RNA–Protein interactions for RNA: ENST00000502330.5

SPOCK3-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPOCK3, Length 2,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-204ENST00000502330 RWDD1Q9H446 243 aaPredicted RBP25.75■■□□□ 1.71
SPOCK3-204ENST00000502330 VIRMAQ69YN4 1812 aaKnown RBP25.75■■□□□ 1.71
SPOCK3-204ENST00000502330 MVPQ14764 893 aaKnown RBP25.75■■□□□ 1.71
SPOCK3-204ENST00000502330 TRIM35Q9UPQ4 493 aa25.75■■□□□ 1.71
SPOCK3-204ENST00000502330 AGLP35573 1532 aa25.75■■□□□ 1.71
SPOCK3-204ENST00000502330 DLC1Q96QB1 1528 aa25.75■■□□□ 1.71
SPOCK3-204ENST00000502330 FBXO31Q5XUX0 539 aaPredicted RBP25.74■■□□□ 1.71
SPOCK3-204ENST00000502330 CDK19Q9BWU1 502 aa25.73■■□□□ 1.71
SPOCK3-204ENST00000502330 U2SURPO15042 1029 aaKnown RBP25.73■■□□□ 1.71
SPOCK3-204ENST00000502330 USP19O94966 1318 aa25.73■■□□□ 1.71
SPOCK3-204ENST00000502330 BCL2L13Q9BXK5 485 aa25.72■■□□□ 1.71
SPOCK3-204ENST00000502330 TNNQ9UQP3 1299 aa25.72■■□□□ 1.71
SPOCK3-204ENST00000502330 DIAPH1O60610 1272 aaKnown RBP25.71■■□□□ 1.71
SPOCK3-204ENST00000502330 DZIP1LQ8IYY4 767 aaKnown RBP25.71■■□□□ 1.71
SPOCK3-204ENST00000502330 SLC4A3P48751 1232 aa25.69■■□□□ 1.7
SPOCK3-204ENST00000502330 CDC42BPGQ6DT37 1551 aa25.69■■□□□ 1.7
SPOCK3-204ENST00000502330 EXOSC9Q06265 439 aaKnown RBP25.68■■□□□ 1.7
SPOCK3-204ENST00000502330 ATP7BP35670 1465 aa25.67■■□□□ 1.7
SPOCK3-204ENST00000502330 FCHSD2O94868 740 aa25.67■■□□□ 1.7
SPOCK3-204ENST00000502330 NFKBIBQ15653 356 aa25.67■■□□□ 1.7
SPOCK3-204ENST00000502330 TSR2Q969E8 191 aaKnown RBP25.67■■□□□ 1.7
SPOCK3-204ENST00000502330 CABP1Q9NZU7 370 aa25.67■■□□□ 1.7
SPOCK3-204ENST00000502330 STAG3Q9UJ98 1225 aa25.67■■□□□ 1.7
SPOCK3-204ENST00000502330 PDZRN3Q9UPQ7 1066 aa25.67■■□□□ 1.7
SPOCK3-204ENST00000502330 FTSJ3Q8IY81 847 aaKnown RBP25.66■■□□□ 1.7
SPOCK3-204ENST00000502330 A2ML1A8K2U0 1454 aa25.66■■□□□ 1.7
SPOCK3-204ENST00000502330 SPATA31D1Q6ZQQ2 1576 aa25.65■■□□□ 1.7
SPOCK3-204ENST00000502330 RIPK4P57078 832 aa25.65■■□□□ 1.7
SPOCK3-204ENST00000502330 SMC4Q9NTJ3 1288 aa25.65■■□□□ 1.7
SPOCK3-204ENST00000502330 KIF20BQ96Q89 1820 aa25.63■■□□□ 1.69
SPOCK3-204ENST00000502330 DDX19BQ9UMR2 479 aa25.63■■□□□ 1.69
SPOCK3-204ENST00000502330 HDAC1Q13547 482 aaPredicted RBP25.62■■□□□ 1.69
SPOCK3-204ENST00000502330 SSH1Q8WYL5 1049 aa25.62■■□□□ 1.69
SPOCK3-204ENST00000502330 FAM69CQ0P6D2 419 aa25.62■■□□□ 1.69
SPOCK3-204ENST00000502330 ATF7IPQ6VMQ6 1270 aa25.62■■□□□ 1.69
SPOCK3-204ENST00000502330 SEC24BO95487 1268 aa25.61■■□□□ 1.69
SPOCK3-204ENST00000502330 TRIM27P14373 513 aa25.61■■□□□ 1.69
SPOCK3-204ENST00000502330 RIMS2Q9UQ26 1411 aa25.61■■□□□ 1.69
SPOCK3-204ENST00000502330 DIP2BQ9P265 1576 aa25.6■■□□□ 1.69
SPOCK3-204ENST00000502330 ALDH1L2Q3SY69 923 aa25.6■■□□□ 1.69
SPOCK3-204ENST00000502330 ZNF428Q96B54 188 aa25.6■■□□□ 1.69
SPOCK3-204ENST00000502330 CYB5RLQ6IPT4 315 aa25.59■■□□□ 1.69
SPOCK3-204ENST00000502330 BECN1Q14457 450 aa25.59■■□□□ 1.69
SPOCK3-204ENST00000502330 SENP3Q9H4L4 574 aaPredicted RBP25.59■■□□□ 1.69
SPOCK3-204ENST00000502330 IPO8O15397 1037 aaKnown RBP25.58■■□□□ 1.69
SPOCK3-204ENST00000502330 POLKQ9UBT6 870 aa25.58■■□□□ 1.69
SPOCK3-204ENST00000502330 KIF16BQ96L93 1317 aa25.58■■□□□ 1.69
SPOCK3-204ENST00000502330 FAM135BQ49AJ0 1406 aa25.58■■□□□ 1.69
SPOCK3-204ENST00000502330 SETD1AO15047 1707 aaKnown RBP25.58■■□□□ 1.68
SPOCK3-204ENST00000502330 BRPF1P55201 1214 aaPredicted RBP25.58■■□□□ 1.68
SPOCK3-204ENST00000502330 UPF2Q9HAU5 1272 aaKnown RBP25.58■■□□□ 1.68
SPOCK3-204ENST00000502330 RSPH6AQ9H0K4 717 aa25.57■■□□□ 1.68
SPOCK3-204ENST00000502330 PPIP5K1Q6PFW1 1433 aa25.57■■□□□ 1.68
SPOCK3-204ENST00000502330 NOB1Q9ULX3 412 aaKnown RBP25.56■■□□□ 1.68
SPOCK3-204ENST00000502330 CPSF1Q10570 1443 aaKnown RBP25.56■■□□□ 1.68
SPOCK3-204ENST00000502330 WAPLQ7Z5K2 1190 aa25.54■■□□□ 1.68
SPOCK3-204ENST00000502330 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.54■■□□□ 1.68
SPOCK3-204ENST00000502330 SIRT1Q96EB6 747 aa25.54■■□□□ 1.68
SPOCK3-204ENST00000502330 TBC1D32Q96NH3 1257 aa25.54■■□□□ 1.68
SPOCK3-204ENST00000502330 LRRC7Q96NW7 1537 aa25.54■■□□□ 1.68
SPOCK3-204ENST00000502330 EDC4Q6P2E9 1401 aaKnown RBP25.54■■□□□ 1.68
SPOCK3-204ENST00000502330 RIMBP3CA6NJZ7 1639 aa25.54■■□□□ 1.68
SPOCK3-204ENST00000502330 RIMBP3BA6NNM3 1639 aa25.54■■□□□ 1.68
SPOCK3-204ENST00000502330 RIMBP3Q9UFD9 1639 aa25.54■■□□□ 1.68
SPOCK3-204ENST00000502330 GSE1Q14687 1217 aa25.54■■□□□ 1.68
SPOCK3-204ENST00000502330 SMC5Q8IY18 1101 aa25.52■■□□□ 1.68
SPOCK3-204ENST00000502330 CALD1Q05682 793 aaKnown RBP25.52■■□□□ 1.68
SPOCK3-204ENST00000502330 ITPRIPQ8IWB1 547 aa25.52■■□□□ 1.68
SPOCK3-204ENST00000502330 ZBTB40Q9NUA8 1239 aa25.52■■□□□ 1.68
SPOCK3-204ENST00000502330 AATKQ6ZMQ8 1374 aa25.52■■□□□ 1.68
SPOCK3-204ENST00000502330 WASLO00401 505 aaPredicted RBP25.51■■□□□ 1.67
SPOCK3-204ENST00000502330 PRKAR2BP31323 418 aa25.51■■□□□ 1.67
SPOCK3-204ENST00000502330 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.51■■□□□ 1.67
SPOCK3-204ENST00000502330 NFE2L2Q16236 605 aa25.5■■□□□ 1.67
SPOCK3-204ENST00000502330 TMEM57Q8N5G2 664 aa25.49■■□□□ 1.67
SPOCK3-204ENST00000502330 CDK12Q9NYV4 1490 aaPredicted RBP25.47■■□□□ 1.67
SPOCK3-204ENST00000502330 NRXN3Q9Y4C0 1643 aa25.47■■□□□ 1.67
SPOCK3-204ENST00000502330 IL13P35225 146 aa25.47■■□□□ 1.67
SPOCK3-204ENST00000502330 TECPR2O15040 1411 aa25.46■■□□□ 1.67
SPOCK3-204ENST00000502330 ARHGAP45Q92619 1136 aa25.46■■□□□ 1.67
SPOCK3-204ENST00000502330 CHMP4BQ9H444 224 aaKnown RBP25.45■■□□□ 1.67
SPOCK3-204ENST00000502330 HDGFP51858 240 aaKnown RBP25.45■■□□□ 1.66
SPOCK3-204ENST00000502330 IFT57Q9NWB7 429 aa25.44■■□□□ 1.66
SPOCK3-204ENST00000502330 FRAT2O75474 233 aaPredicted RBP25.44■■□□□ 1.66
SPOCK3-204ENST00000502330 METP08581 1390 aa25.43■■□□□ 1.66
SPOCK3-204ENST00000502330 GNAI1P63096 354 aa25.43■■□□□ 1.66
SPOCK3-204ENST00000502330 ZNF853P0CG23 659 aa25.42■■□□□ 1.66
SPOCK3-204ENST00000502330 PHACTR3Q96KR7 559 aa25.42■■□□□ 1.66
SPOCK3-204ENST00000502330 KNDC1Q76NI1 1749 aa25.42■■□□□ 1.66
SPOCK3-204ENST00000502330 VAMP4O75379 141 aa25.42■■□□□ 1.66
SPOCK3-204ENST00000502330 CCDC61Q9Y6R9 512 aa25.42■■□□□ 1.66
SPOCK3-204ENST00000502330 PIK3R4Q99570 1358 aa25.42■■□□□ 1.66
SPOCK3-204ENST00000502330 NUDT16Q96DE0 195 aaKnown RBP25.41■■□□□ 1.66
SPOCK3-204ENST00000502330 FBLN1P23142 703 aa25.4■■□□□ 1.66
SPOCK3-204ENST00000502330 LMOD3Q0VAK6 560 aa25.4■■□□□ 1.66
SPOCK3-204ENST00000502330 ANTXR1Q9H6X2 564 aa25.4■■□□□ 1.66
SPOCK3-204ENST00000502330 EMILIN1Q9Y6C2 1016 aa25.4■■□□□ 1.66
SPOCK3-204ENST00000502330 MAP2P11137 1827 aaKnown RBP25.4■■□□□ 1.66
SPOCK3-204ENST00000502330 NUCB1Q02818 461 aa25.39■■□□□ 1.66
SPOCK3-204ENST00000502330 NME9Q86XW9 330 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms