RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 SKIV2LQ15477 1246 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-226ENST00000508635 RNF19BQ6ZMZ0 732 aa6.68□□□□□ -1.34
UBE2D3-226ENST00000508635 NXF1Q9UBU9 619 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-226ENST00000508635 C6orf229H3BNL8 230 aa6.67□□□□□ -1.34
UBE2D3-226ENST00000508635 CABLES1Q8TDN4 633 aa6.67□□□□□ -1.34
UBE2D3-226ENST00000508635 THAP11Q96EK4 314 aa6.67□□□□□ -1.34
UBE2D3-226ENST00000508635 TTC24A2A3L6 582 aaPredicted RBP6.66□□□□□ -1.34
UBE2D3-226ENST00000508635 FMNL1O95466 1100 aaPredicted RBP6.66□□□□□ -1.34
UBE2D3-226ENST00000508635 QPCTQ16769 361 aa6.66□□□□□ -1.34
UBE2D3-226ENST00000508635 Q3C1V9 767 aa6.66□□□□□ -1.34
UBE2D3-226ENST00000508635 BRICD5Q6PL45 260 aa6.66□□□□□ -1.34
UBE2D3-226ENST00000508635 KCTD17Q8N5Z5 321 aa6.66□□□□□ -1.34
UBE2D3-226ENST00000508635 PCMTD1Q96MG8 357 aaPredicted RBP6.66□□□□□ -1.34
UBE2D3-226ENST00000508635 NUTM2BA6NNL0 878 aaPredicted RBP6.65□□□□□ -1.34
UBE2D3-226ENST00000508635 NUTM2EB1AL46 878 aaPredicted RBP6.65□□□□□ -1.34
UBE2D3-226ENST00000508635 NUTM2DQ5VT03 806 aaPredicted RBP6.65□□□□□ -1.34
UBE2D3-226ENST00000508635 NUTM2AQ8IVF1 878 aaPredicted RBP6.65□□□□□ -1.34
UBE2D3-226ENST00000508635 SPSB2Q99619 263 aa6.65□□□□□ -1.34
UBE2D3-226ENST00000508635 HRCP23327 699 aa6.64□□□□□ -1.35
UBE2D3-226ENST00000508635 MTMR2Q13614 643 aa6.64□□□□□ -1.35
UBE2D3-226ENST00000508635 TMEM132AQ24JP5 1023 aa6.64□□□□□ -1.35
UBE2D3-226ENST00000508635 FBXO31Q5XUX0 539 aaPredicted RBP6.64□□□□□ -1.35
UBE2D3-226ENST00000508635 FAM160A2Q8N612 972 aaPredicted RBP6.64□□□□□ -1.35
UBE2D3-226ENST00000508635 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.63□□□□□ -1.35
UBE2D3-226ENST00000508635 GJA5P36382 358 aa6.63□□□□□ -1.35
UBE2D3-226ENST00000508635 NCAPD3P42695 1498 aa6.63□□□□□ -1.35
UBE2D3-226ENST00000508635 RTL5Q5HYW3 569 aaPredicted RBP6.63□□□□□ -1.35
UBE2D3-226ENST00000508635 USB1Q9BQ65 265 aaKnown RBP6.63□□□□□ -1.35
UBE2D3-226ENST00000508635 ZBTB3Q9H5J0 574 aa6.63□□□□□ -1.35
UBE2D3-226ENST00000508635 GOPCQ9HD26 462 aa6.63□□□□□ -1.35
UBE2D3-226ENST00000508635 SALL2Q9Y467 1007 aaPredicted RBP6.63□□□□□ -1.35
UBE2D3-226ENST00000508635 LILRB3O75022 631 aa6.62□□□□□ -1.35
UBE2D3-226ENST00000508635 TMEM151AQ8N4L1 468 aa6.62□□□□□ -1.35
UBE2D3-226ENST00000508635 TSC1Q92574 1164 aa6.62□□□□□ -1.35
UBE2D3-226ENST00000508635 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.62□□□□□ -1.35
UBE2D3-226ENST00000508635 PRDM9Q9NQV7 894 aa6.62□□□□□ -1.35
UBE2D3-226ENST00000508635 ATAD2BQ9ULI0 1458 aa6.61□□□□□ -1.35
UBE2D3-226ENST00000508635 TUSC1Q2TAM9 212 aa6.61□□□□□ -1.35
UBE2D3-226ENST00000508635 PRPF38BQ5VTL8 546 aaKnown RBP6.61□□□□□ -1.35
UBE2D3-226ENST00000508635 RETREG3Q86VR2 466 aa6.61□□□□□ -1.35
UBE2D3-226ENST00000508635 SNIP1Q8TAD8 396 aaKnown RBP6.61□□□□□ -1.35
UBE2D3-226ENST00000508635 PRR7Q8TB68 274 aa6.61□□□□□ -1.35
UBE2D3-226ENST00000508635 CFAP99D6REC4 459 aa6.6□□□□□ -1.35
UBE2D3-226ENST00000508635 KRTAP9-2Q9BYQ4 174 aa6.6□□□□□ -1.35
UBE2D3-226ENST00000508635 SMARCA4P51532 1647 aa6.6□□□□□ -1.35
UBE2D3-226ENST00000508635 SPDYE5A6NIY4 337 aa6.59□□□□□ -1.35
UBE2D3-226ENST00000508635 H3BM21 787 aa6.59□□□□□ -1.35
UBE2D3-226ENST00000508635 SMPD1P17405 629 aa6.59□□□□□ -1.35
UBE2D3-226ENST00000508635 BAZ1AQ9NRL2 1556 aaPredicted RBP6.59□□□□□ -1.35
UBE2D3-226ENST00000508635 SMARCA2P51531 1590 aa6.58□□□□□ -1.36
UBE2D3-226ENST00000508635 RNF225M0QZC1 329 aaPredicted RBP6.58□□□□□ -1.36
UBE2D3-226ENST00000508635 AP1G2O75843 785 aa6.58□□□□□ -1.36
UBE2D3-226ENST00000508635 MSS51Q4VC12 460 aa6.58□□□□□ -1.36
UBE2D3-226ENST00000508635 XP32Q5T750 250 aa6.58□□□□□ -1.36
UBE2D3-226ENST00000508635 HMGXB3Q12766 1538 aa6.57□□□□□ -1.36
UBE2D3-226ENST00000508635 KRTAP9-6A0A140TA67 174 aa6.57□□□□□ -1.36
UBE2D3-226ENST00000508635 GDF11O95390 407 aa6.57□□□□□ -1.36
UBE2D3-226ENST00000508635 IGHA1P01876 353 aa6.57□□□□□ -1.36
UBE2D3-226ENST00000508635 JUNDP17535 347 aa6.57□□□□□ -1.36
UBE2D3-226ENST00000508635 RFC5P40937 340 aa6.57□□□□□ -1.36
UBE2D3-226ENST00000508635 PPP2R2DQ66LE6 453 aa6.57□□□□□ -1.36
UBE2D3-226ENST00000508635 KRTAP1-3Q8IUG1 177 aa6.57□□□□□ -1.36
UBE2D3-226ENST00000508635 WNT7AO00755 349 aa6.56□□□□□ -1.36
UBE2D3-226ENST00000508635 GSK3AP49840 483 aa6.56□□□□□ -1.36
UBE2D3-226ENST00000508635 CCDC24Q8N4L8 307 aa6.56□□□□□ -1.36
UBE2D3-226ENST00000508635 DXOO77932 396 aaKnown RBP6.55□□□□□ -1.36
UBE2D3-226ENST00000508635 CTDSPL2Q05D32 466 aa6.55□□□□□ -1.36
UBE2D3-226ENST00000508635 HELBQ8NG08 1087 aaPredicted RBP6.55□□□□□ -1.36
UBE2D3-226ENST00000508635 FCF1Q9Y324 198 aaKnown RBP6.55□□□□□ -1.36
UBE2D3-226ENST00000508635 MROH2BQ7Z745 1585 aa6.55□□□□□ -1.36
UBE2D3-226ENST00000508635 PEG3Q9GZU2 1588 aa6.55□□□□□ -1.36
UBE2D3-226ENST00000508635 BAZ1BQ9UIG0 1483 aaKnown RBP6.54□□□□□ -1.36
UBE2D3-226ENST00000508635 PER1O15534 1290 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-226ENST00000508635 ZBTB24O43167 697 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-226ENST00000508635 MMP16P51512 607 aa6.54□□□□□ -1.36
UBE2D3-226ENST00000508635 RASSF7Q02833 373 aa6.54□□□□□ -1.36
UBE2D3-226ENST00000508635 LRRN4Q8WUT4 740 aa6.53□□□□□ -1.36
UBE2D3-226ENST00000508635 NUDT12Q9BQG2 462 aa6.53□□□□□ -1.36
UBE2D3-226ENST00000508635 CTHP32929 405 aa6.52□□□□□ -1.37
UBE2D3-226ENST00000508635 TMEM259Q4ZIN3 620 aa6.52□□□□□ -1.37
UBE2D3-226ENST00000508635 DESI1Q6ICB0 168 aa6.52□□□□□ -1.37
UBE2D3-226ENST00000508635 LYPD8Q6UX82 237 aa6.52□□□□□ -1.37
UBE2D3-226ENST00000508635 ERBB4Q15303 1308 aa6.51□□□□□ -1.37
UBE2D3-226ENST00000508635 USP17L8P0C7I0 530 aa6.51□□□□□ -1.37
UBE2D3-226ENST00000508635 PTPRNQ16849 979 aa6.51□□□□□ -1.37
UBE2D3-226ENST00000508635 MAP10Q9P2G4 905 aa6.51□□□□□ -1.37
UBE2D3-226ENST00000508635 CCNYL3P0C7X3 344 aa6.5□□□□□ -1.37
UBE2D3-226ENST00000508635 PTCRAQ6ISU1 281 aaPredicted RBP6.5□□□□□ -1.37
UBE2D3-226ENST00000508635 SNRKQ9NRH2 765 aa6.5□□□□□ -1.37
UBE2D3-226ENST00000508635 NESP48681 1621 aa6.5□□□□□ -1.37
UBE2D3-226ENST00000508635 ERCC6Q03468 1493 aa6.49□□□□□ -1.37
UBE2D3-226ENST00000508635 VSIG8P0DPA2 414 aa6.49□□□□□ -1.37
UBE2D3-226ENST00000508635 FOXK2Q01167 660 aa6.49□□□□□ -1.37
UBE2D3-226ENST00000508635 HMX1Q9NP08 348 aaPredicted RBP6.49□□□□□ -1.37
UBE2D3-226ENST00000508635 EVA1BQ9NVM1 165 aa6.49□□□□□ -1.37
UBE2D3-226ENST00000508635 J3QL48 77 aa6.48□□□□□ -1.37
UBE2D3-226ENST00000508635 KCNH2Q12809 1159 aa6.48□□□□□ -1.37
UBE2D3-226ENST00000508635 NR6A1Q15406 480 aa6.48□□□□□ -1.37
UBE2D3-226ENST00000508635 EPS8L1Q8TE68 723 aa6.48□□□□□ -1.37
UBE2D3-226ENST00000508635 HPS1Q92902 700 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms