RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 LMTK2Q8IWU2 1503 aa10.44□□□□□ -0.74
COPS4-209ENST00000511653 POTEB2H3BUK9 544 aa10.44□□□□□ -0.74
COPS4-209ENST00000511653 EVI5O60447 810 aa10.43□□□□□ -0.74
COPS4-209ENST00000511653 TXNDC2Q86VQ3 553 aa10.42□□□□□ -0.74
COPS4-209ENST00000511653 PTCD2Q8WV60 388 aaKnown RBP10.42□□□□□ -0.74
COPS4-209ENST00000511653 TMEM2Q9UHN6 1383 aa10.42□□□□□ -0.74
COPS4-209ENST00000511653 ADGRB3O60242 1522 aa10.42□□□□□ -0.74
COPS4-209ENST00000511653 TET3O43151 1660 aa10.41□□□□□ -0.74
COPS4-209ENST00000511653 CHIC2Q9UKJ5 165 aa10.41□□□□□ -0.74
COPS4-209ENST00000511653 NWD1Q149M9 1564 aa10.4□□□□□ -0.74
COPS4-209ENST00000511653 GCC2Q8IWJ2 1684 aa10.4□□□□□ -0.74
COPS4-209ENST00000511653 ROBO1Q9Y6N7 1651 aa10.4□□□□□ -0.74
COPS4-209ENST00000511653 PTGER2P43116 358 aa10.4□□□□□ -0.74
COPS4-209ENST00000511653 KANK1Q14678 1352 aa10.4□□□□□ -0.75
COPS4-209ENST00000511653 NOS1P29475 1434 aa10.39□□□□□ -0.75
COPS4-209ENST00000511653 ADGRL2O95490 1459 aa10.39□□□□□ -0.75
COPS4-209ENST00000511653 TMEM94Q12767 1356 aa10.38□□□□□ -0.75
COPS4-209ENST00000511653 ANKRD30AQ9BXX3 1397 aa10.38□□□□□ -0.75
COPS4-209ENST00000511653 IDI1Q13907 227 aa10.38□□□□□ -0.75
COPS4-209ENST00000511653 NEUROD2Q15784 382 aa10.38□□□□□ -0.75
COPS4-209ENST00000511653 EID1Q9Y6B2 187 aa10.38□□□□□ -0.75
COPS4-209ENST00000511653 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.38□□□□□ -0.75
COPS4-209ENST00000511653 CHD2O14647 1828 aaKnown RBP10.37□□□□□ -0.75
COPS4-209ENST00000511653 FECHP22830 423 aa10.37□□□□□ -0.75
COPS4-209ENST00000511653 RGS17Q9UGC6 210 aaPredicted RBP10.37□□□□□ -0.75
COPS4-209ENST00000511653 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
COPS4-209ENST00000511653 SLC34A2O95436 690 aa10.36□□□□□ -0.75
COPS4-209ENST00000511653 RBM33Q96EV2 1170 aaKnown RBP10.36□□□□□ -0.75
COPS4-209ENST00000511653 SLC26A8Q96RN1 970 aa10.36□□□□□ -0.75
COPS4-209ENST00000511653 NKTRP30414 1462 aaKnown RBP10.36□□□□□ -0.75
COPS4-209ENST00000511653 TMEM131LA2VDJ0 1609 aa10.36□□□□□ -0.75
COPS4-209ENST00000511653 UNC13BO14795 1591 aa10.35□□□□□ -0.75
COPS4-209ENST00000511653 TBC1D12O60347 775 aa10.35□□□□□ -0.75
COPS4-209ENST00000511653 FAM135BQ49AJ0 1406 aa10.35□□□□□ -0.75
COPS4-209ENST00000511653 E9PCH4 1651 aa10.35□□□□□ -0.75
COPS4-209ENST00000511653 ZFYVE9O95405 1425 aa10.35□□□□□ -0.75
COPS4-209ENST00000511653 TMEM132AQ24JP5 1023 aa10.34□□□□□ -0.75
COPS4-209ENST00000511653 KRI1Q8N9T8 703 aaKnown RBP10.34□□□□□ -0.75
COPS4-209ENST00000511653 GPBP1L1Q9HC44 474 aaPredicted RBP10.34□□□□□ -0.75
COPS4-209ENST00000511653 ANO8Q9HCE9 1232 aaPredicted RBP10.34□□□□□ -0.75
COPS4-209ENST00000511653 KCNA6P17658 529 aa10.34□□□□□ -0.75
COPS4-209ENST00000511653 RPRD2Q5VT52 1461 aaKnown RBP10.34□□□□□ -0.75
COPS4-209ENST00000511653 SETD1AO15047 1707 aaKnown RBP10.34□□□□□ -0.75
COPS4-209ENST00000511653 PHLPP1O60346 1717 aa10.34□□□□□ -0.75
COPS4-209ENST00000511653 ANKRD50Q9ULJ7 1429 aa10.33□□□□□ -0.76
COPS4-209ENST00000511653 AK7Q96M32 723 aa10.33□□□□□ -0.76
COPS4-209ENST00000511653 PCDHGA4Q9Y5G9 962 aa10.33□□□□□ -0.76
COPS4-209ENST00000511653 KHSRPQ92945 711 aaKnown RBP eCLIP10.32□□□□□ -0.76
COPS4-209ENST00000511653 CDHR5Q9HBB8 845 aa10.32□□□□□ -0.76
COPS4-209ENST00000511653 TRIM66O15016 1216 aa10.31□□□□□ -0.76
COPS4-209ENST00000511653 PROSER2Q86WR7 435 aaPredicted RBP10.31□□□□□ -0.76
COPS4-209ENST00000511653 RIMS2Q9UQ26 1411 aa10.31□□□□□ -0.76
COPS4-209ENST00000511653 COL16A1Q07092 1604 aaPredicted RBP10.31□□□□□ -0.76
COPS4-209ENST00000511653 IQGAP3Q86VI3 1631 aa10.31□□□□□ -0.76
COPS4-209ENST00000511653 FAM50AQ14320 339 aaKnown RBP10.31□□□□□ -0.76
COPS4-209ENST00000511653 PLEKHG1Q9ULL1 1385 aa10.31□□□□□ -0.76
COPS4-209ENST00000511653 SLC52A1Q9NWF4 448 aa10.3□□□□□ -0.76
COPS4-209ENST00000511653 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.3□□□□□ -0.76
COPS4-209ENST00000511653 POTEAQ6S8J7 498 aa10.29□□□□□ -0.76
COPS4-209ENST00000511653 MSH6P52701 1360 aa10.29□□□□□ -0.76
COPS4-209ENST00000511653 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
COPS4-209ENST00000511653 PCDHGA10Q9Y5H3 936 aa10.28□□□□□ -0.76
COPS4-209ENST00000511653 GTF3C3Q9Y5Q9 886 aa10.28□□□□□ -0.76
COPS4-209ENST00000511653 ADAMTS13Q76LX8 1427 aa10.28□□□□□ -0.76
COPS4-209ENST00000511653 SRCAPQ6ZRS2 3230 aa10.27□□□□□ -0.76
COPS4-209ENST00000511653 DIP2AQ14689 1571 aa10.27□□□□□ -0.77
COPS4-209ENST00000511653 PTGDRQ13258 359 aa10.27□□□□□ -0.77
COPS4-209ENST00000511653 TSR1Q2NL82 804 aaKnown RBP10.27□□□□□ -0.77
COPS4-209ENST00000511653 CCDC102AQ96A19 550 aa10.27□□□□□ -0.77
COPS4-209ENST00000511653 NPDC1Q9NQX5 325 aaPredicted RBP10.27□□□□□ -0.77
COPS4-209ENST00000511653 NRXN3Q9Y4C0 1643 aa10.27□□□□□ -0.77
COPS4-209ENST00000511653 GNPATO15228 680 aa10.26□□□□□ -0.77
COPS4-209ENST00000511653 PPP1R15AO75807 674 aaPredicted RBP10.26□□□□□ -0.77
COPS4-209ENST00000511653 PDE4DQ08499 809 aa10.26□□□□□ -0.77
COPS4-209ENST00000511653 LRP6O75581 1613 aa10.26□□□□□ -0.77
COPS4-209ENST00000511653 SPHKAPQ2M3C7 1700 aa10.26□□□□□ -0.77
COPS4-209ENST00000511653 NUTM2DQ5VT03 806 aaPredicted RBP10.25□□□□□ -0.77
COPS4-209ENST00000511653 SLAIN2Q9P270 581 aa10.25□□□□□ -0.77
COPS4-209ENST00000511653 SHPRHQ149N8 1683 aa10.25□□□□□ -0.77
COPS4-209ENST00000511653 AHDC1Q5TGY3 1603 aaPredicted RBP10.25□□□□□ -0.77
COPS4-209ENST00000511653 EN1Q05925 392 aaPredicted RBP10.25□□□□□ -0.77
COPS4-209ENST00000511653 XRN1Q8IZH2 1706 aaKnown RBP10.25□□□□□ -0.77
COPS4-209ENST00000511653 JCADQ9P266 1359 aa10.24□□□□□ -0.77
COPS4-209ENST00000511653 IRF6O14896 467 aa10.24□□□□□ -0.77
COPS4-209ENST00000511653 FCHSD2O94868 740 aa10.24□□□□□ -0.77
COPS4-209ENST00000511653 PHF14O94880 888 aa10.24□□□□□ -0.77
COPS4-209ENST00000511653 MAP2K5Q13163 448 aa10.24□□□□□ -0.77
COPS4-209ENST00000511653 ARSIQ5FYB1 569 aa10.24□□□□□ -0.77
COPS4-209ENST00000511653 SLAIN1Q8ND83 568 aa10.24□□□□□ -0.77
COPS4-209ENST00000511653 TIMELESSQ9UNS1 1208 aa10.24□□□□□ -0.77
COPS4-209ENST00000511653 PTPRUQ92729 1446 aa10.24□□□□□ -0.77
COPS4-209ENST00000511653 TRPM2O94759 1503 aa10.23□□□□□ -0.77
COPS4-209ENST00000511653 NUDT7P0C024 238 aa10.23□□□□□ -0.77
COPS4-209ENST00000511653 KDM4CQ9H3R0 1056 aa10.23□□□□□ -0.77
COPS4-209ENST00000511653 TBX22Q9Y458 520 aa10.23□□□□□ -0.77
COPS4-209ENST00000511653 ROCK1Q13464 1354 aa10.23□□□□□ -0.77
COPS4-209ENST00000511653 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
COPS4-209ENST00000511653 HIC1Q14526 733 aa10.22□□□□□ -0.77
COPS4-209ENST00000511653 NCOA3Q9Y6Q9 1424 aa10.22□□□□□ -0.77
COPS4-209ENST00000511653 SETBP1Q9Y6X0 1596 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms