RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 RALGAPBQ86X10 1494 aa12.99□□□□□ -0.33
COPB2-202ENST00000502734 PLEKHG3A1L390 1219 aa12.99□□□□□ -0.33
COPB2-202ENST00000502734 USP32Q8NFA0 1604 aa12.99□□□□□ -0.33
COPB2-202ENST00000502734 ACEP12821 1306 aa12.98□□□□□ -0.33
COPB2-202ENST00000502734 NEUROD1Q13562 356 aa12.98□□□□□ -0.33
COPB2-202ENST00000502734 MARF1Q9Y4F3 1742 aaKnown RBP12.97□□□□□ -0.33
COPB2-202ENST00000502734 CENPJQ9HC77 1338 aaPredicted RBP12.97□□□□□ -0.33
COPB2-202ENST00000502734 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
COPB2-202ENST00000502734 KRT27Q7Z3Y8 459 aa12.96□□□□□ -0.33
COPB2-202ENST00000502734 PRDM11Q9NQV5 511 aa12.96□□□□□ -0.33
COPB2-202ENST00000502734 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
COPB2-202ENST00000502734 CABP2Q9NPB3 220 aa12.95□□□□□ -0.34
COPB2-202ENST00000502734 ZRANB1Q9UGI0 708 aa12.95□□□□□ -0.34
COPB2-202ENST00000502734 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
COPB2-202ENST00000502734 ATP7BP35670 1465 aa12.94□□□□□ -0.34
COPB2-202ENST00000502734 A0A0G2JS52 829 aa12.94□□□□□ -0.34
COPB2-202ENST00000502734 MYT1Q01538 1121 aa12.94□□□□□ -0.34
COPB2-202ENST00000502734 FAM98CQ17RN3 349 aaKnown RBP12.94□□□□□ -0.34
COPB2-202ENST00000502734 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
COPB2-202ENST00000502734 EP400Q96L91 3159 aa12.94□□□□□ -0.34
COPB2-202ENST00000502734 GLI3P10071 1580 aa12.94□□□□□ -0.34
COPB2-202ENST00000502734 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
COPB2-202ENST00000502734 SF3B2Q13435 895 aaKnown RBP12.93□□□□□ -0.34
COPB2-202ENST00000502734 CABP1Q9NZU7 370 aa12.93□□□□□ -0.34
COPB2-202ENST00000502734 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.93□□□□□ -0.34
COPB2-202ENST00000502734 SPATA31A5Q5VU36 1347 aa12.92□□□□□ -0.34
COPB2-202ENST00000502734 SPATA31A7Q8IWB4 1347 aa12.92□□□□□ -0.34
COPB2-202ENST00000502734 CHRNA2Q15822 529 aa12.92□□□□□ -0.34
COPB2-202ENST00000502734 NLRP13Q86W25 1043 aa12.92□□□□□ -0.34
COPB2-202ENST00000502734 ARHGEF28Q8N1W1 1705 aaKnown RBP12.92□□□□□ -0.34
COPB2-202ENST00000502734 KIAA1210Q9ULL0 1709 aa12.92□□□□□ -0.34
COPB2-202ENST00000502734 TRPM3Q9HCF6 1732 aaPredicted RBP12.91□□□□□ -0.34
COPB2-202ENST00000502734 EVA1CP58658 441 aa12.91□□□□□ -0.34
COPB2-202ENST00000502734 STRN4Q9NRL3 753 aa12.91□□□□□ -0.34
COPB2-202ENST00000502734 KIAA0232Q92628 1395 aa12.91□□□□□ -0.34
COPB2-202ENST00000502734 BLMP54132 1417 aaPredicted RBP12.9□□□□□ -0.34
COPB2-202ENST00000502734 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
COPB2-202ENST00000502734 EVC2Q86UK5 1308 aa12.89□□□□□ -0.35
COPB2-202ENST00000502734 NWD2Q9ULI1 1742 aa12.89□□□□□ -0.35
COPB2-202ENST00000502734 GCP02774 474 aa12.89□□□□□ -0.35
COPB2-202ENST00000502734 DEFB132Q7Z7B7 95 aa12.89□□□□□ -0.35
COPB2-202ENST00000502734 PPIP5K1Q6PFW1 1433 aa12.88□□□□□ -0.35
COPB2-202ENST00000502734 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
COPB2-202ENST00000502734 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
COPB2-202ENST00000502734 BRD4O60885 1362 aaPredicted RBP12.88□□□□□ -0.35
COPB2-202ENST00000502734 ROCK2O75116 1388 aaKnown RBP12.88□□□□□ -0.35
COPB2-202ENST00000502734 SPATA31A1Q5TZJ5 1347 aa12.88□□□□□ -0.35
COPB2-202ENST00000502734 NLRP6P59044 892 aa12.87□□□□□ -0.35
COPB2-202ENST00000502734 COL14A1Q05707 1796 aaKnown RBP12.86□□□□□ -0.35
COPB2-202ENST00000502734 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
COPB2-202ENST00000502734 ITSN1Q15811 1721 aa12.86□□□□□ -0.35
COPB2-202ENST00000502734 FAM182BQ5T319 152 aa12.86□□□□□ -0.35
COPB2-202ENST00000502734 USP35Q9P2H5 1018 aa12.86□□□□□ -0.35
COPB2-202ENST00000502734 USP19O94966 1318 aa12.86□□□□□ -0.35
COPB2-202ENST00000502734 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
COPB2-202ENST00000502734 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
COPB2-202ENST00000502734 BAG6P46379 1132 aa12.85□□□□□ -0.35
COPB2-202ENST00000502734 CPDO75976 1380 aa12.84□□□□□ -0.35
COPB2-202ENST00000502734 BRWD3Q6RI45 1802 aa12.84□□□□□ -0.35
COPB2-202ENST00000502734 LARP1Q6PKG0 1096 aaKnown RBP12.84□□□□□ -0.35
COPB2-202ENST00000502734 BARGINQ6ZT62 677 aa12.84□□□□□ -0.35
COPB2-202ENST00000502734 CARD11Q9BXL7 1154 aa12.84□□□□□ -0.35
COPB2-202ENST00000502734 PDE3BQ13370 1112 aa12.83□□□□□ -0.36
COPB2-202ENST00000502734 FAM196AQ6ZSG2 479 aa12.83□□□□□ -0.36
COPB2-202ENST00000502734 TCP11L2Q8N4U5 519 aa12.83□□□□□ -0.36
COPB2-202ENST00000502734 ZBTB7CA1YPR0 619 aa12.82□□□□□ -0.36
COPB2-202ENST00000502734 EN1Q05925 392 aaPredicted RBP12.82□□□□□ -0.36
COPB2-202ENST00000502734 THRAP3Q9Y2W1 955 aaKnown RBP12.82□□□□□ -0.36
COPB2-202ENST00000502734 TTC21BQ7Z4L5 1316 aa12.82□□□□□ -0.36
COPB2-202ENST00000502734 USP6P35125 1406 aa12.81□□□□□ -0.36
COPB2-202ENST00000502734 TRIM26Q12899 539 aaPredicted RBP12.81□□□□□ -0.36
COPB2-202ENST00000502734 NRAPQ86VF7 1730 aa12.81□□□□□ -0.36
COPB2-202ENST00000502734 SSH2Q76I76 1423 aa12.8□□□□□ -0.36
COPB2-202ENST00000502734 TOPAZ1Q8N9V7 1692 aa12.8□□□□□ -0.36
COPB2-202ENST00000502734 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
COPB2-202ENST00000502734 TONSLQ96HA7 1378 aa12.8□□□□□ -0.36
COPB2-202ENST00000502734 CAMTA1Q9Y6Y1 1673 aa12.8□□□□□ -0.36
COPB2-202ENST00000502734 CRYBG1Q9Y4K1 1723 aa12.79□□□□□ -0.36
COPB2-202ENST00000502734 TRIM37O94972 964 aa12.79□□□□□ -0.36
COPB2-202ENST00000502734 AATKQ6ZMQ8 1374 aa12.79□□□□□ -0.36
COPB2-202ENST00000502734 TRPM1Q7Z4N2 1603 aa12.78□□□□□ -0.36
COPB2-202ENST00000502734 ARHGEF25Q86VW2 580 aa12.78□□□□□ -0.36
COPB2-202ENST00000502734 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
COPB2-202ENST00000502734 TTC21AQ8NDW8 1320 aa12.78□□□□□ -0.36
COPB2-202ENST00000502734 QRICH2Q9H0J4 1663 aa12.77□□□□□ -0.36
COPB2-202ENST00000502734 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
COPB2-202ENST00000502734 APBA3O96018 575 aa12.77□□□□□ -0.37
COPB2-202ENST00000502734 TOM1L2Q6ZVM7 507 aa12.77□□□□□ -0.37
COPB2-202ENST00000502734 TMC1Q8TDI8 760 aa12.77□□□□□ -0.37
COPB2-202ENST00000502734 KTN1Q86UP2 1357 aaKnown RBP12.77□□□□□ -0.37
COPB2-202ENST00000502734 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.37
COPB2-202ENST00000502734 C11orf95C9JLR9 678 aaPredicted RBP12.76□□□□□ -0.37
COPB2-202ENST00000502734 SOX12O15370 315 aa12.76□□□□□ -0.37
COPB2-202ENST00000502734 EZH2Q15910 746 aaKnown RBP12.76□□□□□ -0.37
COPB2-202ENST00000502734 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.76□□□□□ -0.37
COPB2-202ENST00000502734 PUS7Q96PZ0 661 aaKnown RBP12.76□□□□□ -0.37
COPB2-202ENST00000502734 CAMKK2Q96RR4 588 aa12.76□□□□□ -0.37
COPB2-202ENST00000502734 SLC12A5Q9H2X9 1139 aa12.76□□□□□ -0.37
COPB2-202ENST00000502734 CPSF1Q10570 1443 aaKnown RBP12.76□□□□□ -0.37
COPB2-202ENST00000502734 PSDA5PKW4 1024 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms