RNA–Protein interactions for RNA: ENST00000495985.5

ERCC8-207, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-207ENST00000495985 PTCRAQ6ISU1 281 aaPredicted RBP7.59□□□□□ -1.19
ERCC8-207ENST00000495985 CCDC24Q8N4L8 307 aa7.59□□□□□ -1.19
ERCC8-207ENST00000495985 CCDC82Q8N4S0 544 aa7.59□□□□□ -1.19
ERCC8-207ENST00000495985 KCNH2Q12809 1159 aa7.58□□□□□ -1.2
ERCC8-207ENST00000495985 WWC1Q8IX03 1113 aa7.58□□□□□ -1.2
ERCC8-207ENST00000495985 PPEF1O14829 653 aaPredicted RBP7.57□□□□□ -1.2
ERCC8-207ENST00000495985 ADAMTS19Q8TE59 1207 aa7.57□□□□□ -1.2
ERCC8-207ENST00000495985 PODXL2Q9NZ53 605 aa7.57□□□□□ -1.2
ERCC8-207ENST00000495985 FKBPLQ9UIM3 349 aa7.57□□□□□ -1.2
ERCC8-207ENST00000495985 KCNC4Q03721 635 aa7.56□□□□□ -1.2
ERCC8-207ENST00000495985 WASHC4Q2M389 1173 aa7.56□□□□□ -1.2
ERCC8-207ENST00000495985 HDGFL1Q5TGJ6 251 aa7.55□□□□□ -1.2
ERCC8-207ENST00000495985 GLMNQ92990 594 aa7.55□□□□□ -1.2
ERCC8-207ENST00000495985 CALR3Q96L12 384 aaKnown RBP7.55□□□□□ -1.2
ERCC8-207ENST00000495985 FCF1Q9Y324 198 aaKnown RBP7.55□□□□□ -1.2
ERCC8-207ENST00000495985 ITGBL1O95965 494 aaPredicted RBP7.54□□□□□ -1.2
ERCC8-207ENST00000495985 FBXO45P0C2W1 286 aa7.54□□□□□ -1.2
ERCC8-207ENST00000495985 TRIM26Q12899 539 aaPredicted RBP7.54□□□□□ -1.2
ERCC8-207ENST00000495985 PNMA1Q8ND90 353 aa7.53□□□□□ -1.2
ERCC8-207ENST00000495985 UNC93B1Q9H1C4 597 aa7.53□□□□□ -1.2
ERCC8-207ENST00000495985 OCSTAMPQ9BR26 566 aa7.52□□□□□ -1.21
ERCC8-207ENST00000495985 ALG2Q9H553 416 aa7.52□□□□□ -1.21
ERCC8-207ENST00000495985 ZBBXA8MT70 800 aa7.51□□□□□ -1.21
ERCC8-207ENST00000495985 RNF223E7ERA6 249 aa7.51□□□□□ -1.21
ERCC8-207ENST00000495985 NR1H3Q13133 447 aa7.51□□□□□ -1.21
ERCC8-207ENST00000495985 BAP1Q92560 729 aa7.51□□□□□ -1.21
ERCC8-207ENST00000495985 CCDC97Q96F63 343 aaPredicted RBP7.51□□□□□ -1.21
ERCC8-207ENST00000495985 LINC01559Q495D7 138 aa7.5□□□□□ -1.21
ERCC8-207ENST00000495985 PLA2G2CQ5R387 149 aa7.5□□□□□ -1.21
ERCC8-207ENST00000495985 ARMC2Q8NEN0 867 aa7.5□□□□□ -1.21
ERCC8-207ENST00000495985 SERPINA10Q9UK55 444 aa7.5□□□□□ -1.21
ERCC8-207ENST00000495985 PPP1R18Q6NYC8 613 aa7.49□□□□□ -1.21
ERCC8-207ENST00000495985 PDXDC2PQ6P474 469 aa7.49□□□□□ -1.21
ERCC8-207ENST00000495985 ZC3H4Q9UPT8 1303 aaKnown RBP7.49□□□□□ -1.21
ERCC8-207ENST00000495985 SEMA3FQ13275 785 aa7.48□□□□□ -1.21
ERCC8-207ENST00000495985 FOXJ1Q92949 421 aa7.48□□□□□ -1.21
ERCC8-207ENST00000495985 EIF4G2P78344 907 aaKnown RBP eCLIP7.47□□□□□ -1.21
ERCC8-207ENST00000495985 PTK2Q05397 1052 aa7.47□□□□□ -1.21
ERCC8-207ENST00000495985 NBPF14Q5TI25 921 aa7.47□□□□□ -1.21
ERCC8-207ENST00000495985 ARHGAP9Q9BRR9 750 aa7.47□□□□□ -1.21
ERCC8-207ENST00000495985 CARD14Q9BXL6 1004 aa7.47□□□□□ -1.21
ERCC8-207ENST00000495985 PLA2G2EQ9NZK7 142 aa7.47□□□□□ -1.21
ERCC8-207ENST00000495985 MAGEB6P1A0A0J9YX57 407 aa7.46□□□□□ -1.22
ERCC8-207ENST00000495985 SH3BP5LQ7L8J4 393 aa7.46□□□□□ -1.22
ERCC8-207ENST00000495985 ANKLE1Q8NAG6 615 aa7.46□□□□□ -1.22
ERCC8-207ENST00000495985 ADAM32Q8TC27 787 aa7.46□□□□□ -1.22
ERCC8-207ENST00000495985 GPKOWQ92917 476 aaPredicted RBP eCLIP7.46□□□□□ -1.22
ERCC8-207ENST00000495985 UCN2Q96RP3 112 aa7.46□□□□□ -1.22
ERCC8-207ENST00000495985 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.46□□□□□ -1.22
ERCC8-207ENST00000495985 RFX1P22670 979 aa7.45□□□□□ -1.22
ERCC8-207ENST00000495985 C4orf48Q5BLP8 95 aa7.45□□□□□ -1.22
ERCC8-207ENST00000495985 ZBTB33Q86T24 672 aa7.45□□□□□ -1.22
ERCC8-207ENST00000495985 ZNF511Q8NB15 262 aa7.45□□□□□ -1.22
ERCC8-207ENST00000495985 GPSM3Q9Y4H4 160 aa7.45□□□□□ -1.22
ERCC8-207ENST00000495985 ZBTB24O43167 697 aaPredicted RBP7.44□□□□□ -1.22
ERCC8-207ENST00000495985 SOX11P35716 441 aa7.44□□□□□ -1.22
ERCC8-207ENST00000495985 GGCXP38435 758 aa7.44□□□□□ -1.22
ERCC8-207ENST00000495985 SH3BP2P78314 561 aa7.44□□□□□ -1.22
ERCC8-207ENST00000495985 AGERQ15109 404 aa7.44□□□□□ -1.22
ERCC8-207ENST00000495985 SH3RF1Q7Z6J0 888 aa7.44□□□□□ -1.22
ERCC8-207ENST00000495985 PPP1R12CQ9BZL4 782 aa7.44□□□□□ -1.22
ERCC8-207ENST00000495985 TFIP11Q9UBB9 837 aaKnown RBP7.44□□□□□ -1.22
ERCC8-207ENST00000495985 PCDHB9Q9Y5E1 797 aa7.44□□□□□ -1.22
ERCC8-207ENST00000495985 PALM3A6NDB9 673 aaPredicted RBP7.43□□□□□ -1.22
ERCC8-207ENST00000495985 PIK3CDO00329 1044 aa7.43□□□□□ -1.22
ERCC8-207ENST00000495985 PDIA4P13667 645 aaKnown RBP7.43□□□□□ -1.22
ERCC8-207ENST00000495985 CFAP70Q5T0N1 1121 aa7.43□□□□□ -1.22
ERCC8-207ENST00000495985 TBC1D9Q6ZT07 1266 aa7.43□□□□□ -1.22
ERCC8-207ENST00000495985 EMID1Q96A84 441 aaPredicted RBP7.43□□□□□ -1.22
ERCC8-207ENST00000495985 SKOR1P84550 965 aa7.42□□□□□ -1.22
ERCC8-207ENST00000495985 TRIM32Q13049 653 aa7.42□□□□□ -1.22
ERCC8-207ENST00000495985 LIAT1Q6ZQX7 453 aa7.42□□□□□ -1.22
ERCC8-207ENST00000495985 CEP126Q9P2H0 1117 aa7.42□□□□□ -1.22
ERCC8-207ENST00000495985 LMOD1P29536 600 aaPredicted RBP7.41□□□□□ -1.22
ERCC8-207ENST00000495985 ERFEQ4G0M1 354 aa7.41□□□□□ -1.22
ERCC8-207ENST00000495985 BPHLQ86WA6 291 aaPredicted RBP7.41□□□□□ -1.22
ERCC8-207ENST00000495985 TSGA10IPQ3SY00 556 aa7.4□□□□□ -1.22
ERCC8-207ENST00000495985 CDCA8Q53HL2 280 aa7.4□□□□□ -1.22
ERCC8-207ENST00000495985 DZIP3Q86Y13 1208 aaKnown RBP7.4□□□□□ -1.22
ERCC8-207ENST00000495985 FAM174AQ8TBP5 190 aa7.4□□□□□ -1.22
ERCC8-207ENST00000495985 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.39□□□□□ -1.23
ERCC8-207ENST00000495985 ATP9BO43861 1147 aa7.38□□□□□ -1.23
ERCC8-207ENST00000495985 SKIP12755 728 aa7.38□□□□□ -1.23
ERCC8-207ENST00000495985 RPIAP49247 311 aa7.38□□□□□ -1.23
ERCC8-207ENST00000495985 SRPK2P78362 688 aaKnown RBP7.38□□□□□ -1.23
ERCC8-207ENST00000495985 PHTF2Q8N3S3 785 aa7.38□□□□□ -1.23
ERCC8-207ENST00000495985 MAFBQ9Y5Q3 323 aaPredicted RBP7.38□□□□□ -1.23
ERCC8-207ENST00000495985 GIGYF1O75420 1035 aaPredicted RBP7.37□□□□□ -1.23
ERCC8-207ENST00000495985 CD2BP2O95400 341 aaKnown RBP7.37□□□□□ -1.23
ERCC8-207ENST00000495985 SLFNL1Q499Z3 407 aa7.37□□□□□ -1.23
ERCC8-207ENST00000495985 IFFO2Q5TF58 517 aa7.37□□□□□ -1.23
ERCC8-207ENST00000495985 DEPDC4Q8N2C3 294 aa7.37□□□□□ -1.23
ERCC8-207ENST00000495985 C1QTNF2Q9BXJ5 285 aa7.37□□□□□ -1.23
ERCC8-207ENST00000495985 SLC19A1P41440 591 aa7.36□□□□□ -1.23
ERCC8-207ENST00000495985 WNT7BP56706 349 aa7.36□□□□□ -1.23
ERCC8-207ENST00000495985 RNF135Q8IUD6 432 aa7.36□□□□□ -1.23
ERCC8-207ENST00000495985 ZBTB7CA1YPR0 619 aa7.35□□□□□ -1.23
ERCC8-207ENST00000495985 MCCD1P59942 119 aaPredicted RBP7.35□□□□□ -1.23
ERCC8-207ENST00000495985 RC3H1Q5TC82 1133 aaKnown RBP7.35□□□□□ -1.23
ERCC8-207ENST00000495985 EHBP1Q8NDI1 1231 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms