RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 MARCH6O60337 910 aa19.55■□□□□ 0.72
HMGXB3-202ENST00000503427 PES1O00541 588 aaKnown RBP19.54■□□□□ 0.72
HMGXB3-202ENST00000503427 BACH2Q9BYV9 841 aa19.54■□□□□ 0.72
HMGXB3-202ENST00000503427 NINLQ9Y2I6 1382 aa19.54■□□□□ 0.72
HMGXB3-202ENST00000503427 A0A0U1RQG5 324 aaPredicted RBP19.53■□□□□ 0.72
HMGXB3-202ENST00000503427 FANCAO15360 1455 aa19.53■□□□□ 0.72
HMGXB3-202ENST00000503427 TRAK2O60296 914 aa19.53■□□□□ 0.72
HMGXB3-202ENST00000503427 TATP17735 454 aaPredicted RBP19.53■□□□□ 0.72
HMGXB3-202ENST00000503427 PPP6R1Q9UPN7 881 aa19.53■□□□□ 0.72
HMGXB3-202ENST00000503427 AIMP1Q12904 312 aaKnown RBP19.53■□□□□ 0.72
HMGXB3-202ENST00000503427 NOL10Q9BSC4 688 aaKnown RBP19.52■□□□□ 0.72
HMGXB3-202ENST00000503427 SASS6Q6UVJ0 657 aa19.52■□□□□ 0.72
HMGXB3-202ENST00000503427 ZNF592Q92610 1267 aa19.52■□□□□ 0.72
HMGXB3-202ENST00000503427 DENND4BO75064 1496 aaPredicted RBP19.52■□□□□ 0.72
HMGXB3-202ENST00000503427 TRDNQ13061 729 aa19.52■□□□□ 0.72
HMGXB3-202ENST00000503427 GCC1Q96CN9 775 aa19.52■□□□□ 0.72
HMGXB3-202ENST00000503427 NASPP49321 788 aaPredicted RBP19.52■□□□□ 0.71
HMGXB3-202ENST00000503427 TPM2P07951 284 aa19.51■□□□□ 0.71
HMGXB3-202ENST00000503427 GPS2Q13227 327 aa19.51■□□□□ 0.71
HMGXB3-202ENST00000503427 VSIG10Q8N0Z9 540 aa19.51■□□□□ 0.71
HMGXB3-202ENST00000503427 NSD3Q9BZ95 1437 aa19.51■□□□□ 0.71
HMGXB3-202ENST00000503427 FCHSD2O94868 740 aa19.51■□□□□ 0.71
HMGXB3-202ENST00000503427 AMOTL1Q8IY63 956 aa19.51■□□□□ 0.71
HMGXB3-202ENST00000503427 CCAR2Q8N163 923 aaKnown RBP19.51■□□□□ 0.71
HMGXB3-202ENST00000503427 HOOK1Q9UJC3 728 aaKnown RBP19.51■□□□□ 0.71
HMGXB3-202ENST00000503427 NUDT16Q96DE0 195 aaKnown RBP19.5■□□□□ 0.71
HMGXB3-202ENST00000503427 RPRD2Q5VT52 1461 aaKnown RBP19.5■□□□□ 0.71
HMGXB3-202ENST00000503427 GPATCH8Q9UKJ3 1502 aaKnown RBP19.5■□□□□ 0.71
HMGXB3-202ENST00000503427 FAM13BQ9NYF5 915 aa19.5■□□□□ 0.71
HMGXB3-202ENST00000503427 MSH5O43196 834 aa19.5■□□□□ 0.71
HMGXB3-202ENST00000503427 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.49■□□□□ 0.71
HMGXB3-202ENST00000503427 MCM2P49736 904 aa19.49■□□□□ 0.71
HMGXB3-202ENST00000503427 VPS37DQ86XT2 251 aa19.49■□□□□ 0.71
HMGXB3-202ENST00000503427 FAM135AQ9P2D6 1515 aa19.49■□□□□ 0.71
HMGXB3-202ENST00000503427 RABEP1Q15276 862 aa19.49■□□□□ 0.71
HMGXB3-202ENST00000503427 CCDC73Q6ZRK6 1079 aa19.49■□□□□ 0.71
HMGXB3-202ENST00000503427 RAPGEF6Q8TEU7 1601 aa19.48■□□□□ 0.71
HMGXB3-202ENST00000503427 DHX29Q7Z478 1369 aaKnown RBP19.48■□□□□ 0.71
HMGXB3-202ENST00000503427 MBD3O95983 291 aa19.48■□□□□ 0.71
HMGXB3-202ENST00000503427 APPP05067 770 aa19.48■□□□□ 0.71
HMGXB3-202ENST00000503427 BCAR3O75815 825 aa19.48■□□□□ 0.71
HMGXB3-202ENST00000503427 ZNF428Q96B54 188 aa19.48■□□□□ 0.71
HMGXB3-202ENST00000503427 CCDC39Q9UFE4 941 aa19.48■□□□□ 0.71
HMGXB3-202ENST00000503427 CEP89Q96ST8 783 aa19.47■□□□□ 0.71
HMGXB3-202ENST00000503427 PIP4K2BP78356 416 aa19.47■□□□□ 0.71
HMGXB3-202ENST00000503427 ANKRD20A12PQ8NF67 263 aa19.47■□□□□ 0.71
HMGXB3-202ENST00000503427 TSR2Q969E8 191 aaKnown RBP19.47■□□□□ 0.71
HMGXB3-202ENST00000503427 CCDC70Q6NSX1 233 aa19.47■□□□□ 0.71
HMGXB3-202ENST00000503427 CLASRPQ8N2M8 674 aaKnown RBP19.47■□□□□ 0.71
HMGXB3-202ENST00000503427 CNTROBQ8N137 903 aa19.46■□□□□ 0.71
HMGXB3-202ENST00000503427 PSMA5P28066 241 aa19.46■□□□□ 0.71
HMGXB3-202ENST00000503427 HDGFL1Q5TGJ6 251 aa19.46■□□□□ 0.71
HMGXB3-202ENST00000503427 ZNF530Q6P9A1 599 aaPredicted RBP19.45■□□□□ 0.7
HMGXB3-202ENST00000503427 IPO7O95373 1038 aaKnown RBP19.45■□□□□ 0.7
HMGXB3-202ENST00000503427 HOMER1Q86YM7 354 aa19.45■□□□□ 0.7
HMGXB3-202ENST00000503427 NOB1Q9ULX3 412 aaKnown RBP19.45■□□□□ 0.7
HMGXB3-202ENST00000503427 SPG7Q9UQ90 795 aa19.45■□□□□ 0.7
HMGXB3-202ENST00000503427 CCT4P50991 539 aaKnown RBP19.44■□□□□ 0.7
HMGXB3-202ENST00000503427 CCDC184Q52MB2 194 aa19.44■□□□□ 0.7
HMGXB3-202ENST00000503427 CCDC47Q96A33 483 aaKnown RBP19.44■□□□□ 0.7
HMGXB3-202ENST00000503427 LETM1O95202 739 aaPredicted RBP19.44■□□□□ 0.7
HMGXB3-202ENST00000503427 SURF6O75683 361 aaKnown RBP19.44■□□□□ 0.7
HMGXB3-202ENST00000503427 GNAI2P04899 355 aa19.44■□□□□ 0.7
HMGXB3-202ENST00000503427 SLC4A2P04920 1241 aa19.44■□□□□ 0.7
HMGXB3-202ENST00000503427 IDI1Q13907 227 aa19.44■□□□□ 0.7
HMGXB3-202ENST00000503427 NEUROD6Q96NK8 337 aa19.44■□□□□ 0.7
HMGXB3-202ENST00000503427 ATP10BO94823 1461 aa19.43■□□□□ 0.7
HMGXB3-202ENST00000503427 NEK4P51957 841 aa19.43■□□□□ 0.7
HMGXB3-202ENST00000503427 UGGT2Q9NYU1 1516 aa19.43■□□□□ 0.7
HMGXB3-202ENST00000503427 VPS53Q5VIR6 699 aa19.43■□□□□ 0.7
HMGXB3-202ENST00000503427 ADGRF5Q8IZF2 1346 aa19.43■□□□□ 0.7
HMGXB3-202ENST00000503427 ATF7IPQ6VMQ6 1270 aa19.42■□□□□ 0.7
HMGXB3-202ENST00000503427 CAVIN1Q6NZI2 390 aaKnown RBP19.42■□□□□ 0.7
HMGXB3-202ENST00000503427 KCNH5Q8NCM2 988 aa19.42■□□□□ 0.7
HMGXB3-202ENST00000503427 RRS1Q15050 365 aaKnown RBP19.42■□□□□ 0.7
HMGXB3-202ENST00000503427 NFXL1Q6ZNB6 911 aa19.42■□□□□ 0.7
HMGXB3-202ENST00000503427 ERC1Q8IUD2 1116 aa19.42■□□□□ 0.7
HMGXB3-202ENST00000503427 WWC1Q8IX03 1113 aa19.42■□□□□ 0.7
HMGXB3-202ENST00000503427 IFT57Q9NWB7 429 aa19.42■□□□□ 0.7
HMGXB3-202ENST00000503427 PLCH2O75038 1416 aa19.42■□□□□ 0.7
HMGXB3-202ENST00000503427 SCAF11Q99590 1463 aaKnown RBP19.42■□□□□ 0.7
HMGXB3-202ENST00000503427 ZNF771Q7L3S4 317 aaPredicted RBP19.41■□□□□ 0.7
HMGXB3-202ENST00000503427 NFE2L2Q16236 605 aa19.41■□□□□ 0.7
HMGXB3-202ENST00000503427 RALYLQ86SE5 291 aaKnown RBP19.41■□□□□ 0.7
HMGXB3-202ENST00000503427 SAFBQ15424 915 aaKnown RBP eCLIP19.41■□□□□ 0.7
HMGXB3-202ENST00000503427 ERICH2A1L162 156 aa19.4■□□□□ 0.7
HMGXB3-202ENST00000503427 STRN4Q9NRL3 753 aa19.4■□□□□ 0.7
HMGXB3-202ENST00000503427 MVPQ14764 893 aaKnown RBP19.4■□□□□ 0.7
HMGXB3-202ENST00000503427 KIF6Q6ZMV9 814 aa19.4■□□□□ 0.7
HMGXB3-202ENST00000503427 WAPLQ7Z5K2 1190 aa19.4■□□□□ 0.7
HMGXB3-202ENST00000503427 TOM1L2Q6ZVM7 507 aa19.4■□□□□ 0.7
HMGXB3-202ENST00000503427 NAT10Q9H0A0 1025 aaKnown RBP19.4■□□□□ 0.7
HMGXB3-202ENST00000503427 RNF214Q8ND24 703 aa19.39■□□□□ 0.69
HMGXB3-202ENST00000503427 NUP153P49790 1475 aaKnown RBP19.39■□□□□ 0.69
HMGXB3-202ENST00000503427 TMPOP42166 694 aaKnown RBP19.39■□□□□ 0.69
HMGXB3-202ENST00000503427 CWC22Q9HCG8 908 aaKnown RBP19.39■□□□□ 0.69
HMGXB3-202ENST00000503427 CABP4P57796 275 aa19.39■□□□□ 0.69
HMGXB3-202ENST00000503427 ITSN2Q9NZM3 1697 aa19.39■□□□□ 0.69
HMGXB3-202ENST00000503427 PDCP20941 246 aa19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 TEX35Q5T0J7 233 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms