RNA–Protein interactions for RNA: ENST00000512445.5

SRPK1-212, Transcript of SRSF protein kinase 1, humanhuman

TSL 5

Gene SRPK1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-212ENST00000512445 TULP4Q9NRJ4 1543 aa9.34□□□□□ -0.91
SRPK1-212ENST00000512445 USP32Q8NFA0 1604 aa9.34□□□□□ -0.91
SRPK1-212ENST00000512445 ARHGEF28Q8N1W1 1705 aaKnown RBP9.34□□□□□ -0.92
SRPK1-212ENST00000512445 SOX12O15370 315 aa9.33□□□□□ -0.92
SRPK1-212ENST00000512445 RBM6P78332 1123 aaKnown RBP9.33□□□□□ -0.92
SRPK1-212ENST00000512445 CHRNA2Q15822 529 aa9.33□□□□□ -0.92
SRPK1-212ENST00000512445 FNBP4Q8N3X1 1017 aaPredicted RBP9.33□□□□□ -0.92
SRPK1-212ENST00000512445 ABTB2Q8N961 1025 aa9.33□□□□□ -0.92
SRPK1-212ENST00000512445 TRPC5Q9UL62 973 aaPredicted RBP9.33□□□□□ -0.92
SRPK1-212ENST00000512445 SBNO1A3KN83 1393 aa9.33□□□□□ -0.92
SRPK1-212ENST00000512445 PPIP5K1Q6PFW1 1433 aa9.32□□□□□ -0.92
SRPK1-212ENST00000512445 ST20-MTHFSA0A0A6YYL1 179 aa9.32□□□□□ -0.92
SRPK1-212ENST00000512445 A0A0G2JS52 829 aa9.32□□□□□ -0.92
SRPK1-212ENST00000512445 PLEKHG3A1L390 1219 aa9.32□□□□□ -0.92
SRPK1-212ENST00000512445 MYT1Q01538 1121 aa9.32□□□□□ -0.92
SRPK1-212ENST00000512445 ARHGEF10O15013 1369 aa9.32□□□□□ -0.92
SRPK1-212ENST00000512445 ATP7BP35670 1465 aa9.32□□□□□ -0.92
SRPK1-212ENST00000512445 UNC5CLQ8IV45 518 aa9.31□□□□□ -0.92
SRPK1-212ENST00000512445 PRDM11Q9NQV5 511 aa9.31□□□□□ -0.92
SRPK1-212ENST00000512445 STRN4Q9NRL3 753 aa9.31□□□□□ -0.92
SRPK1-212ENST00000512445 BTG4Q9NY30 223 aa9.31□□□□□ -0.92
SRPK1-212ENST00000512445 ADGRB2O60241 1585 aa9.31□□□□□ -0.92
SRPK1-212ENST00000512445 KIF1AQ12756 1690 aa9.31□□□□□ -0.92
SRPK1-212ENST00000512445 KIAA1210Q9ULL0 1709 aa9.31□□□□□ -0.92
SRPK1-212ENST00000512445 TRPM1Q7Z4N2 1603 aa9.31□□□□□ -0.92
SRPK1-212ENST00000512445 NLRP6P59044 892 aa9.3□□□□□ -0.92
SRPK1-212ENST00000512445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.3□□□□□ -0.92
SRPK1-212ENST00000512445 GJD4Q96KN9 370 aaPredicted RBP9.3□□□□□ -0.92
SRPK1-212ENST00000512445 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
SRPK1-212ENST00000512445 SLC12A5Q9H2X9 1139 aa9.29□□□□□ -0.92
SRPK1-212ENST00000512445 ZRANB1Q9UGI0 708 aa9.29□□□□□ -0.92
SRPK1-212ENST00000512445 BCL9LQ86UU0 1499 aa9.28□□□□□ -0.92
SRPK1-212ENST00000512445 ATXN8OSP0DMR3 200 aa9.28□□□□□ -0.92
SRPK1-212ENST00000512445 EVA1CP58658 441 aa9.28□□□□□ -0.92
SRPK1-212ENST00000512445 USP35Q9P2H5 1018 aa9.28□□□□□ -0.92
SRPK1-212ENST00000512445 QRICH2Q9H0J4 1663 aa9.28□□□□□ -0.92
SRPK1-212ENST00000512445 RALGAPBQ86X10 1494 aa9.28□□□□□ -0.92
SRPK1-212ENST00000512445 POLR3AO14802 1390 aaPredicted RBP9.27□□□□□ -0.93
SRPK1-212ENST00000512445 KIAA0232Q92628 1395 aa9.27□□□□□ -0.93
SRPK1-212ENST00000512445 FAM98CQ17RN3 349 aaKnown RBP9.27□□□□□ -0.93
SRPK1-212ENST00000512445 NLRP13Q86W25 1043 aa9.27□□□□□ -0.93
SRPK1-212ENST00000512445 UPF1Q92900 1129 aaKnown RBP eCLIP9.27□□□□□ -0.93
SRPK1-212ENST00000512445 RGS12O14924 1447 aa9.27□□□□□ -0.93
SRPK1-212ENST00000512445 ATRNO75882 1429 aa9.27□□□□□ -0.93
SRPK1-212ENST00000512445 COL22A1Q8NFW1 1626 aaPredicted RBP9.27□□□□□ -0.93
SRPK1-212ENST00000512445 GCP02774 474 aa9.26□□□□□ -0.93
SRPK1-212ENST00000512445 SEPT12Q8IYM1 358 aa9.26□□□□□ -0.93
SRPK1-212ENST00000512445 TTC21BQ7Z4L5 1316 aa9.26□□□□□ -0.93
SRPK1-212ENST00000512445 KTN1Q86UP2 1357 aaKnown RBP9.25□□□□□ -0.93
SRPK1-212ENST00000512445 VPS72Q15906 364 aa9.25□□□□□ -0.93
SRPK1-212ENST00000512445 FAM182BQ5T319 152 aa9.25□□□□□ -0.93
SRPK1-212ENST00000512445 HDGFL2Q7Z4V5 671 aaPredicted RBP9.25□□□□□ -0.93
SRPK1-212ENST00000512445 NME9Q86XW9 330 aa9.25□□□□□ -0.93
SRPK1-212ENST00000512445 TESK2Q96S53 571 aa9.25□□□□□ -0.93
SRPK1-212ENST00000512445 USP47Q96K76 1375 aa9.24□□□□□ -0.93
SRPK1-212ENST00000512445 ZNF692Q9BU19 519 aaPredicted RBP9.24□□□□□ -0.93
SRPK1-212ENST00000512445 TRPM3Q9HCF6 1732 aaPredicted RBP9.24□□□□□ -0.93
SRPK1-212ENST00000512445 SLIT2O94813 1529 aa9.24□□□□□ -0.93
SRPK1-212ENST00000512445 ATAD2Q6PL18 1390 aa9.24□□□□□ -0.93
SRPK1-212ENST00000512445 USP6P35125 1406 aa9.23□□□□□ -0.93
SRPK1-212ENST00000512445 TMF1P82094 1093 aa9.23□□□□□ -0.93
SRPK1-212ENST00000512445 LARP1Q6PKG0 1096 aaKnown RBP9.23□□□□□ -0.93
SRPK1-212ENST00000512445 ITSN1Q15811 1721 aa9.22□□□□□ -0.93
SRPK1-212ENST00000512445 TERF2IPQ9NYB0 399 aa9.22□□□□□ -0.93
SRPK1-212ENST00000512445 CLSPNQ9HAW4 1339 aa9.22□□□□□ -0.93
SRPK1-212ENST00000512445 TOPAZ1Q8N9V7 1692 aa9.21□□□□□ -0.93
SRPK1-212ENST00000512445 ALS2Q96Q42 1657 aa9.21□□□□□ -0.93
SRPK1-212ENST00000512445 CSB-PGBD3P0DP91 1061 aa9.21□□□□□ -0.94
SRPK1-212ENST00000512445 FBLN1P23142 703 aa9.21□□□□□ -0.94
SRPK1-212ENST00000512445 KRT27Q7Z3Y8 459 aa9.21□□□□□ -0.94
SRPK1-212ENST00000512445 TIMELESSQ9UNS1 1208 aa9.21□□□□□ -0.94
SRPK1-212ENST00000512445 U3KPZ7 1027 aaPredicted RBP9.21□□□□□ -0.94
SRPK1-212ENST00000512445 USP19O94966 1318 aa9.21□□□□□ -0.94
SRPK1-212ENST00000512445 HSPA5P11021 654 aaKnown RBP9.2□□□□□ -0.94
SRPK1-212ENST00000512445 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
SRPK1-212ENST00000512445 AXIN2Q9Y2T1 843 aa9.2□□□□□ -0.94
SRPK1-212ENST00000512445 SPATA31A5Q5VU36 1347 aa9.2□□□□□ -0.94
SRPK1-212ENST00000512445 SPATA31A7Q8IWB4 1347 aa9.2□□□□□ -0.94
SRPK1-212ENST00000512445 CDK12Q9NYV4 1490 aaPredicted RBP9.2□□□□□ -0.94
SRPK1-212ENST00000512445 TOM1L2Q6ZVM7 507 aa9.19□□□□□ -0.94
SRPK1-212ENST00000512445 LTV1Q96GA3 475 aaPredicted RBP9.19□□□□□ -0.94
SRPK1-212ENST00000512445 TTC21AQ8NDW8 1320 aa9.19□□□□□ -0.94
SRPK1-212ENST00000512445 A0A1W2PP64 1363 aa9.19□□□□□ -0.94
SRPK1-212ENST00000512445 SBNO2Q9Y2G9 1366 aa9.19□□□□□ -0.94
SRPK1-212ENST00000512445 CPSF1Q10570 1443 aaKnown RBP9.19□□□□□ -0.94
SRPK1-212ENST00000512445 SSH2Q76I76 1423 aa9.19□□□□□ -0.94
SRPK1-212ENST00000512445 GLI3P10071 1580 aa9.19□□□□□ -0.94
SRPK1-212ENST00000512445 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
SRPK1-212ENST00000512445 SPATA31A1Q5TZJ5 1347 aa9.18□□□□□ -0.94
SRPK1-212ENST00000512445 KCNH5Q8NCM2 988 aa9.18□□□□□ -0.94
SRPK1-212ENST00000512445 ABCA3Q99758 1704 aa9.18□□□□□ -0.94
SRPK1-212ENST00000512445 GGNBP2Q9H3C7 697 aa9.18□□□□□ -0.94
SRPK1-212ENST00000512445 MARF1Q9Y4F3 1742 aaKnown RBP9.18□□□□□ -0.94
SRPK1-212ENST00000512445 PLCH1Q4KWH8 1693 aa9.17□□□□□ -0.94
SRPK1-212ENST00000512445 CD163L1Q9NR16 1453 aa9.17□□□□□ -0.94
SRPK1-212ENST00000512445 BRD4O60885 1362 aaPredicted RBP9.17□□□□□ -0.94
SRPK1-212ENST00000512445 ONECUT3O60422 494 aaPredicted RBP9.17□□□□□ -0.94
SRPK1-212ENST00000512445 DEFB132Q7Z7B7 95 aa9.17□□□□□ -0.94
SRPK1-212ENST00000512445 ARHGEF25Q86VW2 580 aa9.17□□□□□ -0.94
SRPK1-212ENST00000512445 TCP11L2Q8N4U5 519 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms