RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 DHX29Q7Z478 1369 aaKnown RBP14.14□□□□□ -0.15
SNF8-211ENST00000512243 RNF17Q9BXT8 1623 aaKnown RBP14.13□□□□□ -0.15
SNF8-211ENST00000512243 WNT2BQ93097 391 aa14.13□□□□□ -0.15
SNF8-211ENST00000512243 SEPT9Q9UHD8 586 aaPredicted RBP14.13□□□□□ -0.15
SNF8-211ENST00000512243 HFM1A2PYH4 1435 aa14.13□□□□□ -0.15
SNF8-211ENST00000512243 PTPN5P54829 565 aa14.12□□□□□ -0.15
SNF8-211ENST00000512243 ANKRD50Q9ULJ7 1429 aa14.12□□□□□ -0.15
SNF8-211ENST00000512243 NAIPQ13075 1403 aa14.11□□□□□ -0.15
SNF8-211ENST00000512243 TSKSQ9UJT2 592 aa14.11□□□□□ -0.15
SNF8-211ENST00000512243 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
SNF8-211ENST00000512243 ARID4BQ4LE39 1312 aaPredicted RBP14.11□□□□□ -0.15
SNF8-211ENST00000512243 FER1L4A9Z1Z3 1794 aa14.1□□□□□ -0.15
SNF8-211ENST00000512243 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
SNF8-211ENST00000512243 THSD4Q6ZMP0 1018 aa14.09□□□□□ -0.15
SNF8-211ENST00000512243 UNC13BO14795 1591 aa14.09□□□□□ -0.15
SNF8-211ENST00000512243 ONECUT3O60422 494 aaPredicted RBP14.08□□□□□ -0.16
SNF8-211ENST00000512243 CDCA7LQ96GN5 454 aa14.08□□□□□ -0.16
SNF8-211ENST00000512243 PRDM15P57071 1507 aaPredicted RBP14.07□□□□□ -0.16
SNF8-211ENST00000512243 SEMA3EO15041 775 aa14.07□□□□□ -0.16
SNF8-211ENST00000512243 MROH1Q8NDA8 1641 aa14.07□□□□□ -0.16
SNF8-211ENST00000512243 ZC3H13Q5T200 1668 aaKnown RBP14.07□□□□□ -0.16
SNF8-211ENST00000512243 CEP152O94986 1710 aa14.07□□□□□ -0.16
SNF8-211ENST00000512243 FAM135AQ9P2D6 1515 aa14.06□□□□□ -0.16
SNF8-211ENST00000512243 KIF3BO15066 747 aa14.06□□□□□ -0.16
SNF8-211ENST00000512243 PRSS12P56730 875 aa14.06□□□□□ -0.16
SNF8-211ENST00000512243 FAM198AQ9UFP1 575 aa14.06□□□□□ -0.16
SNF8-211ENST00000512243 SETD5Q9C0A6 1442 aa14.06□□□□□ -0.16
SNF8-211ENST00000512243 ADAMTSL3P82987 1691 aa14.05□□□□□ -0.16
SNF8-211ENST00000512243 CERKQ8TCT0 537 aa14.05□□□□□ -0.16
SNF8-211ENST00000512243 MADDQ8WXG6 1647 aa14.04□□□□□ -0.16
SNF8-211ENST00000512243 MLECQ14165 292 aa14.04□□□□□ -0.16
SNF8-211ENST00000512243 LAPTM4BQ86VI4 370 aa14.04□□□□□ -0.16
SNF8-211ENST00000512243 PACS2Q86VP3 889 aa14.04□□□□□ -0.16
SNF8-211ENST00000512243 ANKK1Q8NFD2 765 aa14.04□□□□□ -0.16
SNF8-211ENST00000512243 KDM5DQ9BY66 1539 aa14.04□□□□□ -0.16
SNF8-211ENST00000512243 CLTCQ00610 1675 aaKnown RBP14.04□□□□□ -0.16
SNF8-211ENST00000512243 RIMS1Q86UR5 1692 aaKnown RBP14.04□□□□□ -0.16
SNF8-211ENST00000512243 ZFRQ96KR1 1074 aaKnown RBP14.03□□□□□ -0.16
SNF8-211ENST00000512243 IQGAP3Q86VI3 1631 aa14.03□□□□□ -0.16
SNF8-211ENST00000512243 MROH2AA6NES4 1674 aa14.03□□□□□ -0.16
SNF8-211ENST00000512243 KANK1Q14678 1352 aa14.02□□□□□ -0.17
SNF8-211ENST00000512243 RAB3GAP2Q9H2M9 1393 aa14.02□□□□□ -0.17
SNF8-211ENST00000512243 SMAPO00193 183 aa14.02□□□□□ -0.17
SNF8-211ENST00000512243 BCAMP50895 628 aa14.02□□□□□ -0.17
SNF8-211ENST00000512243 GGT6Q6P531 493 aa14.02□□□□□ -0.17
SNF8-211ENST00000512243 VWDEQ8N2E2 1590 aa14.01□□□□□ -0.17
SNF8-211ENST00000512243 FAM98CQ17RN3 349 aaKnown RBP14.01□□□□□ -0.17
SNF8-211ENST00000512243 NPDC1Q9NQX5 325 aaPredicted RBP14.01□□□□□ -0.17
SNF8-211ENST00000512243 CAMSAP1Q5T5Y3 1602 aa14.01□□□□□ -0.17
SNF8-211ENST00000512243 ABCC3O15438 1527 aa14□□□□□ -0.17
SNF8-211ENST00000512243 C3orf80F5H4A9 247 aa14□□□□□ -0.17
SNF8-211ENST00000512243 TET3O43151 1660 aa14□□□□□ -0.17
SNF8-211ENST00000512243 CNTLNQ9NXG0 1405 aa13.99□□□□□ -0.17
SNF8-211ENST00000512243 PCGF6Q9BYE7 350 aa13.99□□□□□ -0.17
SNF8-211ENST00000512243 ESF1Q9H501 851 aaKnown RBP13.99□□□□□ -0.17
SNF8-211ENST00000512243 ACIN1Q9UKV3 1341 aaKnown RBP13.98□□□□□ -0.17
SNF8-211ENST00000512243 PLA2G2EQ9NZK7 142 aa13.98□□□□□ -0.17
SNF8-211ENST00000512243 LMTK2Q8IWU2 1503 aa13.97□□□□□ -0.17
SNF8-211ENST00000512243 PADI6Q6TGC4 694 aa13.97□□□□□ -0.17
SNF8-211ENST00000512243 PNMA3Q9UL41 463 aa13.97□□□□□ -0.17
SNF8-211ENST00000512243 CFAP65Q6ZU64 1925 aaKnown RBP13.97□□□□□ -0.17
SNF8-211ENST00000512243 C3P01024 1663 aa13.97□□□□□ -0.17
SNF8-211ENST00000512243 NUP155O75694 1391 aa13.96□□□□□ -0.17
SNF8-211ENST00000512243 EFCAB6Q5THR3 1501 aa13.96□□□□□ -0.17
SNF8-211ENST00000512243 TRIM52Q96A61 297 aa13.96□□□□□ -0.17
SNF8-211ENST00000512243 WASHC2CQ9Y4E1 1318 aa13.95□□□□□ -0.18
SNF8-211ENST00000512243 NUTM2FA1L443 756 aa13.95□□□□□ -0.18
SNF8-211ENST00000512243 SOWAHBA6NEL2 793 aa13.95□□□□□ -0.18
SNF8-211ENST00000512243 NBPF26B4DH59 902 aa13.95□□□□□ -0.18
SNF8-211ENST00000512243 TATDN2Q93075 761 aa13.95□□□□□ -0.18
SNF8-211ENST00000512243 VSIG10Q8N0Z9 540 aa13.94□□□□□ -0.18
SNF8-211ENST00000512243 RBM27Q9P2N5 1060 aaKnown RBP13.94□□□□□ -0.18
SNF8-211ENST00000512243 E9PCH4 1651 aa13.94□□□□□ -0.18
SNF8-211ENST00000512243 HRCP23327 699 aa13.93□□□□□ -0.18
SNF8-211ENST00000512243 NUDT18Q6ZVK8 323 aa13.93□□□□□ -0.18
SNF8-211ENST00000512243 PZPP20742 1482 aa13.93□□□□□ -0.18
SNF8-211ENST00000512243 TESPA1A2RU30 521 aaPredicted RBP13.92□□□□□ -0.18
SNF8-211ENST00000512243 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.92□□□□□ -0.18
SNF8-211ENST00000512243 PREX1Q8TCU6 1659 aa13.91□□□□□ -0.18
SNF8-211ENST00000512243 PTGDRQ13258 359 aa13.91□□□□□ -0.18
SNF8-211ENST00000512243 LRCH3Q96II8 777 aa13.91□□□□□ -0.18
SNF8-211ENST00000512243 PTPRMP28827 1452 aa13.91□□□□□ -0.18
SNF8-211ENST00000512243 SPHKAPQ2M3C7 1700 aa13.9□□□□□ -0.18
SNF8-211ENST00000512243 TTC13Q8NBP0 860 aa13.9□□□□□ -0.18
SNF8-211ENST00000512243 RPRD2Q5VT52 1461 aaKnown RBP13.9□□□□□ -0.18
SNF8-211ENST00000512243 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.19
SNF8-211ENST00000512243 ZMYM3Q14202 1370 aa13.89□□□□□ -0.19
SNF8-211ENST00000512243 WBP1LQ9NX94 342 aa13.89□□□□□ -0.19
SNF8-211ENST00000512243 NPATQ14207 1427 aa13.89□□□□□ -0.19
SNF8-211ENST00000512243 SETD1BQ9UPS6 1966 aaKnown RBP13.89□□□□□ -0.19
SNF8-211ENST00000512243 RBM26Q5T8P6 1007 aaKnown RBP13.88□□□□□ -0.19
SNF8-211ENST00000512243 SAMD7Q7Z3H4 446 aa13.88□□□□□ -0.19
SNF8-211ENST00000512243 HPS5Q9UPZ3 1129 aa13.88□□□□□ -0.19
SNF8-211ENST00000512243 ERVK-7P63135 1459 aa13.87□□□□□ -0.19
SNF8-211ENST00000512243 SPATA31D1Q6ZQQ2 1576 aa13.87□□□□□ -0.19
SNF8-211ENST00000512243 MPHOSPH9Q99550 1183 aa13.85□□□□□ -0.19
SNF8-211ENST00000512243 MYO3AQ8NEV4 1616 aa13.84□□□□□ -0.19
SNF8-211ENST00000512243 SYNMO15061 1565 aa13.83□□□□□ -0.19
SNF8-211ENST00000512243 CEBPAP49715 358 aaPredicted RBP13.83□□□□□ -0.2
SNF8-211ENST00000512243 TSR3Q9UJK0 312 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms