RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 FBXO41Q8TF61 875 aa9.19□□□□□ -0.94
ATXN3-210ENST00000507965 ATP1B4Q9UN42 357 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-210ENST00000507965 CLIP1P30622 1438 aa9.19□□□□□ -0.94
ATXN3-210ENST00000507965 SAMD9LQ8IVG5 1584 aa9.19□□□□□ -0.94
ATXN3-210ENST00000507965 NPDC1Q9NQX5 325 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-210ENST00000507965 PCDHB3Q9Y5E6 796 aa9.18□□□□□ -0.94
ATXN3-210ENST00000507965 SUPT6HQ7KZ85 1726 aaKnown RBP9.17□□□□□ -0.94
ATXN3-210ENST00000507965 CCDC18Q5T9S5 1454 aa9.17□□□□□ -0.94
ATXN3-210ENST00000507965 SYCP2Q9BX26 1530 aa9.16□□□□□ -0.94
ATXN3-210ENST00000507965 CFAP44Q96MT7 982 aa9.16□□□□□ -0.94
ATXN3-210ENST00000507965 MROH2AA6NES4 1674 aa9.16□□□□□ -0.94
ATXN3-210ENST00000507965 INO80Q9ULG1 1556 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-210ENST00000507965 FYCO1Q9BQS8 1478 aa9.15□□□□□ -0.94
ATXN3-210ENST00000507965 CASKIN1Q8WXD9 1431 aa9.15□□□□□ -0.94
ATXN3-210ENST00000507965 TRAPPC8Q9Y2L5 1435 aa9.15□□□□□ -0.94
ATXN3-210ENST00000507965 SLC19A1P41440 591 aa9.15□□□□□ -0.94
ATXN3-210ENST00000507965 EYA1Q99502 592 aa9.15□□□□□ -0.94
ATXN3-210ENST00000507965 CLTCQ00610 1675 aaKnown RBP9.15□□□□□ -0.94
ATXN3-210ENST00000507965 MLH3Q9UHC1 1453 aa9.15□□□□□ -0.95
ATXN3-210ENST00000507965 EFCAB2Q5VUJ9 269 aa9.14□□□□□ -0.95
ATXN3-210ENST00000507965 PAXIP1Q6ZW49 1069 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-210ENST00000507965 AFAP1Q8N556 730 aa9.14□□□□□ -0.95
ATXN3-210ENST00000507965 AGLP35573 1532 aa9.14□□□□□ -0.95
ATXN3-210ENST00000507965 RNF223E7ERA6 249 aa9.13□□□□□ -0.95
ATXN3-210ENST00000507965 CEBPAP49715 358 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-210ENST00000507965 BLOC1S3Q6QNY0 202 aa9.13□□□□□ -0.95
ATXN3-210ENST00000507965 ZNF775Q96BV0 537 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-210ENST00000507965 MYO3AQ8NEV4 1616 aa9.13□□□□□ -0.95
ATXN3-210ENST00000507965 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
ATXN3-210ENST00000507965 PKDCCQ504Y2 493 aa9.12□□□□□ -0.95
ATXN3-210ENST00000507965 CDK11AQ9UQ88 783 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-210ENST00000507965 ZNF142P52746 1687 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-210ENST00000507965 ADGBQ8N7X0 1667 aa9.12□□□□□ -0.95
ATXN3-210ENST00000507965 UHRF1BP1Q6BDS2 1440 aa9.12□□□□□ -0.95
ATXN3-210ENST00000507965 ATP7AQ04656 1500 aa9.11□□□□□ -0.95
ATXN3-210ENST00000507965 TIAM1Q13009 1591 aa9.11□□□□□ -0.95
ATXN3-210ENST00000507965 DNAJB2P25686 324 aa9.1□□□□□ -0.95
ATXN3-210ENST00000507965 TRIM67Q6ZTA4 783 aa9.1□□□□□ -0.95
ATXN3-210ENST00000507965 SETD1BQ9UPS6 1966 aaKnown RBP9.1□□□□□ -0.95
ATXN3-210ENST00000507965 DGAT1O75907 488 aa9.09□□□□□ -0.95
ATXN3-210ENST00000507965 KMT5BQ4FZB7 885 aa9.09□□□□□ -0.95
ATXN3-210ENST00000507965 SPRYD7Q5W111 196 aa9.09□□□□□ -0.95
ATXN3-210ENST00000507965 GPATCH8Q9UKJ3 1502 aaKnown RBP9.09□□□□□ -0.95
ATXN3-210ENST00000507965 TLL1O43897 1013 aa9.08□□□□□ -0.96
ATXN3-210ENST00000507965 ZNF598Q86UK7 904 aaKnown RBP9.08□□□□□ -0.96
ATXN3-210ENST00000507965 ANKLE1Q8NAG6 615 aa9.08□□□□□ -0.96
ATXN3-210ENST00000507965 RBM46Q8TBY0 533 aaKnown RBP9.08□□□□□ -0.96
ATXN3-210ENST00000507965 CAMSAP1Q5T5Y3 1602 aa9.08□□□□□ -0.96
ATXN3-210ENST00000507965 LTBP4Q8N2S1 1624 aa9.07□□□□□ -0.96
ATXN3-210ENST00000507965 EHBP1L1Q8N3D4 1523 aa9.06□□□□□ -0.96
ATXN3-210ENST00000507965 POLR1AO95602 1720 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-210ENST00000507965 PPEF1O14829 653 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-210ENST00000507965 S1PR4O95977 384 aa9.06□□□□□ -0.96
ATXN3-210ENST00000507965 PRR20EP86478 221 aa9.06□□□□□ -0.96
ATXN3-210ENST00000507965 PRR20CP86479 221 aa9.06□□□□□ -0.96
ATXN3-210ENST00000507965 PRR20DP86480 221 aa9.06□□□□□ -0.96
ATXN3-210ENST00000507965 PRR20BP86481 221 aa9.06□□□□□ -0.96
ATXN3-210ENST00000507965 PRR20AP86496 221 aa9.06□□□□□ -0.96
ATXN3-210ENST00000507965 MYT1Q01538 1121 aa9.06□□□□□ -0.96
ATXN3-210ENST00000507965 EMID1Q96A84 441 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-210ENST00000507965 CEP170BQ9Y4F5 1589 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-210ENST00000507965 NCOA1Q15788 1441 aa9.05□□□□□ -0.96
ATXN3-210ENST00000507965 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
ATXN3-210ENST00000507965 ZNF697Q5TEC3 545 aa9.05□□□□□ -0.96
ATXN3-210ENST00000507965 TMEM134Q9H6X4 195 aa9.05□□□□□ -0.96
ATXN3-210ENST00000507965 CNTLNQ9NXG0 1405 aa9.05□□□□□ -0.96
ATXN3-210ENST00000507965 SPATA31D1Q6ZQQ2 1576 aa9.04□□□□□ -0.96
ATXN3-210ENST00000507965 CFHP08603 1231 aa9.04□□□□□ -0.96
ATXN3-210ENST00000507965 MLLT3P42568 568 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-210ENST00000507965 PTGDRQ13258 359 aa9.04□□□□□ -0.96
ATXN3-210ENST00000507965 ZNF777Q9ULD5 760 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-210ENST00000507965 PTPRTO14522 1441 aa9.04□□□□□ -0.96
ATXN3-210ENST00000507965 A2MP01023 1474 aa9.03□□□□□ -0.96
ATXN3-210ENST00000507965 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
ATXN3-210ENST00000507965 LIAT1Q6ZQX7 453 aa9.03□□□□□ -0.96
ATXN3-210ENST00000507965 ADGRG1Q9Y653 693 aa9.03□□□□□ -0.96
ATXN3-210ENST00000507965 PLEKHH2Q8IVE3 1493 aa9.02□□□□□ -0.96
ATXN3-210ENST00000507965 RCCD1A6NED2 376 aa9.02□□□□□ -0.97
ATXN3-210ENST00000507965 ADH1BP00325 375 aa9.02□□□□□ -0.97
ATXN3-210ENST00000507965 HNRNPMP52272 730 aaKnown RBP eCLIP9.02□□□□□ -0.97
ATXN3-210ENST00000507965 NPATQ14207 1427 aa9.02□□□□□ -0.97
ATXN3-210ENST00000507965 CCNB3Q8WWL7 1395 aa9.01□□□□□ -0.97
ATXN3-210ENST00000507965 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
ATXN3-210ENST00000507965 NR1I2O75469 434 aa9.01□□□□□ -0.97
ATXN3-210ENST00000507965 ARHGEF1Q92888 912 aaKnown RBP9.01□□□□□ -0.97
ATXN3-210ENST00000507965 KIAA1107Q9UPP5 1409 aa9.01□□□□□ -0.97
ATXN3-210ENST00000507965 DNMT1P26358 1616 aaKnown RBP9.01□□□□□ -0.97
ATXN3-210ENST00000507965 SPAG9O60271 1321 aaKnown RBP9.01□□□□□ -0.97
ATXN3-210ENST00000507965 MTUS2Q5JR59 1369 aa9□□□□□ -0.97
ATXN3-210ENST00000507965 ESF1Q9H501 851 aaKnown RBP9□□□□□ -0.97
ATXN3-210ENST00000507965 CAMSAP2Q08AD1 1489 aa9□□□□□ -0.97
ATXN3-210ENST00000507965 MBD5Q9P267 1494 aa9□□□□□ -0.97
ATXN3-210ENST00000507965 NEURL4Q96JN8 1562 aa8.99□□□□□ -0.97
ATXN3-210ENST00000507965 PTPRKQ15262 1439 aa8.99□□□□□ -0.97
ATXN3-210ENST00000507965 NUTM2FA1L443 756 aa8.99□□□□□ -0.97
ATXN3-210ENST00000507965 POTECB2RU33 542 aa8.99□□□□□ -0.97
ATXN3-210ENST00000507965 GDF9O60383 454 aa8.99□□□□□ -0.97
ATXN3-210ENST00000507965 FAM161AQ3B820 660 aa8.99□□□□□ -0.97
ATXN3-210ENST00000507965 SLC6A16Q9GZN6 736 aa8.99□□□□□ -0.97
ATXN3-210ENST00000507965 IQSEC2Q5JU85 1478 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms