RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 ZMYM4Q5VZL5 1548 aa6.03□□□□□ -1.44
ATP2C1-212ENST00000507488 ZFYVE9O95405 1425 aa6.03□□□□□ -1.44
ATP2C1-212ENST00000507488 SLC4A3P48751 1232 aa6.03□□□□□ -1.44
ATP2C1-212ENST00000507488 TRIM35Q9UPQ4 493 aa6.03□□□□□ -1.44
ATP2C1-212ENST00000507488 ARHGEF40Q8TER5 1519 aa6.03□□□□□ -1.44
ATP2C1-212ENST00000507488 CNKSR2Q8WXI2 1034 aa6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 ESF1Q9H501 851 aaKnown RBP6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 MIS18AQ9NYP9 233 aa6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 KIAA1210Q9ULL0 1709 aa6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 FOXO3O43524 673 aa6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 NUDT16Q96DE0 195 aaKnown RBP6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 STAC3Q96MF2 364 aa6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 PLEKHF1Q96S99 279 aa6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 CGNL1Q0VF96 1302 aa6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 MYO3AQ8NEV4 1616 aa6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 TSPYL6Q8N831 410 aa6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 RPGRIP1LQ68CZ1 1315 aa6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 ANKRD36BQ8N2N9 1353 aa6.02□□□□□ -1.45
ATP2C1-212ENST00000507488 SETBP1Q9Y6X0 1596 aa6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 HOXD11P31277 338 aaPredicted RBP6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 RGS3P49796 1198 aa6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 CDCA8Q53HL2 280 aa6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 TRMT2AQ8IZ69 625 aaKnown RBP6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 ATAD2Q6PL18 1390 aa6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 SBNO2Q9Y2G9 1366 aa6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 WASLO00401 505 aaPredicted RBP6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 KCNA6P17658 529 aa6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 HSP90AB2PQ58FF8 381 aa6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 TNRQ92752 1358 aa6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 ADAMTS13Q76LX8 1427 aa6.01□□□□□ -1.45
ATP2C1-212ENST00000507488 SETD1AO15047 1707 aaKnown RBP6□□□□□ -1.45
ATP2C1-212ENST00000507488 PPIP5K1Q6PFW1 1433 aa6□□□□□ -1.45
ATP2C1-212ENST00000507488 AMOTL2Q9Y2J4 779 aa6□□□□□ -1.45
ATP2C1-212ENST00000507488 NOP58Q9Y2X3 529 aaKnown RBP6□□□□□ -1.45
ATP2C1-212ENST00000507488 NKTRP30414 1462 aaKnown RBP6□□□□□ -1.45
ATP2C1-212ENST00000507488 PRKAR2BP31323 418 aa6□□□□□ -1.45
ATP2C1-212ENST00000507488 USHBP1Q8N6Y0 703 aa6□□□□□ -1.45
ATP2C1-212ENST00000507488 ABCC11Q96J66 1382 aa6□□□□□ -1.45
ATP2C1-212ENST00000507488 ANP32AP39687 249 aaKnown RBP6□□□□□ -1.45
ATP2C1-212ENST00000507488 EXOSC9Q06265 439 aaKnown RBP6□□□□□ -1.45
ATP2C1-212ENST00000507488 PCDHB15Q9Y5E8 787 aa6□□□□□ -1.45
ATP2C1-212ENST00000507488 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.99□□□□□ -1.45
ATP2C1-212ENST00000507488 SPATA31D1Q6ZQQ2 1576 aa5.99□□□□□ -1.45
ATP2C1-212ENST00000507488 TMEM2Q9UHN6 1383 aa5.99□□□□□ -1.45
ATP2C1-212ENST00000507488 ZBTB7CA1YPR0 619 aa5.99□□□□□ -1.45
ATP2C1-212ENST00000507488 SEC24BO95487 1268 aa5.99□□□□□ -1.45
ATP2C1-212ENST00000507488 ACEP12821 1306 aa5.99□□□□□ -1.45
ATP2C1-212ENST00000507488 C1orf115Q9H7X2 142 aa5.99□□□□□ -1.45
ATP2C1-212ENST00000507488 TMPOP42166 694 aaKnown RBP5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 RIPK4P57078 832 aa5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 LTV1Q96GA3 475 aaPredicted RBP5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 COL3A1P02461 1466 aaPredicted RBP5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 POLR3AO14802 1390 aaPredicted RBP5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 RARSP54136 660 aaKnown RBP5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 MCM10Q7L590 875 aa5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 RUNDC1Q96C34 613 aa5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 IPO9Q96P70 1041 aaKnown RBP5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 IQSEC2Q5JU85 1478 aa5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 NEURL4Q96JN8 1562 aa5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 PCNTO95613 3336 aa5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 DLC1Q96QB1 1528 aa5.98□□□□□ -1.45
ATP2C1-212ENST00000507488 RGPD8O14715 1765 aaPredicted RBP5.97□□□□□ -1.45
ATP2C1-212ENST00000507488 HSPA2P54652 639 aa5.97□□□□□ -1.45
ATP2C1-212ENST00000507488 RNF216Q9NWF9 866 aaPredicted RBP5.97□□□□□ -1.45
ATP2C1-212ENST00000507488 RIMS1Q86UR5 1692 aaKnown RBP5.97□□□□□ -1.45
ATP2C1-212ENST00000507488 NBR1Q14596 966 aa5.97□□□□□ -1.45
ATP2C1-212ENST00000507488 SSH1Q8WYL5 1049 aa5.97□□□□□ -1.45
ATP2C1-212ENST00000507488 RSPH6AQ9H0K4 717 aa5.97□□□□□ -1.45
ATP2C1-212ENST00000507488 NECTIN2Q92692 538 aa5.97□□□□□ -1.45
ATP2C1-212ENST00000507488 NPC1L1Q9UHC9 1359 aa5.97□□□□□ -1.45
ATP2C1-212ENST00000507488 MED14O60244 1454 aa5.97□□□□□ -1.45
ATP2C1-212ENST00000507488 KDM2BQ8NHM5 1336 aa5.96□□□□□ -1.45
ATP2C1-212ENST00000507488 C14orf37Q86TY3 774 aa5.96□□□□□ -1.45
ATP2C1-212ENST00000507488 ZBTB47Q9UFB7 747 aaPredicted RBP5.96□□□□□ -1.45
ATP2C1-212ENST00000507488 UBR1Q8IWV7 1749 aa5.96□□□□□ -1.45
ATP2C1-212ENST00000507488 DIAPH1O60610 1272 aaKnown RBP5.96□□□□□ -1.46
ATP2C1-212ENST00000507488 MS4A1P11836 297 aa5.96□□□□□ -1.46
ATP2C1-212ENST00000507488 IL13P35225 146 aa5.96□□□□□ -1.46
ATP2C1-212ENST00000507488 ORAI2Q96SN7 254 aa5.96□□□□□ -1.46
ATP2C1-212ENST00000507488 ATP7BP35670 1465 aa5.96□□□□□ -1.46
ATP2C1-212ENST00000507488 SULT6B1Q6IMI4 303 aa5.96□□□□□ -1.46
ATP2C1-212ENST00000507488 HDGFL2Q7Z4V5 671 aaPredicted RBP5.96□□□□□ -1.46
ATP2C1-212ENST00000507488 C8orf58Q8NAV2 365 aa5.96□□□□□ -1.46
ATP2C1-212ENST00000507488 TERF2IPQ9NYB0 399 aa5.96□□□□□ -1.46
ATP2C1-212ENST00000507488 AGLP35573 1532 aa5.95□□□□□ -1.46
ATP2C1-212ENST00000507488 PDE4AP27815 886 aa5.95□□□□□ -1.46
ATP2C1-212ENST00000507488 EIF4A2Q14240 407 aaKnown RBP5.95□□□□□ -1.46
ATP2C1-212ENST00000507488 NOB1Q9ULX3 412 aaKnown RBP5.95□□□□□ -1.46
ATP2C1-212ENST00000507488 CCDC61Q9Y6R9 512 aa5.95□□□□□ -1.46
ATP2C1-212ENST00000507488 SETD1BQ9UPS6 1966 aaKnown RBP5.95□□□□□ -1.46
ATP2C1-212ENST00000507488 LRRC7Q96NW7 1537 aa5.95□□□□□ -1.46
ATP2C1-212ENST00000507488 C3P01024 1663 aa5.95□□□□□ -1.46
ATP2C1-212ENST00000507488 MAP2P11137 1827 aaKnown RBP5.95□□□□□ -1.46
ATP2C1-212ENST00000507488 E9PSI1 815 aa5.95□□□□□ -1.46
ATP2C1-212ENST00000507488 TRIM27P14373 513 aa5.95□□□□□ -1.46
ATP2C1-212ENST00000507488 CPSF1Q10570 1443 aaKnown RBP5.94□□□□□ -1.46
ATP2C1-212ENST00000507488 CANXP27824 592 aaKnown RBP5.94□□□□□ -1.46
ATP2C1-212ENST00000507488 BACH2Q9BYV9 841 aa5.94□□□□□ -1.46
ATP2C1-212ENST00000507488 TTC21BQ7Z4L5 1316 aa5.94□□□□□ -1.46
ATP2C1-212ENST00000507488 NCBP3Q53F19 620 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms