RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 MST1RQ04912 1400 aa18.32■□□□□ 0.52
PRDM2-213ENST00000503842 ATF3P18847 181 aa18.32■□□□□ 0.52
PRDM2-213ENST00000503842 C1orf167Q5SNV9 1468 aa18.32■□□□□ 0.52
PRDM2-213ENST00000503842 CPSF1Q10570 1443 aaKnown RBP18.32■□□□□ 0.52
PRDM2-213ENST00000503842 A0A1W2PP64 1363 aa18.31■□□□□ 0.52
PRDM2-213ENST00000503842 CARD14Q9BXL6 1004 aa18.31■□□□□ 0.52
PRDM2-213ENST00000503842 TERF2IPQ9NYB0 399 aa18.31■□□□□ 0.52
PRDM2-213ENST00000503842 REM2Q8IYK8 340 aaPredicted RBP18.3■□□□□ 0.52
PRDM2-213ENST00000503842 PROM2Q8N271 834 aa18.3■□□□□ 0.52
PRDM2-213ENST00000503842 AKAP12Q02952 1782 aa18.29■□□□□ 0.52
PRDM2-213ENST00000503842 POLR3AO14802 1390 aaPredicted RBP18.29■□□□□ 0.52
PRDM2-213ENST00000503842 HDGFL2Q7Z4V5 671 aaPredicted RBP18.28■□□□□ 0.52
PRDM2-213ENST00000503842 NSD3Q9BZ95 1437 aa18.28■□□□□ 0.52
PRDM2-213ENST00000503842 PHF8Q9UPP1 1060 aa18.27■□□□□ 0.52
PRDM2-213ENST00000503842 MON2Q7Z3U7 1717 aa18.26■□□□□ 0.51
PRDM2-213ENST00000503842 ACEP12821 1306 aa18.26■□□□□ 0.51
PRDM2-213ENST00000503842 KNSTRNQ9Y448 316 aa18.26■□□□□ 0.51
PRDM2-213ENST00000503842 AMER1Q5JTC6 1135 aaPredicted RBP18.25■□□□□ 0.51
PRDM2-213ENST00000503842 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
PRDM2-213ENST00000503842 NPC1L1Q9UHC9 1359 aa18.25■□□□□ 0.51
PRDM2-213ENST00000503842 ESCO1Q5FWF5 840 aa18.24■□□□□ 0.51
PRDM2-213ENST00000503842 ORAI2Q96SN7 254 aa18.24■□□□□ 0.51
PRDM2-213ENST00000503842 KTN1Q86UP2 1357 aaKnown RBP18.24■□□□□ 0.51
PRDM2-213ENST00000503842 KIF1AQ12756 1690 aa18.24■□□□□ 0.51
PRDM2-213ENST00000503842 USP6P35125 1406 aa18.23■□□□□ 0.51
PRDM2-213ENST00000503842 EDC4Q6P2E9 1401 aaKnown RBP18.23■□□□□ 0.51
PRDM2-213ENST00000503842 SPDYE1Q8NFV5 336 aaPredicted RBP18.23■□□□□ 0.51
PRDM2-213ENST00000503842 SSH2Q76I76 1423 aa18.23■□□□□ 0.51
PRDM2-213ENST00000503842 NRKQ7Z2Y5 1582 aa18.22■□□□□ 0.51
PRDM2-213ENST00000503842 NGDNQ8NEJ9 315 aaKnown RBP18.22■□□□□ 0.51
PRDM2-213ENST00000503842 SLAIN2Q9P270 581 aa18.22■□□□□ 0.51
PRDM2-213ENST00000503842 IQSEC2Q5JU85 1478 aa18.21■□□□□ 0.51
PRDM2-213ENST00000503842 CLEC11AQ9Y240 323 aa18.21■□□□□ 0.51
PRDM2-213ENST00000503842 CGNL1Q0VF96 1302 aa18.21■□□□□ 0.51
PRDM2-213ENST00000503842 ANP32CO43423 234 aa18.2■□□□□ 0.5
PRDM2-213ENST00000503842 FBXO3Q9UK99 471 aa18.2■□□□□ 0.5
PRDM2-213ENST00000503842 BRD4O60885 1362 aaPredicted RBP18.19■□□□□ 0.5
PRDM2-213ENST00000503842 PRKRIP1Q9H875 184 aaPredicted RBP18.19■□□□□ 0.5
PRDM2-213ENST00000503842 TTC21BQ7Z4L5 1316 aa18.19■□□□□ 0.5
PRDM2-213ENST00000503842 NSD2O96028 1365 aa18.18■□□□□ 0.5
PRDM2-213ENST00000503842 BRINP3Q76B58 766 aa18.18■□□□□ 0.5
PRDM2-213ENST00000503842 PARD3Q8TEW0 1356 aa18.17■□□□□ 0.5
PRDM2-213ENST00000503842 CC2D1BQ5T0F9 858 aaKnown RBP18.17■□□□□ 0.5
PRDM2-213ENST00000503842 MIER1Q8N108 512 aa18.17■□□□□ 0.5
PRDM2-213ENST00000503842 FYB1O15117 783 aa18.16■□□□□ 0.5
PRDM2-213ENST00000503842 TTC21AQ8NDW8 1320 aa18.16■□□□□ 0.5
PRDM2-213ENST00000503842 KIF20BQ96Q89 1820 aa18.16■□□□□ 0.5
PRDM2-213ENST00000503842 FOXO3O43524 673 aa18.15■□□□□ 0.5
PRDM2-213ENST00000503842 RALBP1Q15311 655 aa18.15■□□□□ 0.5
PRDM2-213ENST00000503842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.5
PRDM2-213ENST00000503842 PSME1Q06323 249 aa18.14■□□□□ 0.49
PRDM2-213ENST00000503842 CERKQ8TCT0 537 aa18.14■□□□□ 0.49
PRDM2-213ENST00000503842 NPHP3Q7Z494 1330 aa18.14■□□□□ 0.49
PRDM2-213ENST00000503842 ANKRD26Q9UPS8 1709 aa18.14■□□□□ 0.49
PRDM2-213ENST00000503842 TRPM3Q9HCF6 1732 aaPredicted RBP18.13■□□□□ 0.49
PRDM2-213ENST00000503842 CNGB1Q14028 1251 aaPredicted RBP18.13■□□□□ 0.49
PRDM2-213ENST00000503842 NME9Q86XW9 330 aa18.13■□□□□ 0.49
PRDM2-213ENST00000503842 KRT28Q7Z3Y7 464 aa18.12■□□□□ 0.49
PRDM2-213ENST00000503842 GGNBP2Q9H3C7 697 aa18.12■□□□□ 0.49
PRDM2-213ENST00000503842 PXDNQ92626 1479 aa18.12■□□□□ 0.49
PRDM2-213ENST00000503842 TOM1O60784 492 aa18.11■□□□□ 0.49
PRDM2-213ENST00000503842 USP31Q70CQ4 1352 aa18.11■□□□□ 0.49
PRDM2-213ENST00000503842 NHSL1Q5SYE7 1610 aa18.11■□□□□ 0.49
PRDM2-213ENST00000503842 PIK3C2AO00443 1686 aa18.11■□□□□ 0.49
PRDM2-213ENST00000503842 ROBO1Q9Y6N7 1651 aa18.1■□□□□ 0.49
PRDM2-213ENST00000503842 OVOS2A0A0J9YW53 1432 aa18.1■□□□□ 0.49
PRDM2-213ENST00000503842 OVOS2Q6IE36 1432 aa18.1■□□□□ 0.49
PRDM2-213ENST00000503842 SBNO1A3KN83 1393 aa18.1■□□□□ 0.49
PRDM2-213ENST00000503842 PITPNM1O00562 1244 aa18.1■□□□□ 0.49
PRDM2-213ENST00000503842 XPCQ01831 940 aaPredicted RBP18.1■□□□□ 0.49
PRDM2-213ENST00000503842 DDX17Q92841 729 aaKnown RBP18.1■□□□□ 0.49
PRDM2-213ENST00000503842 USP54Q70EL1 1684 aa18.09■□□□□ 0.49
PRDM2-213ENST00000503842 MORC1Q86VD1 984 aa18.09■□□□□ 0.49
PRDM2-213ENST00000503842 ZRANB1Q9UGI0 708 aa18.09■□□□□ 0.49
PRDM2-213ENST00000503842 SOS2Q07890 1332 aaPredicted RBP18.08■□□□□ 0.49
PRDM2-213ENST00000503842 MYBBP1AQ9BQG0 1328 aaKnown RBP18.08■□□□□ 0.49
PRDM2-213ENST00000503842 ALS2Q96Q42 1657 aa18.07■□□□□ 0.48
PRDM2-213ENST00000503842 PAK3O75914 559 aaPredicted RBP18.07■□□□□ 0.48
PRDM2-213ENST00000503842 AHDC1Q5TGY3 1603 aaPredicted RBP18.07■□□□□ 0.48
PRDM2-213ENST00000503842 MARF1Q9Y4F3 1742 aaKnown RBP18.06■□□□□ 0.48
PRDM2-213ENST00000503842 UBAP1LF5GYI3 381 aa18.06■□□□□ 0.48
PRDM2-213ENST00000503842 CCER2I3L3R5 266 aa18.06■□□□□ 0.48
PRDM2-213ENST00000503842 COG3Q96JB2 828 aa18.06■□□□□ 0.48
PRDM2-213ENST00000503842 TNS3Q68CZ2 1445 aa18.06■□□□□ 0.48
PRDM2-213ENST00000503842 PPP2R1AP30153 589 aa18.05■□□□□ 0.48
PRDM2-213ENST00000503842 ABTB2Q8N961 1025 aa18.05■□□□□ 0.48
PRDM2-213ENST00000503842 SPATA31A3Q5VYP0 1347 aa18.04■□□□□ 0.48
PRDM2-213ENST00000503842 NLRP6P59044 892 aa18.03■□□□□ 0.48
PRDM2-213ENST00000503842 NLRP13Q86W25 1043 aa18.03■□□□□ 0.48
PRDM2-213ENST00000503842 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
PRDM2-213ENST00000503842 USP19O94966 1318 aa18.01■□□□□ 0.47
PRDM2-213ENST00000503842 PRR29P0C7W0 189 aa18.01■□□□□ 0.47
PRDM2-213ENST00000503842 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
PRDM2-213ENST00000503842 NUTM2GQ5VZR2 741 aa18.01■□□□□ 0.47
PRDM2-213ENST00000503842 ARHGEF10O15013 1369 aa18.01■□□□□ 0.47
PRDM2-213ENST00000503842 SLIT3O75094 1523 aa18■□□□□ 0.47
PRDM2-213ENST00000503842 PIP4K2BP78356 416 aa18■□□□□ 0.47
PRDM2-213ENST00000503842 CCDC184Q52MB2 194 aa18■□□□□ 0.47
PRDM2-213ENST00000503842 MED1Q15648 1581 aaPredicted RBP18■□□□□ 0.47
PRDM2-213ENST00000503842 SMG6Q86US8 1419 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms