RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 NGDNQ8NEJ9 315 aaKnown RBP13.23□□□□□ -0.29
SFXN1-204ENST00000502865 ORAI2Q96SN7 254 aa13.23□□□□□ -0.29
SFXN1-204ENST00000502865 MRS2Q9HD23 443 aa13.23□□□□□ -0.29
SFXN1-204ENST00000502865 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
SFXN1-204ENST00000502865 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
SFXN1-204ENST00000502865 USP6P35125 1406 aa13.22□□□□□ -0.29
SFXN1-204ENST00000502865 MST1RQ04912 1400 aa13.22□□□□□ -0.29
SFXN1-204ENST00000502865 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
SFXN1-204ENST00000502865 ATF3P18847 181 aa13.22□□□□□ -0.29
SFXN1-204ENST00000502865 ESCO1Q5FWF5 840 aa13.22□□□□□ -0.29
SFXN1-204ENST00000502865 MORC1Q86VD1 984 aa13.22□□□□□ -0.29
SFXN1-204ENST00000502865 NME9Q86XW9 330 aa13.22□□□□□ -0.29
SFXN1-204ENST00000502865 DCCP43146 1447 aa13.22□□□□□ -0.29
SFXN1-204ENST00000502865 NSD2O96028 1365 aa13.21□□□□□ -0.29
SFXN1-204ENST00000502865 MSH6P52701 1360 aa13.21□□□□□ -0.29
SFXN1-204ENST00000502865 LTBP4Q8N2S1 1624 aa13.21□□□□□ -0.29
SFXN1-204ENST00000502865 BRD4O60885 1362 aaPredicted RBP13.2□□□□□ -0.3
SFXN1-204ENST00000502865 TNNT2P45379 298 aaPredicted RBP13.2□□□□□ -0.3
SFXN1-204ENST00000502865 NLRP13Q86W25 1043 aa13.2□□□□□ -0.3
SFXN1-204ENST00000502865 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
SFXN1-204ENST00000502865 YTHDC1Q96MU7 727 aaKnown RBP13.19□□□□□ -0.3
SFXN1-204ENST00000502865 PNISRQ8TF01 805 aaKnown RBP13.17□□□□□ -0.3
SFXN1-204ENST00000502865 PIK3C2AO00443 1686 aa13.16□□□□□ -0.3
SFXN1-204ENST00000502865 KIF1AQ12756 1690 aa13.16□□□□□ -0.3
SFXN1-204ENST00000502865 FOXO3O43524 673 aa13.16□□□□□ -0.3
SFXN1-204ENST00000502865 FBLN1P23142 703 aa13.16□□□□□ -0.3
SFXN1-204ENST00000502865 FAM9BQ8IZU0 186 aa13.16□□□□□ -0.3
SFXN1-204ENST00000502865 TTC21AQ8NDW8 1320 aa13.15□□□□□ -0.3
SFXN1-204ENST00000502865 XPCQ01831 940 aaPredicted RBP13.15□□□□□ -0.3
SFXN1-204ENST00000502865 PSME1Q06323 249 aa13.15□□□□□ -0.3
SFXN1-204ENST00000502865 DDX17Q92841 729 aaKnown RBP13.15□□□□□ -0.3
SFXN1-204ENST00000502865 OVOS2A0A0J9YW53 1432 aa13.14□□□□□ -0.31
SFXN1-204ENST00000502865 OVOS2Q6IE36 1432 aa13.14□□□□□ -0.31
SFXN1-204ENST00000502865 MARF1Q9Y4F3 1742 aaKnown RBP13.14□□□□□ -0.31
SFXN1-204ENST00000502865 COG3Q96JB2 828 aa13.14□□□□□ -0.31
SFXN1-204ENST00000502865 SLAIN2Q9P270 581 aa13.14□□□□□ -0.31
SFXN1-204ENST00000502865 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
SFXN1-204ENST00000502865 USP31Q70CQ4 1352 aa13.13□□□□□ -0.31
SFXN1-204ENST00000502865 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
SFXN1-204ENST00000502865 MTHFSP49914 203 aa13.13□□□□□ -0.31
SFXN1-204ENST00000502865 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
SFXN1-204ENST00000502865 KRT28Q7Z3Y7 464 aa13.13□□□□□ -0.31
SFXN1-204ENST00000502865 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
SFXN1-204ENST00000502865 NUTM2GQ5VZR2 741 aa13.12□□□□□ -0.31
SFXN1-204ENST00000502865 BRINP3Q76B58 766 aa13.12□□□□□ -0.31
SFXN1-204ENST00000502865 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
SFXN1-204ENST00000502865 USP54Q70EL1 1684 aa13.12□□□□□ -0.31
SFXN1-204ENST00000502865 ABTB2Q8N961 1025 aa13.11□□□□□ -0.31
SFXN1-204ENST00000502865 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
SFXN1-204ENST00000502865 NLRP6P59044 892 aa13.1□□□□□ -0.31
SFXN1-204ENST00000502865 AATKQ6ZMQ8 1374 aa13.09□□□□□ -0.31
SFXN1-204ENST00000502865 SHPRHQ149N8 1683 aa13.09□□□□□ -0.31
SFXN1-204ENST00000502865 EMILIN1Q9Y6C2 1016 aa13.09□□□□□ -0.31
SFXN1-204ENST00000502865 PXDNQ92626 1479 aa13.09□□□□□ -0.31
SFXN1-204ENST00000502865 ALS2Q96Q42 1657 aa13.08□□□□□ -0.31
SFXN1-204ENST00000502865 RRS1Q15050 365 aaKnown RBP13.08□□□□□ -0.32
SFXN1-204ENST00000502865 COL3A1P02461 1466 aaPredicted RBP13.08□□□□□ -0.32
SFXN1-204ENST00000502865 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
SFXN1-204ENST00000502865 SOX12O15370 315 aa13.07□□□□□ -0.32
SFXN1-204ENST00000502865 ADAMTS8Q9UP79 889 aa13.07□□□□□ -0.32
SFXN1-204ENST00000502865 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
SFXN1-204ENST00000502865 PEAK1Q9H792 1746 aa13.06□□□□□ -0.32
SFXN1-204ENST00000502865 CFAP53Q96M91 514 aa13.06□□□□□ -0.32
SFXN1-204ENST00000502865 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
SFXN1-204ENST00000502865 NHSL1Q5SYE7 1610 aa13.06□□□□□ -0.32
SFXN1-204ENST00000502865 PNPLA6Q8IY17 1366 aa13.06□□□□□ -0.32
SFXN1-204ENST00000502865 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
SFXN1-204ENST00000502865 PPM1GO15355 546 aaPredicted RBP13.05□□□□□ -0.32
SFXN1-204ENST00000502865 LMOD2Q6P5Q4 547 aa13.05□□□□□ -0.32
SFXN1-204ENST00000502865 INSRP06213 1382 aa13.05□□□□□ -0.32
SFXN1-204ENST00000502865 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
SFXN1-204ENST00000502865 WDR43Q15061 677 aaKnown RBP eCLIP13.04□□□□□ -0.32
SFXN1-204ENST00000502865 ROBO1Q9Y6N7 1651 aa13.04□□□□□ -0.32
SFXN1-204ENST00000502865 SOS2Q07890 1332 aaPredicted RBP13.04□□□□□ -0.32
SFXN1-204ENST00000502865 SPATA31A3Q5VYP0 1347 aa13.04□□□□□ -0.32
SFXN1-204ENST00000502865 MED1Q15648 1581 aaPredicted RBP13.03□□□□□ -0.32
SFXN1-204ENST00000502865 PLEKHG5O94827 1062 aa13.03□□□□□ -0.32
SFXN1-204ENST00000502865 MAP3K19Q56UN5 1328 aa13.03□□□□□ -0.32
SFXN1-204ENST00000502865 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
SFXN1-204ENST00000502865 TNS3Q68CZ2 1445 aa13.03□□□□□ -0.32
SFXN1-204ENST00000502865 CDK12Q9NYV4 1490 aaPredicted RBP13.03□□□□□ -0.32
SFXN1-204ENST00000502865 SLIT3O75094 1523 aa13.03□□□□□ -0.32
SFXN1-204ENST00000502865 NFAT5O94916 1531 aa13.03□□□□□ -0.32
SFXN1-204ENST00000502865 DIAPH1O60610 1272 aaKnown RBP13.02□□□□□ -0.33
SFXN1-204ENST00000502865 USP19O94966 1318 aa13.02□□□□□ -0.33
SFXN1-204ENST00000502865 LTN1O94822 1766 aa13.02□□□□□ -0.33
SFXN1-204ENST00000502865 IL13P35225 146 aa13.01□□□□□ -0.33
SFXN1-204ENST00000502865 HSP90AB2PQ58FF8 381 aa13.01□□□□□ -0.33
SFXN1-204ENST00000502865 CRYBG1Q9Y4K1 1723 aa13.01□□□□□ -0.33
SFXN1-204ENST00000502865 GCP02774 474 aa13□□□□□ -0.33
SFXN1-204ENST00000502865 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
SFXN1-204ENST00000502865 KCNH5Q8NCM2 988 aa13□□□□□ -0.33
SFXN1-204ENST00000502865 CABLES1Q8TDN4 633 aa13□□□□□ -0.33
SFXN1-204ENST00000502865 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
SFXN1-204ENST00000502865 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
SFXN1-204ENST00000502865 TOM1O60784 492 aa12.98□□□□□ -0.33
SFXN1-204ENST00000502865 U2AF1L5P0DN76 240 aaPredicted RBP12.98□□□□□ -0.33
SFXN1-204ENST00000502865 HOXC9P31274 260 aa12.98□□□□□ -0.33
SFXN1-204ENST00000502865 AMPHP49418 695 aa12.98□□□□□ -0.33
SFXN1-204ENST00000502865 U2AF1Q01081 240 aaKnown RBP eCLIP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms