RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 RIMS1Q86UR5 1692 aaKnown RBP6.59□□□□□ -1.35
TRAPPC11-208ENST00000511955 DUOX2Q9NRD8 1548 aa6.59□□□□□ -1.35
TRAPPC11-208ENST00000511955 PLXNC1O60486 1568 aa6.59□□□□□ -1.35
TRAPPC11-208ENST00000511955 TCF3P15923 654 aa6.59□□□□□ -1.36
TRAPPC11-208ENST00000511955 VTI1AQ96AJ9 217 aa6.59□□□□□ -1.36
TRAPPC11-208ENST00000511955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.59□□□□□ -1.36
TRAPPC11-208ENST00000511955 FBXO31Q5XUX0 539 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC11-208ENST00000511955 PTPRMP28827 1452 aa6.58□□□□□ -1.36
TRAPPC11-208ENST00000511955 PLCD3Q8N3E9 789 aa6.58□□□□□ -1.36
TRAPPC11-208ENST00000511955 UBXN4Q92575 508 aa6.58□□□□□ -1.36
TRAPPC11-208ENST00000511955 ARHGEF1Q92888 912 aaKnown RBP6.58□□□□□ -1.36
TRAPPC11-208ENST00000511955 STAG3Q9UJ98 1225 aa6.58□□□□□ -1.36
TRAPPC11-208ENST00000511955 FER1L4A9Z1Z3 1794 aa6.57□□□□□ -1.36
TRAPPC11-208ENST00000511955 ADGRL2O95490 1459 aa6.57□□□□□ -1.36
TRAPPC11-208ENST00000511955 NAIPQ13075 1403 aa6.57□□□□□ -1.36
TRAPPC11-208ENST00000511955 ERBINQ96RT1 1412 aa6.57□□□□□ -1.36
TRAPPC11-208ENST00000511955 PPFIA4O75335 1185 aa6.57□□□□□ -1.36
TRAPPC11-208ENST00000511955 PHF14O94880 888 aa6.57□□□□□ -1.36
TRAPPC11-208ENST00000511955 SKIV2LQ15477 1246 aaKnown RBP6.57□□□□□ -1.36
TRAPPC11-208ENST00000511955 CLTCQ00610 1675 aaKnown RBP6.57□□□□□ -1.36
TRAPPC11-208ENST00000511955 REREQ9P2R6 1566 aa6.57□□□□□ -1.36
TRAPPC11-208ENST00000511955 AGLP35573 1532 aa6.57□□□□□ -1.36
TRAPPC11-208ENST00000511955 NUP155O75694 1391 aa6.56□□□□□ -1.36
TRAPPC11-208ENST00000511955 ROCK1Q13464 1354 aa6.56□□□□□ -1.36
TRAPPC11-208ENST00000511955 ZMYM3Q14202 1370 aa6.56□□□□□ -1.36
TRAPPC11-208ENST00000511955 LONRF3Q496Y0 759 aa6.56□□□□□ -1.36
TRAPPC11-208ENST00000511955 ADAMTSL3P82987 1691 aa6.56□□□□□ -1.36
TRAPPC11-208ENST00000511955 KANK1Q14678 1352 aa6.56□□□□□ -1.36
TRAPPC11-208ENST00000511955 ERCC3P19447 782 aa6.56□□□□□ -1.36
TRAPPC11-208ENST00000511955 HSPA2P54652 639 aa6.56□□□□□ -1.36
TRAPPC11-208ENST00000511955 CDCA7Q9BWT1 371 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC11-208ENST00000511955 CCER2I3L3R5 266 aa6.55□□□□□ -1.36
TRAPPC11-208ENST00000511955 RINLQ6ZS11 566 aa6.55□□□□□ -1.36
TRAPPC11-208ENST00000511955 CREB3O43889 395 aa6.55□□□□□ -1.36
TRAPPC11-208ENST00000511955 PPP1R15AO75807 674 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC11-208ENST00000511955 PAX3P23760 479 aa6.55□□□□□ -1.36
TRAPPC11-208ENST00000511955 MCCD1P59942 119 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC11-208ENST00000511955 GPATCH3Q96I76 525 aa6.55□□□□□ -1.36
TRAPPC11-208ENST00000511955 MTA3Q9BTC8 594 aa6.55□□□□□ -1.36
TRAPPC11-208ENST00000511955 PNMA2Q9UL42 364 aa6.55□□□□□ -1.36
TRAPPC11-208ENST00000511955 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.55□□□□□ -1.36
TRAPPC11-208ENST00000511955 HFM1A2PYH4 1435 aa6.55□□□□□ -1.36
TRAPPC11-208ENST00000511955 SH3BP5O60239 455 aa6.54□□□□□ -1.36
TRAPPC11-208ENST00000511955 DDRGK1Q96HY6 314 aa6.54□□□□□ -1.36
TRAPPC11-208ENST00000511955 RPS6KL1Q9Y6S9 549 aa6.54□□□□□ -1.36
TRAPPC11-208ENST00000511955 RAB3GAP2Q9H2M9 1393 aa6.54□□□□□ -1.36
TRAPPC11-208ENST00000511955 KDM5DQ9BY66 1539 aa6.54□□□□□ -1.36
TRAPPC11-208ENST00000511955 RTL5Q5HYW3 569 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC11-208ENST00000511955 ZFYVE27Q5T4F4 411 aa6.54□□□□□ -1.36
TRAPPC11-208ENST00000511955 KRBA2Q6ZNG9 492 aa6.54□□□□□ -1.36
TRAPPC11-208ENST00000511955 UBA5Q9GZZ9 404 aa6.54□□□□□ -1.36
TRAPPC11-208ENST00000511955 MROH1Q8NDA8 1641 aa6.54□□□□□ -1.36
TRAPPC11-208ENST00000511955 CFAP65Q6ZU64 1925 aaKnown RBP6.53□□□□□ -1.36
TRAPPC11-208ENST00000511955 CEP152O94986 1710 aa6.53□□□□□ -1.36
TRAPPC11-208ENST00000511955 ABCC3O15438 1527 aa6.53□□□□□ -1.36
TRAPPC11-208ENST00000511955 EIF2AK4Q9P2K8 1649 aaKnown RBP6.53□□□□□ -1.36
TRAPPC11-208ENST00000511955 TXNDC2Q86VQ3 553 aa6.53□□□□□ -1.36
TRAPPC11-208ENST00000511955 HMGB1P1B2RPK0 211 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC11-208ENST00000511955 KIF4AO95239 1232 aa6.53□□□□□ -1.36
TRAPPC11-208ENST00000511955 PARNO95453 639 aaKnown RBP6.53□□□□□ -1.36
TRAPPC11-208ENST00000511955 C8orf37Q96NL8 207 aa6.53□□□□□ -1.36
TRAPPC11-208ENST00000511955 SETD5Q9C0A6 1442 aa6.53□□□□□ -1.36
TRAPPC11-208ENST00000511955 CNTLNQ9NXG0 1405 aa6.53□□□□□ -1.36
TRAPPC11-208ENST00000511955 C3P01024 1663 aa6.52□□□□□ -1.36
TRAPPC11-208ENST00000511955 CLGNO14967 610 aa6.52□□□□□ -1.37
TRAPPC11-208ENST00000511955 PRDM15P57071 1507 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC11-208ENST00000511955 RNF17Q9BXT8 1623 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-208ENST00000511955 GCC2Q8IWJ2 1684 aa6.52□□□□□ -1.37
TRAPPC11-208ENST00000511955 MYBPC2Q14324 1141 aa6.51□□□□□ -1.37
TRAPPC11-208ENST00000511955 TSHZ1Q6ZSZ6 1077 aa6.51□□□□□ -1.37
TRAPPC11-208ENST00000511955 RBM46Q8TBY0 533 aaKnown RBP6.51□□□□□ -1.37
TRAPPC11-208ENST00000511955 NPATQ14207 1427 aa6.51□□□□□ -1.37
TRAPPC11-208ENST00000511955 CDCA8Q53HL2 280 aa6.51□□□□□ -1.37
TRAPPC11-208ENST00000511955 DPH6Q7L8W6 267 aa6.51□□□□□ -1.37
TRAPPC11-208ENST00000511955 PMM1Q92871 262 aa6.51□□□□□ -1.37
TRAPPC11-208ENST00000511955 SPOCK3Q9BQ16 436 aa6.51□□□□□ -1.37
TRAPPC11-208ENST00000511955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRAPPC11-208ENST00000511955 FAM135AQ9P2D6 1515 aa6.51□□□□□ -1.37
TRAPPC11-208ENST00000511955 DEPDC5O75140 1603 aa6.51□□□□□ -1.37
TRAPPC11-208ENST00000511955 GPIHBP1Q8IV16 184 aa6.5□□□□□ -1.37
TRAPPC11-208ENST00000511955 ZNF622Q969S3 477 aaKnown RBP eCLIP6.5□□□□□ -1.37
TRAPPC11-208ENST00000511955 CAMSAP1Q5T5Y3 1602 aa6.5□□□□□ -1.37
TRAPPC11-208ENST00000511955 TNRQ92752 1358 aa6.5□□□□□ -1.37
TRAPPC11-208ENST00000511955 ZC3H6P61129 1189 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-208ENST00000511955 NAALADL2Q58DX5 795 aa6.5□□□□□ -1.37
TRAPPC11-208ENST00000511955 SMC5Q8IY18 1101 aa6.5□□□□□ -1.37
TRAPPC11-208ENST00000511955 MPHOSPH9Q99550 1183 aa6.5□□□□□ -1.37
TRAPPC11-208ENST00000511955 GABBR1Q9UBS5 961 aa6.5□□□□□ -1.37
TRAPPC11-208ENST00000511955 ZNF330Q9Y3S2 320 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC11-208ENST00000511955 UHRF1BP1Q6BDS2 1440 aa6.5□□□□□ -1.37
TRAPPC11-208ENST00000511955 PZPP20742 1482 aa6.49□□□□□ -1.37
TRAPPC11-208ENST00000511955 CCDC194A0A1B0GVG4 234 aa6.49□□□□□ -1.37
TRAPPC11-208ENST00000511955 NUTM2DQ5VT03 806 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC11-208ENST00000511955 YTHDC1Q96MU7 727 aaKnown RBP6.49□□□□□ -1.37
TRAPPC11-208ENST00000511955 METTL14Q9HCE5 456 aaKnown RBP6.49□□□□□ -1.37
TRAPPC11-208ENST00000511955 UNC13BO14795 1591 aa6.49□□□□□ -1.37
TRAPPC11-208ENST00000511955 UGGT1Q9NYU2 1555 aa6.49□□□□□ -1.37
TRAPPC11-208ENST00000511955 SBNO2Q9Y2G9 1366 aa6.49□□□□□ -1.37
TRAPPC11-208ENST00000511955 ANP32CO43423 234 aa6.49□□□□□ -1.37
TRAPPC11-208ENST00000511955 ZNF16P17020 682 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms