RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 SPATA31A3Q5VYP0 1347 aa16.36■□□□□ 0.21
UBE2D3-211ENST00000502404 GJD4Q96KN9 370 aaPredicted RBP16.35■□□□□ 0.21
UBE2D3-211ENST00000502404 KNDC1Q76NI1 1749 aa16.34■□□□□ 0.21
UBE2D3-211ENST00000502404 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
UBE2D3-211ENST00000502404 IFT172Q9UG01 1749 aa16.33■□□□□ 0.21
UBE2D3-211ENST00000502404 UNC5CLQ8IV45 518 aa16.33■□□□□ 0.2
UBE2D3-211ENST00000502404 PRAM1Q96QH2 718 aa16.33■□□□□ 0.2
UBE2D3-211ENST00000502404 BCL9LQ86UU0 1499 aa16.32■□□□□ 0.2
UBE2D3-211ENST00000502404 KIF1AQ12756 1690 aa16.31■□□□□ 0.2
UBE2D3-211ENST00000502404 NRXN1Q9ULB1 1477 aa16.31■□□□□ 0.2
UBE2D3-211ENST00000502404 SAFB2Q14151 953 aaKnown RBP eCLIP16.31■□□□□ 0.2
UBE2D3-211ENST00000502404 LMOD2Q6P5Q4 547 aa16.31■□□□□ 0.2
UBE2D3-211ENST00000502404 RAB3GAP2Q9H2M9 1393 aa16.3■□□□□ 0.2
UBE2D3-211ENST00000502404 FMN2Q9NZ56 1722 aa16.3■□□□□ 0.2
UBE2D3-211ENST00000502404 SBNO1A3KN83 1393 aa16.29■□□□□ 0.2
UBE2D3-211ENST00000502404 ARHGEF10O15013 1369 aa16.29■□□□□ 0.2
UBE2D3-211ENST00000502404 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
UBE2D3-211ENST00000502404 EIF3AQ14152 1382 aaKnown RBP16.28■□□□□ 0.2
UBE2D3-211ENST00000502404 CHADLQ6NUI6 762 aa16.28■□□□□ 0.2
UBE2D3-211ENST00000502404 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
UBE2D3-211ENST00000502404 HRCP23327 699 aa16.27■□□□□ 0.2
UBE2D3-211ENST00000502404 PIP4P2Q8N4L2 257 aa16.27■□□□□ 0.2
UBE2D3-211ENST00000502404 TRAK1Q9UPV9 953 aa16.27■□□□□ 0.2
UBE2D3-211ENST00000502404 KDM2AQ9Y2K7 1162 aa16.27■□□□□ 0.2
UBE2D3-211ENST00000502404 ANKARQ7Z5J8 1434 aa16.27■□□□□ 0.19
UBE2D3-211ENST00000502404 DLC1Q96QB1 1528 aa16.26■□□□□ 0.19
UBE2D3-211ENST00000502404 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
UBE2D3-211ENST00000502404 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
UBE2D3-211ENST00000502404 CCDC9Q9Y3X0 531 aaKnown RBP16.26■□□□□ 0.19
UBE2D3-211ENST00000502404 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
UBE2D3-211ENST00000502404 MARF1Q9Y4F3 1742 aaKnown RBP16.25■□□□□ 0.19
UBE2D3-211ENST00000502404 SLIT2O94813 1529 aa16.25■□□□□ 0.19
UBE2D3-211ENST00000502404 VPS72Q15906 364 aa16.25■□□□□ 0.19
UBE2D3-211ENST00000502404 PMFBP1Q8TBY8 1022 aa16.25■□□□□ 0.19
UBE2D3-211ENST00000502404 SF3B2Q13435 895 aaKnown RBP16.24■□□□□ 0.19
UBE2D3-211ENST00000502404 CABLES1Q8TDN4 633 aa16.24■□□□□ 0.19
UBE2D3-211ENST00000502404 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
UBE2D3-211ENST00000502404 WASLO00401 505 aaPredicted RBP16.22■□□□□ 0.19
UBE2D3-211ENST00000502404 NUBP1P53384 320 aa16.22■□□□□ 0.19
UBE2D3-211ENST00000502404 HIRIP3Q9BW71 556 aaPredicted RBP16.22■□□□□ 0.19
UBE2D3-211ENST00000502404 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.22■□□□□ 0.19
UBE2D3-211ENST00000502404 MINK1Q8N4C8 1332 aaPredicted RBP16.21■□□□□ 0.19
UBE2D3-211ENST00000502404 USP32Q8NFA0 1604 aa16.21■□□□□ 0.19
UBE2D3-211ENST00000502404 SEPT12Q8IYM1 358 aa16.21■□□□□ 0.19
UBE2D3-211ENST00000502404 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
UBE2D3-211ENST00000502404 ONECUT3O60422 494 aaPredicted RBP16.2■□□□□ 0.18
UBE2D3-211ENST00000502404 BLMP54132 1417 aaPredicted RBP16.19■□□□□ 0.18
UBE2D3-211ENST00000502404 FAM83GA6ND36 823 aa16.19■□□□□ 0.18
UBE2D3-211ENST00000502404 FARP1Q9Y4F1 1045 aaPredicted RBP16.19■□□□□ 0.18
UBE2D3-211ENST00000502404 A0A0G2JS52 829 aa16.18■□□□□ 0.18
UBE2D3-211ENST00000502404 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-211ENST00000502404 MYT1Q01538 1121 aa16.18■□□□□ 0.18
UBE2D3-211ENST00000502404 KRT27Q7Z3Y8 459 aa16.18■□□□□ 0.18
UBE2D3-211ENST00000502404 RGPD8O14715 1765 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-211ENST00000502404 ADGRB1O14514 1584 aa16.17■□□□□ 0.18
UBE2D3-211ENST00000502404 ADGRB2O60241 1585 aa16.17■□□□□ 0.18
UBE2D3-211ENST00000502404 BTG4Q9NY30 223 aa16.16■□□□□ 0.18
UBE2D3-211ENST00000502404 GLI3P10071 1580 aa16.16■□□□□ 0.18
UBE2D3-211ENST00000502404 TULP4Q9NRJ4 1543 aa16.15■□□□□ 0.18
UBE2D3-211ENST00000502404 NWD2Q9ULI1 1742 aa16.15■□□□□ 0.18
UBE2D3-211ENST00000502404 NUDT16Q96DE0 195 aaKnown RBP16.14■□□□□ 0.17
UBE2D3-211ENST00000502404 PRR36Q9H6K5 1346 aa16.14■□□□□ 0.17
UBE2D3-211ENST00000502404 PRDM11Q9NQV5 511 aa16.13■□□□□ 0.17
UBE2D3-211ENST00000502404 BAG6P46379 1132 aa16.12■□□□□ 0.17
UBE2D3-211ENST00000502404 FAM98CQ17RN3 349 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-211ENST00000502404 CDK19Q9BWU1 502 aa16.11■□□□□ 0.17
UBE2D3-211ENST00000502404 EP400Q96L91 3159 aa16.11■□□□□ 0.17
UBE2D3-211ENST00000502404 DEFB132Q7Z7B7 95 aa16.1■□□□□ 0.17
UBE2D3-211ENST00000502404 CCDC61Q9Y6R9 512 aa16.1■□□□□ 0.17
UBE2D3-211ENST00000502404 PLCH1Q4KWH8 1693 aa16.1■□□□□ 0.17
UBE2D3-211ENST00000502404 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
UBE2D3-211ENST00000502404 GSE1Q14687 1217 aa16.08■□□□□ 0.16
UBE2D3-211ENST00000502404 SPATA31A5Q5VU36 1347 aa16.08■□□□□ 0.16
UBE2D3-211ENST00000502404 SPATA31A7Q8IWB4 1347 aa16.08■□□□□ 0.16
UBE2D3-211ENST00000502404 TRPM3Q9HCF6 1732 aaPredicted RBP16.08■□□□□ 0.16
UBE2D3-211ENST00000502404 COL14A1Q05707 1796 aaKnown RBP16.08■□□□□ 0.16
UBE2D3-211ENST00000502404 ABCA3Q99758 1704 aa16.07■□□□□ 0.16
UBE2D3-211ENST00000502404 ALS2Q96Q42 1657 aa16.06■□□□□ 0.16
UBE2D3-211ENST00000502404 PLEKHG3A1L390 1219 aa16.06■□□□□ 0.16
UBE2D3-211ENST00000502404 EVA1CP58658 441 aa16.06■□□□□ 0.16
UBE2D3-211ENST00000502404 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
UBE2D3-211ENST00000502404 FAM212AQ96EL1 285 aa16.06■□□□□ 0.16
UBE2D3-211ENST00000502404 CIZ1Q9ULV3 898 aaPredicted RBP16.06■□□□□ 0.16
UBE2D3-211ENST00000502404 BRWD3Q6RI45 1802 aa16.05■□□□□ 0.16
UBE2D3-211ENST00000502404 ATP7BP35670 1465 aa16.05■□□□□ 0.16
UBE2D3-211ENST00000502404 ACEP12821 1306 aa16.05■□□□□ 0.16
UBE2D3-211ENST00000502404 POLR3AO14802 1390 aaPredicted RBP16.04■□□□□ 0.16
UBE2D3-211ENST00000502404 KIAA0232Q92628 1395 aa16.04■□□□□ 0.16
UBE2D3-211ENST00000502404 ZC3H6P61129 1189 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-211ENST00000502404 ABTB2Q8N961 1025 aa16.04■□□□□ 0.16
UBE2D3-211ENST00000502404 STRN4Q9NRL3 753 aa16.04■□□□□ 0.16
UBE2D3-211ENST00000502404 ITSN1Q15811 1721 aa16.04■□□□□ 0.16
UBE2D3-211ENST00000502404 SRPK2P78362 688 aaKnown RBP16.03■□□□□ 0.16
UBE2D3-211ENST00000502404 SRCAPQ6ZRS2 3230 aa16.02■□□□□ 0.16
UBE2D3-211ENST00000502404 SPATA31A1Q5TZJ5 1347 aa16.02■□□□□ 0.16
UBE2D3-211ENST00000502404 CHRNA2Q15822 529 aa16.02■□□□□ 0.16
UBE2D3-211ENST00000502404 NUTM2GQ5VZR2 741 aa16.02■□□□□ 0.16
UBE2D3-211ENST00000502404 FAM196AQ6ZSG2 479 aa16.02■□□□□ 0.16
UBE2D3-211ENST00000502404 NLRP13Q86W25 1043 aa16.02■□□□□ 0.16
UBE2D3-211ENST00000502404 ARHGEF28Q8N1W1 1705 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms