RNA–Protein interactions for RNA: ENST00000502664.5

GYPB-202, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-202ENST00000502664 KLHL34Q8N239 644 aa8.06□□□□□ -1.12
GYPB-202ENST00000502664 SLC52A1Q9NWF4 448 aa8.06□□□□□ -1.12
GYPB-202ENST00000502664 FBXO3Q9UK99 471 aa8.06□□□□□ -1.12
GYPB-202ENST00000502664 ASXL1Q8IXJ9 1541 aa8.06□□□□□ -1.12
GYPB-202ENST00000502664 PTPN23Q9H3S7 1636 aa8.06□□□□□ -1.12
GYPB-202ENST00000502664 SETD5Q9C0A6 1442 aa8.05□□□□□ -1.12
GYPB-202ENST00000502664 NCOA3Q9Y6Q9 1424 aa8.05□□□□□ -1.12
GYPB-202ENST00000502664 PPP1R15AO75807 674 aaPredicted RBP8.05□□□□□ -1.12
GYPB-202ENST00000502664 CHGAP10645 457 aaKnown RBP8.05□□□□□ -1.12
GYPB-202ENST00000502664 RBM6P78332 1123 aaKnown RBP8.05□□□□□ -1.12
GYPB-202ENST00000502664 AMOTL2Q9Y2J4 779 aa8.05□□□□□ -1.12
GYPB-202ENST00000502664 MST1RQ04912 1400 aa8.04□□□□□ -1.12
GYPB-202ENST00000502664 VPS8Q8N3P4 1428 aa8.04□□□□□ -1.12
GYPB-202ENST00000502664 NHSL1Q5SYE7 1610 aa8.04□□□□□ -1.12
GYPB-202ENST00000502664 ADAMTS2O95450 1211 aa8.04□□□□□ -1.12
GYPB-202ENST00000502664 PNPLA6Q8IY17 1366 aa8.04□□□□□ -1.12
GYPB-202ENST00000502664 LOC105371045A0A1W2PR82 267 aa8.03□□□□□ -1.12
GYPB-202ENST00000502664 ZNF687Q8N1G0 1237 aa8.03□□□□□ -1.12
GYPB-202ENST00000502664 ANKRD30AQ9BXX3 1397 aa8.02□□□□□ -1.13
GYPB-202ENST00000502664 RIMBP2O15034 1052 aa8.02□□□□□ -1.13
GYPB-202ENST00000502664 TRPM2O94759 1503 aa8.02□□□□□ -1.13
GYPB-202ENST00000502664 NRXN3Q9Y4C0 1643 aa8.01□□□□□ -1.13
GYPB-202ENST00000502664 LRRC59Q96AG4 307 aaKnown RBP8.01□□□□□ -1.13
GYPB-202ENST00000502664 NGLY1Q96IV0 654 aa8.01□□□□□ -1.13
GYPB-202ENST00000502664 UNC13BO14795 1591 aa8.01□□□□□ -1.13
GYPB-202ENST00000502664 XRN1Q8IZH2 1706 aaKnown RBP8□□□□□ -1.13
GYPB-202ENST00000502664 RPRD2Q5VT52 1461 aaKnown RBP8□□□□□ -1.13
GYPB-202ENST00000502664 METP08581 1390 aa8□□□□□ -1.13
GYPB-202ENST00000502664 ATAD2Q6PL18 1390 aa8□□□□□ -1.13
GYPB-202ENST00000502664 E9PCH4 1651 aa8□□□□□ -1.13
GYPB-202ENST00000502664 VASPP50552 380 aaPredicted RBP8□□□□□ -1.13
GYPB-202ENST00000502664 USP21Q9UK80 565 aa8□□□□□ -1.13
GYPB-202ENST00000502664 EP400Q96L91 3159 aa8□□□□□ -1.13
GYPB-202ENST00000502664 PIK3R4Q99570 1358 aa7.99□□□□□ -1.13
GYPB-202ENST00000502664 DCCP43146 1447 aa7.99□□□□□ -1.13
GYPB-202ENST00000502664 HDGFP51858 240 aaKnown RBP7.99□□□□□ -1.13
GYPB-202ENST00000502664 NALCNQ8IZF0 1738 aa7.99□□□□□ -1.13
GYPB-202ENST00000502664 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.99□□□□□ -1.13
GYPB-202ENST00000502664 ZSWIM6Q9HCJ5 1215 aa7.99□□□□□ -1.13
GYPB-202ENST00000502664 ADGRL2O95490 1459 aa7.99□□□□□ -1.13
GYPB-202ENST00000502664 ATRNO75882 1429 aa7.98□□□□□ -1.13
GYPB-202ENST00000502664 ANKRD50Q9ULJ7 1429 aa7.98□□□□□ -1.13
GYPB-202ENST00000502664 PTGER2P43116 358 aa7.98□□□□□ -1.13
GYPB-202ENST00000502664 GPR153Q6NV75 609 aa7.98□□□□□ -1.13
GYPB-202ENST00000502664 TMEM92Q6UXU6 159 aa7.98□□□□□ -1.13
GYPB-202ENST00000502664 ORAI2Q96SN7 254 aa7.98□□□□□ -1.13
GYPB-202ENST00000502664 DEFB132Q7Z7B7 95 aa7.97□□□□□ -1.13
GYPB-202ENST00000502664 FNBP4Q8N3X1 1017 aaPredicted RBP7.97□□□□□ -1.13
GYPB-202ENST00000502664 ADGRL3Q9HAR2 1447 aa7.96□□□□□ -1.13
GYPB-202ENST00000502664 C1orf167Q5SNV9 1468 aa7.96□□□□□ -1.13
GYPB-202ENST00000502664 BCL9LQ86UU0 1499 aa7.96□□□□□ -1.13
GYPB-202ENST00000502664 TRPC5Q9UL62 973 aaPredicted RBP7.96□□□□□ -1.14
GYPB-202ENST00000502664 SOS2Q07890 1332 aaPredicted RBP7.96□□□□□ -1.14
GYPB-202ENST00000502664 FAM50AQ14320 339 aaKnown RBP7.95□□□□□ -1.14
GYPB-202ENST00000502664 LAMC1P11047 1609 aa7.94□□□□□ -1.14
GYPB-202ENST00000502664 ANKRD13DQ6ZTN6 518 aa7.94□□□□□ -1.14
GYPB-202ENST00000502664 EFCAB3Q8N7B9 438 aa7.94□□□□□ -1.14
GYPB-202ENST00000502664 XPCQ01831 940 aaPredicted RBP7.93□□□□□ -1.14
GYPB-202ENST00000502664 MICALL2Q8IY33 904 aa7.93□□□□□ -1.14
GYPB-202ENST00000502664 ROBO2Q9HCK4 1378 aa7.93□□□□□ -1.14
GYPB-202ENST00000502664 PTCH1Q13635 1447 aa7.93□□□□□ -1.14
GYPB-202ENST00000502664 MYOM2P54296 1465 aa7.93□□□□□ -1.14
GYPB-202ENST00000502664 GLI3P10071 1580 aa7.93□□□□□ -1.14
GYPB-202ENST00000502664 GJD4Q96KN9 370 aaPredicted RBP7.92□□□□□ -1.14
GYPB-202ENST00000502664 IQGAP3Q86VI3 1631 aa7.92□□□□□ -1.14
GYPB-202ENST00000502664 COL22A1Q8NFW1 1626 aaPredicted RBP7.92□□□□□ -1.14
GYPB-202ENST00000502664 PSDA5PKW4 1024 aaPredicted RBP7.91□□□□□ -1.14
GYPB-202ENST00000502664 ZNF326Q5BKZ1 582 aaKnown RBP7.91□□□□□ -1.14
GYPB-202ENST00000502664 CIZ1Q9ULV3 898 aaPredicted RBP7.91□□□□□ -1.14
GYPB-202ENST00000502664 BRWD3Q6RI45 1802 aa7.91□□□□□ -1.14
GYPB-202ENST00000502664 NEXMIFQ5QGS0 1516 aa7.9□□□□□ -1.14
GYPB-202ENST00000502664 RALGAPBQ86X10 1494 aa7.9□□□□□ -1.14
GYPB-202ENST00000502664 PXDNQ92626 1479 aa7.9□□□□□ -1.14
GYPB-202ENST00000502664 BLMP54132 1417 aaPredicted RBP7.9□□□□□ -1.14
GYPB-202ENST00000502664 NUP155O75694 1391 aa7.9□□□□□ -1.14
GYPB-202ENST00000502664 ARSIQ5FYB1 569 aa7.9□□□□□ -1.14
GYPB-202ENST00000502664 CCDC125Q86Z20 511 aa7.9□□□□□ -1.14
GYPB-202ENST00000502664 MARF1Q9Y4F3 1742 aaKnown RBP7.89□□□□□ -1.15
GYPB-202ENST00000502664 LRP5O75197 1615 aa7.89□□□□□ -1.15
GYPB-202ENST00000502664 CLTCL1P53675 1640 aa7.89□□□□□ -1.15
GYPB-202ENST00000502664 NUTM2FA1L443 756 aa7.88□□□□□ -1.15
GYPB-202ENST00000502664 FOXO3O43524 673 aa7.88□□□□□ -1.15
GYPB-202ENST00000502664 LSM11P83369 360 aaKnown RBP eCLIP7.88□□□□□ -1.15
GYPB-202ENST00000502664 ESCO1Q5FWF5 840 aa7.88□□□□□ -1.15
GYPB-202ENST00000502664 SPOCK2Q92563 424 aa7.88□□□□□ -1.15
GYPB-202ENST00000502664 SPHKAPQ2M3C7 1700 aa7.88□□□□□ -1.15
GYPB-202ENST00000502664 SLIT2O94813 1529 aa7.88□□□□□ -1.15
GYPB-202ENST00000502664 ZNF316A6NFI3 1004 aaPredicted RBP7.87□□□□□ -1.15
GYPB-202ENST00000502664 HRCP23327 699 aa7.87□□□□□ -1.15
GYPB-202ENST00000502664 UNC5CLQ8IV45 518 aa7.87□□□□□ -1.15
GYPB-202ENST00000502664 SEPT12Q8IYM1 358 aa7.87□□□□□ -1.15
GYPB-202ENST00000502664 KHSRPQ92945 711 aaKnown RBP eCLIP7.87□□□□□ -1.153e-6■■■□□ 17.7
GYPB-202ENST00000502664 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.86□□□□□ -1.15
GYPB-202ENST00000502664 NPHP3Q7Z494 1330 aa7.85□□□□□ -1.15
GYPB-202ENST00000502664 ITGAEP38570 1179 aa7.85□□□□□ -1.15
GYPB-202ENST00000502664 FAM182BQ5T319 152 aa7.85□□□□□ -1.15
GYPB-202ENST00000502664 IFNLR1Q8IU57 520 aaPredicted RBP7.85□□□□□ -1.15
GYPB-202ENST00000502664 CABLES1Q8TDN4 633 aa7.85□□□□□ -1.15
GYPB-202ENST00000502664 MS4A4AQ96JQ5 239 aa7.85□□□□□ -1.15
GYPB-202ENST00000502664 PLA2G2EQ9NZK7 142 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms