RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 DUSP27Q5VZP5 1158 aa17.86■□□□□ 0.45
SNCAIP-217ENST00000512385 A0A1W2PP64 1363 aa17.86■□□□□ 0.45
SNCAIP-217ENST00000512385 WASLO00401 505 aaPredicted RBP17.86■□□□□ 0.45
SNCAIP-217ENST00000512385 PPP2R1AP30153 589 aa17.86■□□□□ 0.45
SNCAIP-217ENST00000512385 FAM43AQ8N2R8 423 aa17.86■□□□□ 0.45
SNCAIP-217ENST00000512385 SLIT1O75093 1534 aa17.86■□□□□ 0.45
SNCAIP-217ENST00000512385 TBX22Q9Y458 520 aa17.85■□□□□ 0.45
SNCAIP-217ENST00000512385 PRR36Q9H6K5 1346 aa17.84■□□□□ 0.45
SNCAIP-217ENST00000512385 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
SNCAIP-217ENST00000512385 BCAR3O75815 825 aa17.84■□□□□ 0.45
SNCAIP-217ENST00000512385 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
SNCAIP-217ENST00000512385 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-217ENST00000512385 IGHDP01880 384 aa17.83■□□□□ 0.44
SNCAIP-217ENST00000512385 ZRANB1Q9UGI0 708 aa17.83■□□□□ 0.44
SNCAIP-217ENST00000512385 USP19O94966 1318 aa17.83■□□□□ 0.44
SNCAIP-217ENST00000512385 SETD1BQ9UPS6 1966 aaKnown RBP17.83■□□□□ 0.44
SNCAIP-217ENST00000512385 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
SNCAIP-217ENST00000512385 PMFBP1Q8TBY8 1022 aa17.83■□□□□ 0.44
SNCAIP-217ENST00000512385 RSPH6AQ9H0K4 717 aa17.83■□□□□ 0.44
SNCAIP-217ENST00000512385 MED14O60244 1454 aa17.82■□□□□ 0.44
SNCAIP-217ENST00000512385 SPRYD3Q8NCJ5 442 aa17.82■□□□□ 0.44
SNCAIP-217ENST00000512385 BLMP54132 1417 aaPredicted RBP17.81■□□□□ 0.44
SNCAIP-217ENST00000512385 MORC1Q86VD1 984 aa17.81■□□□□ 0.44
SNCAIP-217ENST00000512385 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
SNCAIP-217ENST00000512385 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
SNCAIP-217ENST00000512385 FYB1O15117 783 aa17.78■□□□□ 0.44
SNCAIP-217ENST00000512385 GZF1Q9H116 711 aaPredicted RBP17.78■□□□□ 0.44
SNCAIP-217ENST00000512385 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.78■□□□□ 0.44
SNCAIP-217ENST00000512385 PLEKHG5O94827 1062 aa17.77■□□□□ 0.43
SNCAIP-217ENST00000512385 GOLGA2Q08379 1002 aa17.77■□□□□ 0.43
SNCAIP-217ENST00000512385 CGNL1Q0VF96 1302 aa17.76■□□□□ 0.43
SNCAIP-217ENST00000512385 PPIP5K1Q6PFW1 1433 aa17.76■□□□□ 0.43
SNCAIP-217ENST00000512385 DMRT2Q9Y5R5 561 aa17.76■□□□□ 0.43
SNCAIP-217ENST00000512385 ATAD2Q6PL18 1390 aa17.76■□□□□ 0.43
SNCAIP-217ENST00000512385 TECPR2O15040 1411 aa17.76■□□□□ 0.43
SNCAIP-217ENST00000512385 SOX12O15370 315 aa17.76■□□□□ 0.43
SNCAIP-217ENST00000512385 NME9Q86XW9 330 aa17.76■□□□□ 0.43
SNCAIP-217ENST00000512385 TERF2IPQ9NYB0 399 aa17.76■□□□□ 0.43
SNCAIP-217ENST00000512385 CCDC61Q9Y6R9 512 aa17.76■□□□□ 0.43
SNCAIP-217ENST00000512385 DLC1Q96QB1 1528 aa17.76■□□□□ 0.43
SNCAIP-217ENST00000512385 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNCAIP-217ENST00000512385 PANK2Q9BZ23 570 aa17.75■□□□□ 0.43
SNCAIP-217ENST00000512385 MTHFSP49914 203 aa17.74■□□□□ 0.43
SNCAIP-217ENST00000512385 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
SNCAIP-217ENST00000512385 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
SNCAIP-217ENST00000512385 FAM135BQ49AJ0 1406 aa17.74■□□□□ 0.43
SNCAIP-217ENST00000512385 PANK1Q8TE04 598 aa17.72■□□□□ 0.43
SNCAIP-217ENST00000512385 NPHP4O75161 1426 aaPredicted RBP17.72■□□□□ 0.43
SNCAIP-217ENST00000512385 CPS1P31327 1500 aa17.72■□□□□ 0.43
SNCAIP-217ENST00000512385 APAF1O14727 1248 aa17.72■□□□□ 0.43
SNCAIP-217ENST00000512385 SLFN5Q08AF3 891 aa17.71■□□□□ 0.43
SNCAIP-217ENST00000512385 COG6Q9Y2V7 657 aa17.71■□□□□ 0.43
SNCAIP-217ENST00000512385 ACEP12821 1306 aa17.71■□□□□ 0.43
SNCAIP-217ENST00000512385 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
SNCAIP-217ENST00000512385 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
SNCAIP-217ENST00000512385 ZNF521Q96K83 1311 aa17.71■□□□□ 0.42
SNCAIP-217ENST00000512385 SIRT1Q96EB6 747 aa17.7■□□□□ 0.42
SNCAIP-217ENST00000512385 XRCC6P12956 609 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNCAIP-217ENST00000512385 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.69■□□□□ 0.42
SNCAIP-217ENST00000512385 NAP1L5Q96NT1 182 aaPredicted RBP17.69■□□□□ 0.42
SNCAIP-217ENST00000512385 ATP7BP35670 1465 aa17.69■□□□□ 0.42
SNCAIP-217ENST00000512385 ZNF142P52746 1687 aaPredicted RBP17.68■□□□□ 0.42
SNCAIP-217ENST00000512385 XPCQ01831 940 aaPredicted RBP17.68■□□□□ 0.42
SNCAIP-217ENST00000512385 TNNQ9UQP3 1299 aa17.67■□□□□ 0.42
SNCAIP-217ENST00000512385 ANTXR1Q9H6X2 564 aa17.67■□□□□ 0.42
SNCAIP-217ENST00000512385 NPC1L1Q9UHC9 1359 aa17.66■□□□□ 0.42
SNCAIP-217ENST00000512385 RRS1Q15050 365 aaKnown RBP17.66■□□□□ 0.42
SNCAIP-217ENST00000512385 PROSER2Q86WR7 435 aaPredicted RBP17.66■□□□□ 0.42
SNCAIP-217ENST00000512385 NGDNQ8NEJ9 315 aaKnown RBP17.66■□□□□ 0.42
SNCAIP-217ENST00000512385 NKTRP30414 1462 aaKnown RBP17.66■□□□□ 0.42
SNCAIP-217ENST00000512385 KNDC1Q76NI1 1749 aa17.65■□□□□ 0.42
SNCAIP-217ENST00000512385 TBC1D2Q9BYX2 928 aa17.65■□□□□ 0.42
SNCAIP-217ENST00000512385 RGPD8O14715 1765 aaPredicted RBP17.64■□□□□ 0.42
SNCAIP-217ENST00000512385 NEUROD2Q15784 382 aa17.64■□□□□ 0.41
SNCAIP-217ENST00000512385 ORAI2Q96SN7 254 aa17.64■□□□□ 0.41
SNCAIP-217ENST00000512385 EMILIN1Q9Y6C2 1016 aa17.64■□□□□ 0.41
SNCAIP-217ENST00000512385 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
SNCAIP-217ENST00000512385 PKNOX2Q96KN3 472 aa17.64■□□□□ 0.41
SNCAIP-217ENST00000512385 PTCH1Q13635 1447 aa17.63■□□□□ 0.41
SNCAIP-217ENST00000512385 CPSF1Q10570 1443 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-217ENST00000512385 BECN1Q14457 450 aa17.63■□□□□ 0.41
SNCAIP-217ENST00000512385 ESCO1Q5FWF5 840 aa17.63■□□□□ 0.41
SNCAIP-217ENST00000512385 RRP7AQ9Y3A4 280 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-217ENST00000512385 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
SNCAIP-217ENST00000512385 DDX17Q92841 729 aaKnown RBP17.62■□□□□ 0.41
SNCAIP-217ENST00000512385 BCL2L13Q9BXK5 485 aa17.62■□□□□ 0.41
SNCAIP-217ENST00000512385 XRN1Q8IZH2 1706 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-217ENST00000512385 NINLQ9Y2I6 1382 aa17.61■□□□□ 0.41
SNCAIP-217ENST00000512385 U2SURPO15042 1029 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-217ENST00000512385 DIP2AQ14689 1571 aa17.6■□□□□ 0.41
SNCAIP-217ENST00000512385 CLUAP1Q96AJ1 413 aa17.6■□□□□ 0.41
SNCAIP-217ENST00000512385 L1TD1Q5T7N2 865 aaKnown RBP17.6■□□□□ 0.41
SNCAIP-217ENST00000512385 TRMT2AQ8IZ69 625 aaKnown RBP17.6■□□□□ 0.41
SNCAIP-217ENST00000512385 CHD2O14647 1828 aaKnown RBP17.59■□□□□ 0.41
SNCAIP-217ENST00000512385 GOLGA6L3A6NEY3 463 aa17.59■□□□□ 0.41
SNCAIP-217ENST00000512385 FOXO3O43524 673 aa17.59■□□□□ 0.41
SNCAIP-217ENST00000512385 PNNQ9H307 717 aaKnown RBP17.59■□□□□ 0.41
SNCAIP-217ENST00000512385 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
SNCAIP-217ENST00000512385 POLKQ9UBT6 870 aa17.59■□□□□ 0.41
SNCAIP-217ENST00000512385 PCDHB15Q9Y5E8 787 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms