RNA–Protein interactions for RNA: ENST00000510491.5

COPB2-207, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-207ENST00000510491 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
COPB2-207ENST00000510491 FBLN1P23142 703 aa13.1□□□□□ -0.31
COPB2-207ENST00000510491 TNNT2P45379 298 aaPredicted RBP13.1□□□□□ -0.31
COPB2-207ENST00000510491 MTHFSP49914 203 aa13.1□□□□□ -0.31
COPB2-207ENST00000510491 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
COPB2-207ENST00000510491 ZNF335Q9H4Z2 1342 aaPredicted RBP13.1□□□□□ -0.31
COPB2-207ENST00000510491 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
COPB2-207ENST00000510491 RGPD8O14715 1765 aaPredicted RBP13.09□□□□□ -0.31
COPB2-207ENST00000510491 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
COPB2-207ENST00000510491 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
COPB2-207ENST00000510491 OVOS2A0A0J9YW53 1432 aa13.09□□□□□ -0.31
COPB2-207ENST00000510491 BLMP54132 1417 aaPredicted RBP13.09□□□□□ -0.31
COPB2-207ENST00000510491 HNRNPUQ00839 825 aaKnown RBP eCLIP13.09□□□□□ -0.31
COPB2-207ENST00000510491 OVOS2Q6IE36 1432 aa13.09□□□□□ -0.31
COPB2-207ENST00000510491 ANKRD26Q9UPS8 1709 aa13.09□□□□□ -0.31
COPB2-207ENST00000510491 C1orf167Q5SNV9 1468 aa13.09□□□□□ -0.31
COPB2-207ENST00000510491 USP31Q70CQ4 1352 aa13.08□□□□□ -0.31
COPB2-207ENST00000510491 MST1RQ04912 1400 aa13.08□□□□□ -0.32
COPB2-207ENST00000510491 ORAI2Q96SN7 254 aa13.08□□□□□ -0.32
COPB2-207ENST00000510491 POLKQ9UBT6 870 aa13.08□□□□□ -0.32
COPB2-207ENST00000510491 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
COPB2-207ENST00000510491 DCCP43146 1447 aa13.07□□□□□ -0.32
COPB2-207ENST00000510491 NGDNQ8NEJ9 315 aaKnown RBP13.07□□□□□ -0.32
COPB2-207ENST00000510491 ITSN1Q15811 1721 aa13.07□□□□□ -0.32
COPB2-207ENST00000510491 TTC21AQ8NDW8 1320 aa13.07□□□□□ -0.32
COPB2-207ENST00000510491 KIF20BQ96Q89 1820 aa13.06□□□□□ -0.32
COPB2-207ENST00000510491 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
COPB2-207ENST00000510491 ZBED9Q6R2W3 1325 aa13.06□□□□□ -0.32
COPB2-207ENST00000510491 SHPRHQ149N8 1683 aa13.05□□□□□ -0.32
COPB2-207ENST00000510491 XIRP1Q702N8 1843 aaKnown RBP13.05□□□□□ -0.32
COPB2-207ENST00000510491 ESCO1Q5FWF5 840 aa13.05□□□□□ -0.32
COPB2-207ENST00000510491 C14orf37Q86TY3 774 aa13.04□□□□□ -0.32
COPB2-207ENST00000510491 COG3Q96JB2 828 aa13.04□□□□□ -0.32
COPB2-207ENST00000510491 DMRT2Q9Y5R5 561 aa13.03□□□□□ -0.32
COPB2-207ENST00000510491 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
COPB2-207ENST00000510491 PIK3C2AO00443 1686 aa13.02□□□□□ -0.32
COPB2-207ENST00000510491 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.33
COPB2-207ENST00000510491 USP54Q70EL1 1684 aa13.01□□□□□ -0.33
COPB2-207ENST00000510491 MARF1Q9Y4F3 1742 aaKnown RBP13.01□□□□□ -0.33
COPB2-207ENST00000510491 FOXO3O43524 673 aa13□□□□□ -0.33
COPB2-207ENST00000510491 ATF3P18847 181 aa13□□□□□ -0.33
COPB2-207ENST00000510491 RRS1Q15050 365 aaKnown RBP13□□□□□ -0.33
COPB2-207ENST00000510491 WDR43Q15061 677 aaKnown RBP eCLIP13□□□□□ -0.33
COPB2-207ENST00000510491 CADPS2Q86UW7 1296 aa13□□□□□ -0.33
COPB2-207ENST00000510491 MSH6P52701 1360 aa12.99□□□□□ -0.33
COPB2-207ENST00000510491 ZNF521Q96K83 1311 aa12.99□□□□□ -0.33
COPB2-207ENST00000510491 IL13P35225 146 aa12.99□□□□□ -0.33
COPB2-207ENST00000510491 CFAP53Q96M91 514 aa12.99□□□□□ -0.33
COPB2-207ENST00000510491 LTBP4Q8N2S1 1624 aa12.99□□□□□ -0.33
COPB2-207ENST00000510491 CDK12Q9NYV4 1490 aaPredicted RBP12.98□□□□□ -0.33
COPB2-207ENST00000510491 KRT28Q7Z3Y7 464 aa12.98□□□□□ -0.33
COPB2-207ENST00000510491 PLEKHF1Q96S99 279 aa12.98□□□□□ -0.33
COPB2-207ENST00000510491 TRPM3Q9HCF6 1732 aaPredicted RBP12.98□□□□□ -0.33
COPB2-207ENST00000510491 PEAK1Q9H792 1746 aa12.97□□□□□ -0.33
COPB2-207ENST00000510491 NLRP6P59044 892 aa12.97□□□□□ -0.33
COPB2-207ENST00000510491 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
COPB2-207ENST00000510491 PSME1Q06323 249 aa12.97□□□□□ -0.33
COPB2-207ENST00000510491 CCDC146Q8IYE0 955 aa12.97□□□□□ -0.33
COPB2-207ENST00000510491 DDX17Q92841 729 aaKnown RBP12.97□□□□□ -0.33
COPB2-207ENST00000510491 KIF1AQ12756 1690 aa12.96□□□□□ -0.33
COPB2-207ENST00000510491 MAP3K19Q56UN5 1328 aa12.96□□□□□ -0.33
COPB2-207ENST00000510491 DIAPH1O60610 1272 aaKnown RBP12.96□□□□□ -0.33
COPB2-207ENST00000510491 NUTM2GQ5VZR2 741 aa12.96□□□□□ -0.33
COPB2-207ENST00000510491 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
COPB2-207ENST00000510491 ABTB2Q8N961 1025 aa12.96□□□□□ -0.33
COPB2-207ENST00000510491 IQSEC2Q5JU85 1478 aa12.96□□□□□ -0.34
COPB2-207ENST00000510491 USP19O94966 1318 aa12.95□□□□□ -0.34
COPB2-207ENST00000510491 APAF1O14727 1248 aa12.95□□□□□ -0.34
COPB2-207ENST00000510491 SLAIN2Q9P270 581 aa12.95□□□□□ -0.34
COPB2-207ENST00000510491 PXDNQ92626 1479 aa12.95□□□□□ -0.34
COPB2-207ENST00000510491 NFAT5O94916 1531 aa12.94□□□□□ -0.34
COPB2-207ENST00000510491 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
COPB2-207ENST00000510491 HSP90AB2PQ58FF8 381 aa12.94□□□□□ -0.34
COPB2-207ENST00000510491 RUNDC1Q96C34 613 aa12.94□□□□□ -0.34
COPB2-207ENST00000510491 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
COPB2-207ENST00000510491 SLIT3O75094 1523 aa12.93□□□□□ -0.34
COPB2-207ENST00000510491 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
COPB2-207ENST00000510491 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
COPB2-207ENST00000510491 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.34
COPB2-207ENST00000510491 EIF4A2Q14240 407 aaKnown RBP12.93□□□□□ -0.34
COPB2-207ENST00000510491 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
COPB2-207ENST00000510491 MAP2P11137 1827 aaKnown RBP12.92□□□□□ -0.34
COPB2-207ENST00000510491 CDCA7LQ96GN5 454 aa12.92□□□□□ -0.34
COPB2-207ENST00000510491 NUDCQ9Y266 331 aa12.92□□□□□ -0.34
COPB2-207ENST00000510491 SALL2Q9Y467 1007 aaPredicted RBP12.92□□□□□ -0.34
COPB2-207ENST00000510491 ALS2Q96Q42 1657 aa12.92□□□□□ -0.34
COPB2-207ENST00000510491 SOS2Q07890 1332 aaPredicted RBP12.91□□□□□ -0.34
COPB2-207ENST00000510491 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
COPB2-207ENST00000510491 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
COPB2-207ENST00000510491 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
COPB2-207ENST00000510491 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
COPB2-207ENST00000510491 SPATA31A3Q5VYP0 1347 aa12.9□□□□□ -0.34
COPB2-207ENST00000510491 NPHP3Q7Z494 1330 aa12.9□□□□□ -0.34
COPB2-207ENST00000510491 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.34
COPB2-207ENST00000510491 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
COPB2-207ENST00000510491 SOX12O15370 315 aa12.9□□□□□ -0.34
COPB2-207ENST00000510491 FCHSD2O94868 740 aa12.9□□□□□ -0.34
COPB2-207ENST00000510491 HOXC9P31274 260 aa12.9□□□□□ -0.34
COPB2-207ENST00000510491 FLT4P35916 1363 aa12.9□□□□□ -0.34
COPB2-207ENST00000510491 GCP02774 474 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms