RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 CPSF1Q10570 1443 aaKnown RBP14.47□□□□□ -0.09
NR1I3-227ENST00000510951 KTN1Q86UP2 1357 aaKnown RBP14.47□□□□□ -0.09
NR1I3-227ENST00000510951 PNPLA6Q8IY17 1366 aa14.47□□□□□ -0.09
NR1I3-227ENST00000510951 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
NR1I3-227ENST00000510951 LMOD2Q6P5Q4 547 aa14.46□□□□□ -0.09
NR1I3-227ENST00000510951 MARF1Q9Y4F3 1742 aaKnown RBP14.46□□□□□ -0.1
NR1I3-227ENST00000510951 SBNO1A3KN83 1393 aa14.46□□□□□ -0.1
NR1I3-227ENST00000510951 JCADQ9P266 1359 aa14.46□□□□□ -0.1
NR1I3-227ENST00000510951 PHRF1Q9P1Y6 1649 aaKnown RBP14.45□□□□□ -0.1
NR1I3-227ENST00000510951 HDGFL2Q7Z4V5 671 aaPredicted RBP14.45□□□□□ -0.1
NR1I3-227ENST00000510951 LRRC59Q96AG4 307 aaKnown RBP14.45□□□□□ -0.1
NR1I3-227ENST00000510951 ANKRD36BQ8N2N9 1353 aa14.45□□□□□ -0.1
NR1I3-227ENST00000510951 CCDC7Q96M83 1385 aa14.45□□□□□ -0.1
NR1I3-227ENST00000510951 SPATA31A3Q5VYP0 1347 aa14.44□□□□□ -0.1
NR1I3-227ENST00000510951 TERF2IPQ9NYB0 399 aa14.44□□□□□ -0.1
NR1I3-227ENST00000510951 WASHC2AQ641Q2 1341 aa14.43□□□□□ -0.1
NR1I3-227ENST00000510951 MED1Q15648 1581 aaPredicted RBP14.43□□□□□ -0.1
NR1I3-227ENST00000510951 EDC4Q6P2E9 1401 aaKnown RBP14.42□□□□□ -0.1
NR1I3-227ENST00000510951 LRP6O75581 1613 aa14.42□□□□□ -0.1
NR1I3-227ENST00000510951 NUTM2GQ5VZR2 741 aa14.42□□□□□ -0.1
NR1I3-227ENST00000510951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.42□□□□□ -0.1
NR1I3-227ENST00000510951 ARHGEF10O15013 1369 aa14.42□□□□□ -0.1
NR1I3-227ENST00000510951 SSH2Q76I76 1423 aa14.41□□□□□ -0.1
NR1I3-227ENST00000510951 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
NR1I3-227ENST00000510951 USP54Q70EL1 1684 aa14.41□□□□□ -0.1
NR1I3-227ENST00000510951 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
NR1I3-227ENST00000510951 NUTM2BA6NNL0 878 aaPredicted RBP14.4□□□□□ -0.1
NR1I3-227ENST00000510951 NUTM2EB1AL46 878 aaPredicted RBP14.4□□□□□ -0.1
NR1I3-227ENST00000510951 NUTM2AQ8IVF1 878 aaPredicted RBP14.4□□□□□ -0.1
NR1I3-227ENST00000510951 ANKRD26Q9UPS8 1709 aa14.4□□□□□ -0.1
NR1I3-227ENST00000510951 TTC21BQ7Z4L5 1316 aa14.4□□□□□ -0.1
NR1I3-227ENST00000510951 BRD4O60885 1362 aaPredicted RBP14.39□□□□□ -0.11
NR1I3-227ENST00000510951 ABTB2Q8N961 1025 aa14.39□□□□□ -0.11
NR1I3-227ENST00000510951 CABLES1Q8TDN4 633 aa14.39□□□□□ -0.11
NR1I3-227ENST00000510951 ADRA2BP18089 450 aa14.38□□□□□ -0.11
NR1I3-227ENST00000510951 NME9Q86XW9 330 aa14.38□□□□□ -0.11
NR1I3-227ENST00000510951 SPATA31A6Q5VVP1 1343 aa14.38□□□□□ -0.11
NR1I3-227ENST00000510951 TTC21AQ8NDW8 1320 aa14.38□□□□□ -0.11
NR1I3-227ENST00000510951 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
NR1I3-227ENST00000510951 PANK3Q9H999 370 aa14.37□□□□□ -0.11
NR1I3-227ENST00000510951 LTN1O94822 1766 aa14.37□□□□□ -0.11
NR1I3-227ENST00000510951 PLCH1Q4KWH8 1693 aa14.36□□□□□ -0.11
NR1I3-227ENST00000510951 CARD14Q9BXL6 1004 aa14.36□□□□□ -0.11
NR1I3-227ENST00000510951 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
NR1I3-227ENST00000510951 SLIT3O75094 1523 aa14.36□□□□□ -0.11
NR1I3-227ENST00000510951 ADAMTS2O95450 1211 aa14.35□□□□□ -0.11
NR1I3-227ENST00000510951 NLRP6P59044 892 aa14.35□□□□□ -0.11
NR1I3-227ENST00000510951 OVOS2A0A0J9YW53 1432 aa14.34□□□□□ -0.11
NR1I3-227ENST00000510951 OVOS2Q6IE36 1432 aa14.34□□□□□ -0.11
NR1I3-227ENST00000510951 MEX3CQ5U5Q3 659 aaKnown RBP14.34□□□□□ -0.11
NR1I3-227ENST00000510951 USP19O94966 1318 aa14.34□□□□□ -0.11
NR1I3-227ENST00000510951 SOX12O15370 315 aa14.33□□□□□ -0.12
NR1I3-227ENST00000510951 NLRP13Q86W25 1043 aa14.33□□□□□ -0.12
NR1I3-227ENST00000510951 RGPD5Q99666 1765 aa14.32□□□□□ -0.12
NR1I3-227ENST00000510951 NFAT5O94916 1531 aa14.32□□□□□ -0.12
NR1I3-227ENST00000510951 GGNBP2Q9H3C7 697 aa14.32□□□□□ -0.12
NR1I3-227ENST00000510951 CGNL1Q0VF96 1302 aa14.31□□□□□ -0.12
NR1I3-227ENST00000510951 COL14A1Q05707 1796 aaKnown RBP14.31□□□□□ -0.12
NR1I3-227ENST00000510951 USP31Q70CQ4 1352 aa14.31□□□□□ -0.12
NR1I3-227ENST00000510951 C8orf37Q96NL8 207 aa14.3□□□□□ -0.12
NR1I3-227ENST00000510951 NRAPQ86VF7 1730 aa14.29□□□□□ -0.12
NR1I3-227ENST00000510951 NWD2Q9ULI1 1742 aa14.29□□□□□ -0.12
NR1I3-227ENST00000510951 MAP2P11137 1827 aaKnown RBP14.29□□□□□ -0.12
NR1I3-227ENST00000510951 ZBTB7CA1YPR0 619 aa14.29□□□□□ -0.12
NR1I3-227ENST00000510951 FYB1O15117 783 aa14.29□□□□□ -0.12
NR1I3-227ENST00000510951 COG3Q96JB2 828 aa14.29□□□□□ -0.12
NR1I3-227ENST00000510951 KNSTRNQ9Y448 316 aa14.29□□□□□ -0.12
NR1I3-227ENST00000510951 KIAA0232Q92628 1395 aa14.29□□□□□ -0.12
NR1I3-227ENST00000510951 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
NR1I3-227ENST00000510951 GCP02774 474 aa14.28□□□□□ -0.12
NR1I3-227ENST00000510951 ZC3H6P61129 1189 aaKnown RBP14.28□□□□□ -0.12
NR1I3-227ENST00000510951 CNGB1Q14028 1251 aaPredicted RBP14.28□□□□□ -0.12
NR1I3-227ENST00000510951 COL18A1P39060 1754 aa14.27□□□□□ -0.12
NR1I3-227ENST00000510951 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.27□□□□□ -0.12
NR1I3-227ENST00000510951 LMO7Q8WWI1 1683 aa14.27□□□□□ -0.12
NR1I3-227ENST00000510951 CHRNA2Q15822 529 aa14.27□□□□□ -0.13
NR1I3-227ENST00000510951 PRDM11Q9NQV5 511 aa14.27□□□□□ -0.13
NR1I3-227ENST00000510951 NSD2O96028 1365 aa14.26□□□□□ -0.13
NR1I3-227ENST00000510951 DDX10Q13206 875 aaKnown RBP14.26□□□□□ -0.13
NR1I3-227ENST00000510951 AFF2P51816 1311 aa14.25□□□□□ -0.13
NR1I3-227ENST00000510951 PEAK1Q9H792 1746 aa14.25□□□□□ -0.13
NR1I3-227ENST00000510951 KCNH5Q8NCM2 988 aa14.25□□□□□ -0.13
NR1I3-227ENST00000510951 NGLY1Q96IV0 654 aa14.25□□□□□ -0.13
NR1I3-227ENST00000510951 CPDO75976 1380 aa14.24□□□□□ -0.13
NR1I3-227ENST00000510951 PER1O15534 1290 aaPredicted RBP14.24□□□□□ -0.13
NR1I3-227ENST00000510951 FBLN1P23142 703 aa14.24□□□□□ -0.13
NR1I3-227ENST00000510951 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
NR1I3-227ENST00000510951 CC2D1BQ5T0F9 858 aaKnown RBP14.24□□□□□ -0.13
NR1I3-227ENST00000510951 FAM83GA6ND36 823 aa14.23□□□□□ -0.13
NR1I3-227ENST00000510951 TNNT2P45379 298 aaPredicted RBP14.23□□□□□ -0.13
NR1I3-227ENST00000510951 SLIT2O94813 1529 aa14.23□□□□□ -0.13
NR1I3-227ENST00000510951 CAMTA1Q9Y6Y1 1673 aa14.22□□□□□ -0.13
NR1I3-227ENST00000510951 RGPD2P0DJD1 1756 aa14.22□□□□□ -0.13
NR1I3-227ENST00000510951 ABCC6O95255 1503 aa14.21□□□□□ -0.13
NR1I3-227ENST00000510951 RRS1Q15050 365 aaKnown RBP14.21□□□□□ -0.13
NR1I3-227ENST00000510951 MORC1Q86VD1 984 aa14.21□□□□□ -0.13
NR1I3-227ENST00000510951 MAP3K19Q56UN5 1328 aa14.2□□□□□ -0.14
NR1I3-227ENST00000510951 BCL9LQ86UU0 1499 aa14.2□□□□□ -0.14
NR1I3-227ENST00000510951 ARHGEF25Q86VW2 580 aa14.2□□□□□ -0.14
NR1I3-227ENST00000510951 BTG4Q9NY30 223 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms