RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 UPF1Q92900 1129 aaKnown RBP eCLIP13.6□□□□□ -0.23
RPS3A-206ENST00000507485 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
RPS3A-206ENST00000507485 PLCG2P16885 1265 aa13.59□□□□□ -0.23
RPS3A-206ENST00000507485 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
RPS3A-206ENST00000507485 RPGRIP1LQ68CZ1 1315 aa13.58□□□□□ -0.24
RPS3A-206ENST00000507485 ADGRF5Q8IZF2 1346 aa13.58□□□□□ -0.24
RPS3A-206ENST00000507485 RXRBP28702 533 aa13.58□□□□□ -0.24
RPS3A-206ENST00000507485 IFT172Q9UG01 1749 aa13.58□□□□□ -0.24
RPS3A-206ENST00000507485 CDK12Q9NYV4 1490 aaPredicted RBP13.57□□□□□ -0.24
RPS3A-206ENST00000507485 SOS2Q07890 1332 aaPredicted RBP13.57□□□□□ -0.24
RPS3A-206ENST00000507485 RGS12O14924 1447 aa13.57□□□□□ -0.24
RPS3A-206ENST00000507485 SPATA31E1Q6ZUB1 1445 aa13.57□□□□□ -0.24
RPS3A-206ENST00000507485 C8orf37Q96NL8 207 aa13.57□□□□□ -0.24
RPS3A-206ENST00000507485 FKBP8Q14318 412 aa13.56□□□□□ -0.24
RPS3A-206ENST00000507485 CDC42BPGQ6DT37 1551 aa13.55□□□□□ -0.24
RPS3A-206ENST00000507485 ST18O60284 1047 aa13.54□□□□□ -0.24
RPS3A-206ENST00000507485 ADAMTS2O95450 1211 aa13.54□□□□□ -0.24
RPS3A-206ENST00000507485 IRX5P78411 483 aaPredicted RBP13.54□□□□□ -0.24
RPS3A-206ENST00000507485 COL22A1Q8NFW1 1626 aaPredicted RBP13.54□□□□□ -0.24
RPS3A-206ENST00000507485 PLEKHH1Q9ULM0 1364 aa13.54□□□□□ -0.24
RPS3A-206ENST00000507485 PXDNQ92626 1479 aa13.53□□□□□ -0.24
RPS3A-206ENST00000507485 RGL3Q3MIN7 710 aa13.53□□□□□ -0.24
RPS3A-206ENST00000507485 DCAF8Q5TAQ9 597 aa13.53□□□□□ -0.24
RPS3A-206ENST00000507485 WAPLQ7Z5K2 1190 aa13.53□□□□□ -0.24
RPS3A-206ENST00000507485 QTRT2Q9H974 415 aaKnown RBP13.53□□□□□ -0.24
RPS3A-206ENST00000507485 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
RPS3A-206ENST00000507485 TECPR2O15040 1411 aa13.52□□□□□ -0.25
RPS3A-206ENST00000507485 MYOM2P54296 1465 aa13.51□□□□□ -0.25
RPS3A-206ENST00000507485 TMEM132EQ6IEE7 984 aa13.51□□□□□ -0.25
RPS3A-206ENST00000507485 MPHOSPH9Q99550 1183 aa13.51□□□□□ -0.25
RPS3A-206ENST00000507485 STK26Q9P289 416 aa13.51□□□□□ -0.25
RPS3A-206ENST00000507485 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
RPS3A-206ENST00000507485 RBM6P78332 1123 aaKnown RBP13.5□□□□□ -0.25
RPS3A-206ENST00000507485 XPCQ01831 940 aaPredicted RBP13.5□□□□□ -0.25
RPS3A-206ENST00000507485 KNDC1Q76NI1 1749 aa13.5□□□□□ -0.25
RPS3A-206ENST00000507485 NGLY1Q96IV0 654 aa13.5□□□□□ -0.25
RPS3A-206ENST00000507485 LRPPRCP42704 1394 aaKnown RBP13.5□□□□□ -0.25
RPS3A-206ENST00000507485 NUTM2FA1L443 756 aa13.49□□□□□ -0.25
RPS3A-206ENST00000507485 OCEL1Q9H607 264 aa13.49□□□□□ -0.25
RPS3A-206ENST00000507485 ESCO1Q5FWF5 840 aa13.49□□□□□ -0.25
RPS3A-206ENST00000507485 FMN2Q9NZ56 1722 aa13.48□□□□□ -0.25
RPS3A-206ENST00000507485 ABCC11Q96J66 1382 aa13.48□□□□□ -0.25
RPS3A-206ENST00000507485 FOXO3O43524 673 aa13.48□□□□□ -0.25
RPS3A-206ENST00000507485 ANKRD30BQ9BXX2 1392 aa13.47□□□□□ -0.25
RPS3A-206ENST00000507485 ATRNO75882 1429 aa13.47□□□□□ -0.25
RPS3A-206ENST00000507485 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
RPS3A-206ENST00000507485 FNBP4Q8N3X1 1017 aaPredicted RBP13.47□□□□□ -0.25
RPS3A-206ENST00000507485 USP21Q9UK80 565 aa13.47□□□□□ -0.25
RPS3A-206ENST00000507485 FBXO3Q9UK99 471 aa13.47□□□□□ -0.25
RPS3A-206ENST00000507485 YTHDC2Q9H6S0 1430 aaKnown RBP13.47□□□□□ -0.25
RPS3A-206ENST00000507485 BCL9LQ86UU0 1499 aa13.46□□□□□ -0.25
RPS3A-206ENST00000507485 SNPHO15079 494 aa13.46□□□□□ -0.25
RPS3A-206ENST00000507485 PYGBP11216 843 aa13.46□□□□□ -0.25
RPS3A-206ENST00000507485 TMEM121BQ9BXQ6 578 aaPredicted RBP13.46□□□□□ -0.25
RPS3A-206ENST00000507485 NRXN1Q9ULB1 1477 aa13.46□□□□□ -0.26
RPS3A-206ENST00000507485 RGPD8O14715 1765 aaPredicted RBP13.45□□□□□ -0.26
RPS3A-206ENST00000507485 NPHP3Q7Z494 1330 aa13.45□□□□□ -0.26
RPS3A-206ENST00000507485 CFAP70Q5T0N1 1121 aa13.43□□□□□ -0.26
RPS3A-206ENST00000507485 TRPC5Q9UL62 973 aaPredicted RBP13.43□□□□□ -0.26
RPS3A-206ENST00000507485 C14orf93Q9H972 538 aaKnown RBP13.42□□□□□ -0.26
RPS3A-206ENST00000507485 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.42□□□□□ -0.26
RPS3A-206ENST00000507485 KIF1AQ12756 1690 aa13.42□□□□□ -0.26
RPS3A-206ENST00000507485 SPATA31A3Q5VYP0 1347 aa13.41□□□□□ -0.26
RPS3A-206ENST00000507485 USP32Q8NFA0 1604 aa13.4□□□□□ -0.26
RPS3A-206ENST00000507485 GLI3P10071 1580 aa13.4□□□□□ -0.26
RPS3A-206ENST00000507485 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.4□□□□□ -0.26
RPS3A-206ENST00000507485 SLIT2O94813 1529 aa13.39□□□□□ -0.27
RPS3A-206ENST00000507485 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
RPS3A-206ENST00000507485 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
RPS3A-206ENST00000507485 SIRT1Q96EB6 747 aa13.39□□□□□ -0.27
RPS3A-206ENST00000507485 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
RPS3A-206ENST00000507485 ABCA3Q99758 1704 aa13.39□□□□□ -0.27
RPS3A-206ENST00000507485 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
RPS3A-206ENST00000507485 SAFB2Q14151 953 aaKnown RBP eCLIP13.38□□□□□ -0.27
RPS3A-206ENST00000507485 KRT28Q7Z3Y7 464 aa13.38□□□□□ -0.27
RPS3A-206ENST00000507485 CABLES1Q8TDN4 633 aa13.37□□□□□ -0.27
RPS3A-206ENST00000507485 GJD4Q96KN9 370 aaPredicted RBP13.37□□□□□ -0.27
RPS3A-206ENST00000507485 PRAM1Q96QH2 718 aa13.37□□□□□ -0.27
RPS3A-206ENST00000507485 RALGAPBQ86X10 1494 aa13.36□□□□□ -0.27
RPS3A-206ENST00000507485 TNS3Q68CZ2 1445 aa13.36□□□□□ -0.27
RPS3A-206ENST00000507485 PHF8Q9UPP1 1060 aa13.36□□□□□ -0.27
RPS3A-206ENST00000507485 DLC1Q96QB1 1528 aa13.36□□□□□ -0.27
RPS3A-206ENST00000507485 DHX57Q6P158 1386 aaKnown RBP13.36□□□□□ -0.27
RPS3A-206ENST00000507485 EP400Q96L91 3159 aa13.36□□□□□ -0.27
RPS3A-206ENST00000507485 BRWD3Q6RI45 1802 aa13.35□□□□□ -0.27
RPS3A-206ENST00000507485 PLCH1Q4KWH8 1693 aa13.35□□□□□ -0.27
RPS3A-206ENST00000507485 ADGRB2O60241 1585 aa13.35□□□□□ -0.27
RPS3A-206ENST00000507485 GSE1Q14687 1217 aa13.34□□□□□ -0.27
RPS3A-206ENST00000507485 UNC5CLQ8IV45 518 aa13.34□□□□□ -0.27
RPS3A-206ENST00000507485 TRPM3Q9HCF6 1732 aaPredicted RBP13.34□□□□□ -0.27
RPS3A-206ENST00000507485 PRR36Q9H6K5 1346 aa13.33□□□□□ -0.28
RPS3A-206ENST00000507485 GOLGA2Q08379 1002 aa13.33□□□□□ -0.28
RPS3A-206ENST00000507485 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
RPS3A-206ENST00000507485 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
RPS3A-206ENST00000507485 PMFBP1Q8TBY8 1022 aa13.33□□□□□ -0.28
RPS3A-206ENST00000507485 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
RPS3A-206ENST00000507485 HIRIP3Q9BW71 556 aaPredicted RBP13.32□□□□□ -0.28
RPS3A-206ENST00000507485 TRAK1Q9UPV9 953 aa13.31□□□□□ -0.28
RPS3A-206ENST00000507485 ANKARQ7Z5J8 1434 aa13.31□□□□□ -0.28
RPS3A-206ENST00000507485 ALS2Q96Q42 1657 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms