RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 NPHP4O75161 1426 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF28-206ENST00000504003 MED14O60244 1454 aa12.85□□□□□ -0.35
ARHGEF28-206ENST00000504003 PIK3R4Q99570 1358 aa12.85□□□□□ -0.35
ARHGEF28-206ENST00000504003 TMEM132EQ6IEE7 984 aa12.84□□□□□ -0.35
ARHGEF28-206ENST00000504003 NRXN3Q9Y4C0 1643 aa12.84□□□□□ -0.35
ARHGEF28-206ENST00000504003 ADGRB1O14514 1584 aa12.83□□□□□ -0.36
ARHGEF28-206ENST00000504003 YTHDC2Q9H6S0 1430 aaKnown RBP12.83□□□□□ -0.36
ARHGEF28-206ENST00000504003 CDCA8Q53HL2 280 aa12.83□□□□□ -0.36
ARHGEF28-206ENST00000504003 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
ARHGEF28-206ENST00000504003 POGKQ9P215 609 aa12.83□□□□□ -0.36
ARHGEF28-206ENST00000504003 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
ARHGEF28-206ENST00000504003 BOLA1Q9Y3E2 137 aa12.83□□□□□ -0.36
ARHGEF28-206ENST00000504003 LRPPRCP42704 1394 aaKnown RBP12.82□□□□□ -0.36
ARHGEF28-206ENST00000504003 ADAMTS13Q76LX8 1427 aa12.82□□□□□ -0.36
ARHGEF28-206ENST00000504003 ST20-MTHFSA0A0A6YYL1 179 aa12.82□□□□□ -0.36
ARHGEF28-206ENST00000504003 SLC26A8Q96RN1 970 aa12.82□□□□□ -0.36
ARHGEF28-206ENST00000504003 STK26Q9P289 416 aa12.82□□□□□ -0.36
ARHGEF28-206ENST00000504003 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF28-206ENST00000504003 NCKAP5LQ9HCH0 1330 aa12.82□□□□□ -0.36
ARHGEF28-206ENST00000504003 SETD1AO15047 1707 aaKnown RBP12.82□□□□□ -0.36
ARHGEF28-206ENST00000504003 ABCC11Q96J66 1382 aa12.81□□□□□ -0.36
ARHGEF28-206ENST00000504003 SOCS7O14512 581 aa12.81□□□□□ -0.36
ARHGEF28-206ENST00000504003 HSPA2P54652 639 aa12.81□□□□□ -0.36
ARHGEF28-206ENST00000504003 TMF1P82094 1093 aa12.81□□□□□ -0.36
ARHGEF28-206ENST00000504003 SIRT1Q96EB6 747 aa12.81□□□□□ -0.36
ARHGEF28-206ENST00000504003 KNDC1Q76NI1 1749 aa12.8□□□□□ -0.36
ARHGEF28-206ENST00000504003 DLC1Q96QB1 1528 aa12.8□□□□□ -0.36
ARHGEF28-206ENST00000504003 DPY19L2Q6NUT2 758 aa12.79□□□□□ -0.36
ARHGEF28-206ENST00000504003 METP08581 1390 aa12.79□□□□□ -0.36
ARHGEF28-206ENST00000504003 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
ARHGEF28-206ENST00000504003 HIRIP3Q9BW71 556 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF28-206ENST00000504003 AMOTL2Q9Y2J4 779 aa12.78□□□□□ -0.36
ARHGEF28-206ENST00000504003 ARHGEF28Q8N1W1 1705 aaKnown RBP12.78□□□□□ -0.36
ARHGEF28-206ENST00000504003 FAM135BQ49AJ0 1406 aa12.78□□□□□ -0.36
ARHGEF28-206ENST00000504003 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.37
ARHGEF28-206ENST00000504003 PRAM1Q96QH2 718 aa12.77□□□□□ -0.37
ARHGEF28-206ENST00000504003 DISP3Q9P2K9 1392 aa12.77□□□□□ -0.37
ARHGEF28-206ENST00000504003 SBNO2Q9Y2G9 1366 aa12.77□□□□□ -0.37
ARHGEF28-206ENST00000504003 TECPR2O15040 1411 aa12.77□□□□□ -0.37
ARHGEF28-206ENST00000504003 ASXL1Q8IXJ9 1541 aa12.77□□□□□ -0.37
ARHGEF28-206ENST00000504003 QRICH2Q9H0J4 1663 aa12.77□□□□□ -0.37
ARHGEF28-206ENST00000504003 CHD2O14647 1828 aaKnown RBP12.76□□□□□ -0.37
ARHGEF28-206ENST00000504003 EMP3P54852 163 aa12.76□□□□□ -0.37
ARHGEF28-206ENST00000504003 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
ARHGEF28-206ENST00000504003 EVC2Q86UK5 1308 aa12.76□□□□□ -0.37
ARHGEF28-206ENST00000504003 CPS1P31327 1500 aa12.76□□□□□ -0.37
ARHGEF28-206ENST00000504003 KCNA6P17658 529 aa12.75□□□□□ -0.37
ARHGEF28-206ENST00000504003 PTCH1Q13635 1447 aa12.75□□□□□ -0.37
ARHGEF28-206ENST00000504003 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
ARHGEF28-206ENST00000504003 POLR3GLQ9BT43 218 aa12.74□□□□□ -0.37
ARHGEF28-206ENST00000504003 XRN1Q8IZH2 1706 aaKnown RBP12.73□□□□□ -0.37
ARHGEF28-206ENST00000504003 SAFB2Q14151 953 aaKnown RBP eCLIP12.72□□□□□ -0.37
ARHGEF28-206ENST00000504003 PUS7Q96PZ0 661 aaKnown RBP12.72□□□□□ -0.37
ARHGEF28-206ENST00000504003 TESK2Q96S53 571 aa12.72□□□□□ -0.37
ARHGEF28-206ENST00000504003 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
ARHGEF28-206ENST00000504003 C14orf37Q86TY3 774 aa12.71□□□□□ -0.37
ARHGEF28-206ENST00000504003 TAOK2Q9UL54 1235 aa12.71□□□□□ -0.37
ARHGEF28-206ENST00000504003 PTPRUQ92729 1446 aa12.71□□□□□ -0.38
ARHGEF28-206ENST00000504003 CCDC7Q96M83 1385 aa12.7□□□□□ -0.38
ARHGEF28-206ENST00000504003 NWD1Q149M9 1564 aa12.7□□□□□ -0.38
ARHGEF28-206ENST00000504003 SRPK2P78362 688 aaKnown RBP12.7□□□□□ -0.38
ARHGEF28-206ENST00000504003 WAPLQ7Z5K2 1190 aa12.7□□□□□ -0.38
ARHGEF28-206ENST00000504003 CERKQ8TCT0 537 aa12.7□□□□□ -0.38
ARHGEF28-206ENST00000504003 ROBO2Q9HCK4 1378 aa12.69□□□□□ -0.38
ARHGEF28-206ENST00000504003 KIF7Q2M1P5 1343 aa12.69□□□□□ -0.38
ARHGEF28-206ENST00000504003 MINK1Q8N4C8 1332 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF28-206ENST00000504003 SOX12O15370 315 aa12.69□□□□□ -0.38
ARHGEF28-206ENST00000504003 PROSER2Q86WR7 435 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF28-206ENST00000504003 WASHC2AQ641Q2 1341 aa12.68□□□□□ -0.38
ARHGEF28-206ENST00000504003 ATAD2Q6PL18 1390 aa12.68□□□□□ -0.38
ARHGEF28-206ENST00000504003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF28-206ENST00000504003 ZNF710Q8N1W2 664 aa12.67□□□□□ -0.38
ARHGEF28-206ENST00000504003 RNF25Q96BH1 459 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF28-206ENST00000504003 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF28-206ENST00000504003 NCOA3Q9Y6Q9 1424 aa12.67□□□□□ -0.38
ARHGEF28-206ENST00000504003 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
ARHGEF28-206ENST00000504003 ADGRB2O60241 1585 aa12.66□□□□□ -0.38
ARHGEF28-206ENST00000504003 WASLO00401 505 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF28-206ENST00000504003 DDX10Q13206 875 aaKnown RBP12.66□□□□□ -0.38
ARHGEF28-206ENST00000504003 DOK7Q18PE1 504 aa12.66□□□□□ -0.38
ARHGEF28-206ENST00000504003 CDK19Q9BWU1 502 aa12.66□□□□□ -0.38
ARHGEF28-206ENST00000504003 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
ARHGEF28-206ENST00000504003 DIEXFQ68CQ4 756 aaKnown RBP12.65□□□□□ -0.38
ARHGEF28-206ENST00000504003 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF28-206ENST00000504003 RIMBP2O15034 1052 aa12.64□□□□□ -0.39
ARHGEF28-206ENST00000504003 TMC1Q8TDI8 760 aa12.64□□□□□ -0.39
ARHGEF28-206ENST00000504003 ADGRL3Q9HAR2 1447 aa12.63□□□□□ -0.39
ARHGEF28-206ENST00000504003 FAM205CA6NFA0 338 aa12.63□□□□□ -0.39
ARHGEF28-206ENST00000504003 C19orf44Q9H6X5 657 aa12.63□□□□□ -0.39
ARHGEF28-206ENST00000504003 TULP4Q9NRJ4 1543 aa12.62□□□□□ -0.39
ARHGEF28-206ENST00000504003 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF28-206ENST00000504003 MSH6P52701 1360 aa12.62□□□□□ -0.39
ARHGEF28-206ENST00000504003 ATF3P18847 181 aa12.62□□□□□ -0.39
ARHGEF28-206ENST00000504003 MICALL2Q8IY33 904 aa12.62□□□□□ -0.39
ARHGEF28-206ENST00000504003 HS3ST6Q96QI5 342 aa12.62□□□□□ -0.39
ARHGEF28-206ENST00000504003 TERF2IPQ9NYB0 399 aa12.62□□□□□ -0.39
ARHGEF28-206ENST00000504003 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF28-206ENST00000504003 ITSN1Q15811 1721 aa12.61□□□□□ -0.39
ARHGEF28-206ENST00000504003 CDC42BPGQ6DT37 1551 aa12.6□□□□□ -0.39
ARHGEF28-206ENST00000504003 NALCNQ8IZF0 1738 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms