST00000513629 KIF1AQ12756 1690 aa13.68□□□□□ -0.22
CDK7-210ENST00000513629 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
CDK7-210ENST00000513629 OCEL1Q9H607 264 aa13.67□□□□□ -0.22
CDK7-210ENST00000513629 DHX57Q6P158 1386 aaKnown RBP13.67□□□□□ -0.22
CDK7-210ENST00000513629 FNBP4Q8N3X1 1017 aaPredicted RBP13.66□□□□□ -0.22
CDK7-210ENST00000513629 TRPC5Q9UL62 973 aaPredicted RBP13.66□□□□□ -0.22
CDK7-210ENST00000513629 ATRNO75882 1429 aa13.65□□□□□ -0.22
CDK7-210ENST00000513629 SAFB2Q14151 953 aaKnown RBP eCLIP13.65□□□□□ -0.22
CDK7-210ENST00000513629 SIRT1Q96EB6 747 aa13.65□□□□□ -0.22
CDK7-210ENST00000513629 PRAM1Q96QH2 718 aa13.65□□□□□ -0.22
CDK7-210ENST00000513629 EP400Q96L91 3159 aa13.65□□□□□ -0.23
CDK7-210ENST00000513629 MARF1Q9Y4F3 1742 aaKnown RBP13.64□□□□□ -0.23
CDK7-210ENST00000513629 DLC1Q96QB1 1528 aa13.64□□□□□ -0.23
CDK7-210ENST00000513629 SPATA31A3Q5VYP0 1347 aa13.64□□□□□ -0.23
CDK7-210ENST00000513629 ADGRB1O14514 1584 aa13.63□□□□□ -0.23
CDK7-210ENST00000513629 BCL9LQ86UU0 1499 aa13.63□□□□□ -0.23
CDK7-210ENST00000513629 PLCG2P16885 1265 aa13.63□□□□□ -0.23
CDK7-210ENST00000513629 SLC39A7Q92504 469 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms