RNA–Protein interactions for RNA: ENST00000497784.1

BRAF-205, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-205ENST00000497784 PDE3BQ13370 1112 aa13.46□□□□□ -0.25
BRAF-205ENST00000497784 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.26
BRAF-205ENST00000497784 BARGINQ6ZT62 677 aa13.46□□□□□ -0.26
BRAF-205ENST00000497784 ATF5Q9Y2D1 282 aaPredicted RBP13.46□□□□□ -0.26
BRAF-205ENST00000497784 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
BRAF-205ENST00000497784 SPATA31A1Q5TZJ5 1347 aa13.45□□□□□ -0.26
BRAF-205ENST00000497784 WWC3Q9ULE0 1092 aa13.43□□□□□ -0.26
BRAF-205ENST00000497784 ANO8Q9HCE9 1232 aaPredicted RBP13.42□□□□□ -0.26
BRAF-205ENST00000497784 ADCY9O60503 1353 aa13.41□□□□□ -0.26
BRAF-205ENST00000497784 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
BRAF-205ENST00000497784 KLRG1Q96E93 195 aa13.41□□□□□ -0.26
BRAF-205ENST00000497784 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
BRAF-205ENST00000497784 CABLES1Q8TDN4 633 aa13.39□□□□□ -0.27
BRAF-205ENST00000497784 DAPK1P53355 1430 aa13.39□□□□□ -0.27
BRAF-205ENST00000497784 NAIPQ13075 1403 aa13.39□□□□□ -0.27
BRAF-205ENST00000497784 SLC15A2Q16348 729 aa13.39□□□□□ -0.27
BRAF-205ENST00000497784 THRAP3Q9Y2W1 955 aaKnown RBP13.36□□□□□ -0.27
BRAF-205ENST00000497784 SLC16A10Q8TF71 515 aa13.36□□□□□ -0.27
BRAF-205ENST00000497784 KIF3CO14782 793 aa13.35□□□□□ -0.27
BRAF-205ENST00000497784 PDGFDQ9GZP0 370 aaPredicted RBP13.35□□□□□ -0.27
BRAF-205ENST00000497784 E9PCH4 1651 aa13.35□□□□□ -0.27
BRAF-205ENST00000497784 FMN2Q9NZ56 1722 aa13.34□□□□□ -0.27
BRAF-205ENST00000497784 TOMM70O94826 608 aa13.34□□□□□ -0.27
BRAF-205ENST00000497784 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
BRAF-205ENST00000497784 OVOS2A0A0G2JMS6 1433 aa13.34□□□□□ -0.27
BRAF-205ENST00000497784 OVOS2A0A0J9YW53 1432 aa13.34□□□□□ -0.27
BRAF-205ENST00000497784 BCL9O00512 1426 aa13.34□□□□□ -0.27
BRAF-205ENST00000497784 OVOS2Q6IE36 1432 aa13.34□□□□□ -0.27
BRAF-205ENST00000497784 NRXN1Q9ULB1 1477 aa13.33□□□□□ -0.27
BRAF-205ENST00000497784 ZNF326Q5BKZ1 582 aaKnown RBP13.33□□□□□ -0.28
BRAF-205ENST00000497784 WDR90Q96KV7 1748 aa13.33□□□□□ -0.28
BRAF-205ENST00000497784 POLD1P28340 1107 aa13.33□□□□□ -0.28
BRAF-205ENST00000497784 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
BRAF-205ENST00000497784 ANKRD50Q9ULJ7 1429 aa13.32□□□□□ -0.28
BRAF-205ENST00000497784 COL24A1Q17RW2 1714 aa13.32□□□□□ -0.28
BRAF-205ENST00000497784 PELP1Q8IZL8 1130 aaKnown RBP13.31□□□□□ -0.28
BRAF-205ENST00000497784 TECPR2O15040 1411 aa13.31□□□□□ -0.28
BRAF-205ENST00000497784 PEAK1Q9H792 1746 aa13.29□□□□□ -0.28
BRAF-205ENST00000497784 PROM2Q8N271 834 aa13.29□□□□□ -0.28
BRAF-205ENST00000497784 TCP11L2Q8N4U5 519 aa13.29□□□□□ -0.28
BRAF-205ENST00000497784 PARP4Q9UKK3 1724 aaKnown RBP13.29□□□□□ -0.28
BRAF-205ENST00000497784 PRDM11Q9NQV5 511 aa13.29□□□□□ -0.28
BRAF-205ENST00000497784 ATP7BP35670 1465 aa13.29□□□□□ -0.28
BRAF-205ENST00000497784 RPGRIP1LQ68CZ1 1315 aa13.28□□□□□ -0.28
BRAF-205ENST00000497784 LMOD2Q6P5Q4 547 aa13.28□□□□□ -0.28
BRAF-205ENST00000497784 RBM46Q8TBY0 533 aaKnown RBP13.28□□□□□ -0.28
BRAF-205ENST00000497784 TXNRD1Q16881 649 aa13.27□□□□□ -0.28
BRAF-205ENST00000497784 SIRT1Q96EB6 747 aa13.27□□□□□ -0.28
BRAF-205ENST00000497784 YBX3P16989 372 aaKnown RBP eCLIP13.27□□□□□ -0.29
BRAF-205ENST00000497784 FSTL1Q12841 308 aa13.26□□□□□ -0.29
BRAF-205ENST00000497784 TNS2Q63HR2 1409 aa13.25□□□□□ -0.29
BRAF-205ENST00000497784 SSH2Q76I76 1423 aa13.25□□□□□ -0.29
BRAF-205ENST00000497784 TULP4Q9NRJ4 1543 aa13.25□□□□□ -0.29
BRAF-205ENST00000497784 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
BRAF-205ENST00000497784 SBF2Q86WG5 1849 aa13.24□□□□□ -0.29
BRAF-205ENST00000497784 ARHGEF28Q8N1W1 1705 aaKnown RBP13.23□□□□□ -0.29
BRAF-205ENST00000497784 ABCC11Q96J66 1382 aa13.23□□□□□ -0.29
BRAF-205ENST00000497784 TRPM3Q9HCF6 1732 aaPredicted RBP13.23□□□□□ -0.29
BRAF-205ENST00000497784 ANKARQ7Z5J8 1434 aa13.23□□□□□ -0.29
BRAF-205ENST00000497784 BRD4O60885 1362 aaPredicted RBP13.23□□□□□ -0.29
BRAF-205ENST00000497784 CRYBG1Q9Y4K1 1723 aa13.23□□□□□ -0.29
BRAF-205ENST00000497784 CLTCL1P53675 1640 aa13.22□□□□□ -0.29
BRAF-205ENST00000497784 EVA1CP58658 441 aa13.22□□□□□ -0.29
BRAF-205ENST00000497784 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
BRAF-205ENST00000497784 HSPA1AP0DMV8 641 aaKnown RBP13.22□□□□□ -0.29
BRAF-205ENST00000497784 HSPA1BP0DMV9 641 aaKnown RBP13.22□□□□□ -0.29
BRAF-205ENST00000497784 GPRASP1Q5JY77 1395 aa13.22□□□□□ -0.29
BRAF-205ENST00000497784 QSER1Q2KHR3 1735 aa13.21□□□□□ -0.29
BRAF-205ENST00000497784 KNDC1Q76NI1 1749 aa13.21□□□□□ -0.3
BRAF-205ENST00000497784 STRN4Q9NRL3 753 aa13.21□□□□□ -0.3
BRAF-205ENST00000497784 NUTM2FA1L443 756 aa13.2□□□□□ -0.3
BRAF-205ENST00000497784 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
BRAF-205ENST00000497784 ZNF526Q8TF50 670 aaPredicted RBP13.2□□□□□ -0.3
BRAF-205ENST00000497784 PRDM10Q9NQV6 1147 aa13.19□□□□□ -0.3
BRAF-205ENST00000497784 PAPPAQ13219 1627 aa13.19□□□□□ -0.3
BRAF-205ENST00000497784 CEP350Q5VT06 3117 aa13.19□□□□□ -0.3
BRAF-205ENST00000497784 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
BRAF-205ENST00000497784 TOPAZ1Q8N9V7 1692 aa13.19□□□□□ -0.3
BRAF-205ENST00000497784 RGS19P49795 217 aa13.18□□□□□ -0.3
BRAF-205ENST00000497784 KLHL34Q8N239 644 aa13.18□□□□□ -0.3
BRAF-205ENST00000497784 CDCA7Q9BWT1 371 aaPredicted RBP13.18□□□□□ -0.3
BRAF-205ENST00000497784 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
BRAF-205ENST00000497784 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
BRAF-205ENST00000497784 CD2APQ9Y5K6 639 aa13.17□□□□□ -0.3
BRAF-205ENST00000497784 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
BRAF-205ENST00000497784 MLLT1Q03111 559 aaPredicted RBP13.17□□□□□ -0.3
BRAF-205ENST00000497784 FAM161AQ3B820 660 aa13.17□□□□□ -0.3
BRAF-205ENST00000497784 C10orf71Q711Q0 1435 aa13.16□□□□□ -0.3
BRAF-205ENST00000497784 IFT172Q9UG01 1749 aa13.16□□□□□ -0.3
BRAF-205ENST00000497784 EIF3AQ14152 1382 aaKnown RBP13.14□□□□□ -0.31
BRAF-205ENST00000497784 DDB1Q16531 1140 aa13.14□□□□□ -0.31
BRAF-205ENST00000497784 WAPLQ7Z5K2 1190 aa13.14□□□□□ -0.31
BRAF-205ENST00000497784 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
BRAF-205ENST00000497784 CPDO75976 1380 aa13.13□□□□□ -0.31
BRAF-205ENST00000497784 KIF1BO60333 1816 aa13.13□□□□□ -0.31
BRAF-205ENST00000497784 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
BRAF-205ENST00000497784 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
BRAF-205ENST00000497784 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
BRAF-205ENST00000497784 CICQ96RK0 1608 aaPredicted RBP13.12□□□□□ -0.31
BRAF-205ENST00000497784 USP19O94966 1318 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms