RNA–Protein interactions for RNA: ENST00000503580.1

LINC01060-202, Transcript of long intergenic non-protein coding RNA 1060, humanhuman

TSL 3

Gene LINC01060, Length 418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01060-202ENST00000503580 PIP4K2BP78356 416 aa18.56■□□□□ 0.56
LINC01060-202ENST00000503580 KRT28Q7Z3Y7 464 aa18.56■□□□□ 0.56
LINC01060-202ENST00000503580 NSD2O96028 1365 aa18.55■□□□□ 0.56
LINC01060-202ENST00000503580 CGNL1Q0VF96 1302 aa18.55■□□□□ 0.56
LINC01060-202ENST00000503580 KNSTRNQ9Y448 316 aa18.54■□□□□ 0.56
LINC01060-202ENST00000503580 TNS3Q68CZ2 1445 aa18.54■□□□□ 0.56
LINC01060-202ENST00000503580 SPATA31A3Q5VYP0 1347 aa18.52■□□□□ 0.56
LINC01060-202ENST00000503580 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
LINC01060-202ENST00000503580 TRPM3Q9HCF6 1732 aaPredicted RBP18.52■□□□□ 0.56
LINC01060-202ENST00000503580 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.56
LINC01060-202ENST00000503580 DDX17Q92841 729 aaKnown RBP18.52■□□□□ 0.56
LINC01060-202ENST00000503580 ARHGEF10O15013 1369 aa18.52■□□□□ 0.55
LINC01060-202ENST00000503580 USP31Q70CQ4 1352 aa18.52■□□□□ 0.55
LINC01060-202ENST00000503580 XPCQ01831 940 aaPredicted RBP18.5■□□□□ 0.55
LINC01060-202ENST00000503580 COL16A1Q07092 1604 aaPredicted RBP18.49■□□□□ 0.55
LINC01060-202ENST00000503580 FYB1O15117 783 aa18.49■□□□□ 0.55
LINC01060-202ENST00000503580 LRRC59Q96AG4 307 aaKnown RBP18.49■□□□□ 0.55
LINC01060-202ENST00000503580 OVOS2A0A0J9YW53 1432 aa18.49■□□□□ 0.55
LINC01060-202ENST00000503580 OVOS2Q6IE36 1432 aa18.49■□□□□ 0.55
LINC01060-202ENST00000503580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
LINC01060-202ENST00000503580 FBXO41Q8TF61 875 aa18.48■□□□□ 0.55
LINC01060-202ENST00000503580 MED1Q15648 1581 aaPredicted RBP18.47■□□□□ 0.55
LINC01060-202ENST00000503580 PAK3O75914 559 aaPredicted RBP18.47■□□□□ 0.55
LINC01060-202ENST00000503580 NME9Q86XW9 330 aa18.47■□□□□ 0.55
LINC01060-202ENST00000503580 ALS2Q96Q42 1657 aa18.47■□□□□ 0.55
LINC01060-202ENST00000503580 ABTB2Q8N961 1025 aa18.46■□□□□ 0.55
LINC01060-202ENST00000503580 PIK3C2AO00443 1686 aa18.46■□□□□ 0.55
LINC01060-202ENST00000503580 USP54Q70EL1 1684 aa18.46■□□□□ 0.55
LINC01060-202ENST00000503580 USP19O94966 1318 aa18.46■□□□□ 0.55
LINC01060-202ENST00000503580 PHLPP1O60346 1717 aa18.45■□□□□ 0.54
LINC01060-202ENST00000503580 NLRP13Q86W25 1043 aa18.44■□□□□ 0.54
LINC01060-202ENST00000503580 COG3Q96JB2 828 aa18.44■□□□□ 0.54
LINC01060-202ENST00000503580 PNPLA6Q8IY17 1366 aa18.43■□□□□ 0.54
LINC01060-202ENST00000503580 NLRP6P59044 892 aa18.43■□□□□ 0.54
LINC01060-202ENST00000503580 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
LINC01060-202ENST00000503580 SLIT3O75094 1523 aa18.43■□□□□ 0.54
LINC01060-202ENST00000503580 JCADQ9P266 1359 aa18.42■□□□□ 0.54
LINC01060-202ENST00000503580 PARD3Q8TEW0 1356 aa18.42■□□□□ 0.54
LINC01060-202ENST00000503580 HSPA1LP34931 641 aa18.41■□□□□ 0.54
LINC01060-202ENST00000503580 COL22A1Q8NFW1 1626 aaPredicted RBP18.41■□□□□ 0.54
LINC01060-202ENST00000503580 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
LINC01060-202ENST00000503580 KIF20BQ96Q89 1820 aa18.39■□□□□ 0.54
LINC01060-202ENST00000503580 RALBP1Q15311 655 aa18.39■□□□□ 0.53
LINC01060-202ENST00000503580 CC2D1BQ5T0F9 858 aaKnown RBP18.39■□□□□ 0.53
LINC01060-202ENST00000503580 LMOD2Q6P5Q4 547 aa18.39■□□□□ 0.53
LINC01060-202ENST00000503580 KCNH5Q8NCM2 988 aa18.39■□□□□ 0.53
LINC01060-202ENST00000503580 ZRANB1Q9UGI0 708 aa18.39■□□□□ 0.53
LINC01060-202ENST00000503580 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
LINC01060-202ENST00000503580 MORC1Q86VD1 984 aa18.38■□□□□ 0.53
LINC01060-202ENST00000503580 NUTM2GQ5VZR2 741 aa18.37■□□□□ 0.53
LINC01060-202ENST00000503580 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
LINC01060-202ENST00000503580 NFAT5O94916 1531 aa18.37■□□□□ 0.53
LINC01060-202ENST00000503580 SHPRHQ149N8 1683 aa18.37■□□□□ 0.53
LINC01060-202ENST00000503580 ANKRD26Q9UPS8 1709 aa18.37■□□□□ 0.53
LINC01060-202ENST00000503580 ANP32CO43423 234 aa18.36■□□□□ 0.53
LINC01060-202ENST00000503580 MARF1Q9Y4F3 1742 aaKnown RBP18.35■□□□□ 0.53
LINC01060-202ENST00000503580 SPATA31A6Q5VVP1 1343 aa18.35■□□□□ 0.53
LINC01060-202ENST00000503580 GCP02774 474 aa18.35■□□□□ 0.53
LINC01060-202ENST00000503580 SMG6Q86US8 1419 aaKnown RBP18.34■□□□□ 0.53
LINC01060-202ENST00000503580 CPDO75976 1380 aa18.34■□□□□ 0.53
LINC01060-202ENST00000503580 CRYBG1Q9Y4K1 1723 aa18.34■□□□□ 0.53
LINC01060-202ENST00000503580 KIF24Q5T7B8 1368 aa18.33■□□□□ 0.53
LINC01060-202ENST00000503580 PHRF1Q9P1Y6 1649 aaKnown RBP18.33■□□□□ 0.52
LINC01060-202ENST00000503580 MYBBP1AQ9BQG0 1328 aaKnown RBP18.31■□□□□ 0.52
LINC01060-202ENST00000503580 ABCC6O95255 1503 aa18.31■□□□□ 0.52
LINC01060-202ENST00000503580 RTL1A6NKG5 1358 aa18.3■□□□□ 0.52
LINC01060-202ENST00000503580 ARHGEF25Q86VW2 580 aa18.3■□□□□ 0.52
LINC01060-202ENST00000503580 CABLES1Q8TDN4 633 aa18.3■□□□□ 0.52
LINC01060-202ENST00000503580 ABCA3Q99758 1704 aa18.29■□□□□ 0.52
LINC01060-202ENST00000503580 PPP2R1AP30153 589 aa18.29■□□□□ 0.52
LINC01060-202ENST00000503580 MAP3K19Q56UN5 1328 aa18.28■□□□□ 0.52
LINC01060-202ENST00000503580 HAP1P54257 671 aaPredicted RBP18.28■□□□□ 0.52
LINC01060-202ENST00000503580 POLKQ9UBT6 870 aa18.28■□□□□ 0.52
LINC01060-202ENST00000503580 CDK12Q9NYV4 1490 aaPredicted RBP18.27■□□□□ 0.52
LINC01060-202ENST00000503580 TNNT2P45379 298 aaPredicted RBP18.27■□□□□ 0.52
LINC01060-202ENST00000503580 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.52
LINC01060-202ENST00000503580 INSRP06213 1382 aa18.27■□□□□ 0.51
LINC01060-202ENST00000503580 KIAA0232Q92628 1395 aa18.27■□□□□ 0.51
LINC01060-202ENST00000503580 SOX12O15370 315 aa18.26■□□□□ 0.51
LINC01060-202ENST00000503580 FLT4P35916 1363 aa18.26■□□□□ 0.51
LINC01060-202ENST00000503580 RRS1Q15050 365 aaKnown RBP18.25■□□□□ 0.51
LINC01060-202ENST00000503580 BLMP54132 1417 aaPredicted RBP18.24■□□□□ 0.51
LINC01060-202ENST00000503580 LRP6O75581 1613 aa18.24■□□□□ 0.51
LINC01060-202ENST00000503580 FBLN1P23142 703 aa18.24■□□□□ 0.51
LINC01060-202ENST00000503580 MTHFSP49914 203 aa18.24■□□□□ 0.51
LINC01060-202ENST00000503580 ZC3H6P61129 1189 aaKnown RBP18.24■□□□□ 0.51
LINC01060-202ENST00000503580 EMILIN1Q9Y6C2 1016 aa18.24■□□□□ 0.51
LINC01060-202ENST00000503580 IP6K1Q92551 441 aa18.23■□□□□ 0.51
LINC01060-202ENST00000503580 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
LINC01060-202ENST00000503580 PLEKHG5O94827 1062 aa18.22■□□□□ 0.51
LINC01060-202ENST00000503580 HOXC9P31274 260 aa18.22■□□□□ 0.51
LINC01060-202ENST00000503580 AMPHP49418 695 aa18.22■□□□□ 0.51
LINC01060-202ENST00000503580 COL3A1P02461 1466 aaPredicted RBP18.2■□□□□ 0.5
LINC01060-202ENST00000503580 LMO7Q8WWI1 1683 aa18.2■□□□□ 0.5
LINC01060-202ENST00000503580 NUTM2BA6NNL0 878 aaPredicted RBP18.2■□□□□ 0.5
LINC01060-202ENST00000503580 NUTM2EB1AL46 878 aaPredicted RBP18.2■□□□□ 0.5
LINC01060-202ENST00000503580 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
LINC01060-202ENST00000503580 NUTM2AQ8IVF1 878 aaPredicted RBP18.2■□□□□ 0.5
LINC01060-202ENST00000503580 CFAP53Q96M91 514 aa18.2■□□□□ 0.5
LINC01060-202ENST00000503580 FAM83GA6ND36 823 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms