RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 FKBP8Q14318 412 aa26.69■■□□□ 1.86
LINC01558-202ENST00000495520 GGNBP2Q9H3C7 697 aa26.69■■□□□ 1.86
LINC01558-202ENST00000495520 ITSN1Q15811 1721 aa26.67■■□□□ 1.86
LINC01558-202ENST00000495520 MSH6P52701 1360 aa26.67■■□□□ 1.86
LINC01558-202ENST00000495520 TNNT2P45379 298 aaPredicted RBP26.67■■□□□ 1.86
LINC01558-202ENST00000495520 PLEKHG3A1L390 1219 aa26.66■■□□□ 1.86
LINC01558-202ENST00000495520 ATF3P18847 181 aa26.66■■□□□ 1.86
LINC01558-202ENST00000495520 SHPRHQ149N8 1683 aa26.66■■□□□ 1.86
LINC01558-202ENST00000495520 KIF20BQ96Q89 1820 aa26.66■■□□□ 1.86
LINC01558-202ENST00000495520 SENP3-EIF4A1A0A087X0R7 540 aa26.66■■□□□ 1.86
LINC01558-202ENST00000495520 ZNF692Q9BU19 519 aaPredicted RBP26.66■■□□□ 1.86
LINC01558-202ENST00000495520 PMFBP1Q8TBY8 1022 aa26.64■■□□□ 1.86
LINC01558-202ENST00000495520 CFAP53Q96M91 514 aa26.64■■□□□ 1.86
LINC01558-202ENST00000495520 DCCP43146 1447 aa26.64■■□□□ 1.85
LINC01558-202ENST00000495520 MON2Q7Z3U7 1717 aa26.63■■□□□ 1.85
LINC01558-202ENST00000495520 AKAP12Q02952 1782 aa26.63■■□□□ 1.85
LINC01558-202ENST00000495520 RNF123Q5XPI4 1314 aa26.63■■□□□ 1.85
LINC01558-202ENST00000495520 NGEFQ8N5V2 710 aa26.62■■□□□ 1.85
LINC01558-202ENST00000495520 ZNF521Q96K83 1311 aa26.62■■□□□ 1.85
LINC01558-202ENST00000495520 ACEP12821 1306 aa26.61■■□□□ 1.85
LINC01558-202ENST00000495520 LTBP4Q8N2S1 1624 aa26.61■■□□□ 1.85
LINC01558-202ENST00000495520 ESCO1Q5FWF5 840 aa26.6■■□□□ 1.85
LINC01558-202ENST00000495520 CADPS2Q86UW7 1296 aa26.6■■□□□ 1.85
LINC01558-202ENST00000495520 PNPLA6Q8IY17 1366 aa26.59■■□□□ 1.85
LINC01558-202ENST00000495520 NGDNQ8NEJ9 315 aaKnown RBP26.59■■□□□ 1.85
LINC01558-202ENST00000495520 SALL2Q9Y467 1007 aaPredicted RBP26.59■■□□□ 1.85
LINC01558-202ENST00000495520 COL3A1P02461 1466 aaPredicted RBP26.58■■□□□ 1.85
LINC01558-202ENST00000495520 MST1RQ04912 1400 aa26.58■■□□□ 1.85
LINC01558-202ENST00000495520 ERICH6BQ5W0A0 696 aa26.58■■□□□ 1.85
LINC01558-202ENST00000495520 C1orf167Q5SNV9 1468 aa26.58■■□□□ 1.84
LINC01558-202ENST00000495520 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.57■■□□□ 1.84
LINC01558-202ENST00000495520 PHF8Q9UPP1 1060 aa26.57■■□□□ 1.84
LINC01558-202ENST00000495520 ORAI2Q96SN7 254 aa26.56■■□□□ 1.84
LINC01558-202ENST00000495520 CCDC146Q8IYE0 955 aa26.54■■□□□ 1.84
LINC01558-202ENST00000495520 CDCA7LQ96GN5 454 aa26.54■■□□□ 1.84
LINC01558-202ENST00000495520 AATKQ6ZMQ8 1374 aa26.53■■□□□ 1.84
LINC01558-202ENST00000495520 APAF1O14727 1248 aa26.53■■□□□ 1.84
LINC01558-202ENST00000495520 SSH2Q76I76 1423 aa26.53■■□□□ 1.84
LINC01558-202ENST00000495520 NME9Q86XW9 330 aa26.53■■□□□ 1.84
LINC01558-202ENST00000495520 NRKQ7Z2Y5 1582 aa26.52■■□□□ 1.84
LINC01558-202ENST00000495520 USP6P35125 1406 aa26.52■■□□□ 1.84
LINC01558-202ENST00000495520 NCBP3Q53F19 620 aaKnown RBP26.52■■□□□ 1.84
LINC01558-202ENST00000495520 RUNDC1Q96C34 613 aa26.51■■□□□ 1.83
LINC01558-202ENST00000495520 TTC21BQ7Z4L5 1316 aa26.5■■□□□ 1.83
LINC01558-202ENST00000495520 POLKQ9UBT6 870 aa26.5■■□□□ 1.83
LINC01558-202ENST00000495520 IQSEC2Q5JU85 1478 aa26.48■■□□□ 1.83
LINC01558-202ENST00000495520 KIF1AQ12756 1690 aa26.47■■□□□ 1.83
LINC01558-202ENST00000495520 GOLGA2Q08379 1002 aa26.47■■□□□ 1.83
LINC01558-202ENST00000495520 TRMT2AQ8IZ69 625 aaKnown RBP26.47■■□□□ 1.83
LINC01558-202ENST00000495520 SLAIN2Q9P270 581 aa26.47■■□□□ 1.83
LINC01558-202ENST00000495520 FOXO3O43524 673 aa26.46■■□□□ 1.83
LINC01558-202ENST00000495520 COG3Q96JB2 828 aa26.46■■□□□ 1.83
LINC01558-202ENST00000495520 ZRANB1Q9UGI0 708 aa26.46■■□□□ 1.83
LINC01558-202ENST00000495520 PHF23Q9BUL5 403 aaPredicted RBP26.45■■□□□ 1.82
LINC01558-202ENST00000495520 PSME1Q06323 249 aa26.44■■□□□ 1.82
LINC01558-202ENST00000495520 SLFN5Q08AF3 891 aa26.44■■□□□ 1.82
LINC01558-202ENST00000495520 OVOS2A0A0J9YW53 1432 aa26.43■■□□□ 1.82
LINC01558-202ENST00000495520 OVOS2Q6IE36 1432 aa26.43■■□□□ 1.82
LINC01558-202ENST00000495520 U2AF1L5P0DN76 240 aaPredicted RBP26.43■■□□□ 1.82
LINC01558-202ENST00000495520 U2AF1Q01081 240 aaKnown RBP eCLIP26.43■■□□□ 1.82
LINC01558-202ENST00000495520 DUSP27Q5VZP5 1158 aa26.43■■□□□ 1.82
LINC01558-202ENST00000495520 RCAN3Q9UKA8 241 aa26.43■■□□□ 1.82
LINC01558-202ENST00000495520 TTC21AQ8NDW8 1320 aa26.43■■□□□ 1.82
LINC01558-202ENST00000495520 DIAPH1O60610 1272 aaKnown RBP26.42■■□□□ 1.82
LINC01558-202ENST00000495520 XPCQ01831 940 aaPredicted RBP26.41■■□□□ 1.82
LINC01558-202ENST00000495520 PAK3O75914 559 aaPredicted RBP26.41■■□□□ 1.82
LINC01558-202ENST00000495520 IRX6P78412 446 aaPredicted RBP26.41■■□□□ 1.82
LINC01558-202ENST00000495520 CCDC27Q2M243 656 aa26.41■■□□□ 1.82
LINC01558-202ENST00000495520 TCP11L2Q8N4U5 519 aa26.41■■□□□ 1.82
LINC01558-202ENST00000495520 CDK12Q9NYV4 1490 aaPredicted RBP26.4■■□□□ 1.82
LINC01558-202ENST00000495520 MAP2P11137 1827 aaKnown RBP26.4■■□□□ 1.82
LINC01558-202ENST00000495520 BRINP3Q76B58 766 aa26.4■■□□□ 1.82
LINC01558-202ENST00000495520 PLEKHF1Q96S99 279 aa26.4■■□□□ 1.82
LINC01558-202ENST00000495520 USP31Q70CQ4 1352 aa26.39■■□□□ 1.82
LINC01558-202ENST00000495520 FBLN1P23142 703 aa26.39■■□□□ 1.82
LINC01558-202ENST00000495520 WWC1Q8IX03 1113 aa26.39■■□□□ 1.82
LINC01558-202ENST00000495520 DDX17Q92841 729 aaKnown RBP26.38■■□□□ 1.81
LINC01558-202ENST00000495520 KRT28Q7Z3Y7 464 aa26.37■■□□□ 1.81
LINC01558-202ENST00000495520 E9PSI1 815 aa26.36■■□□□ 1.81
LINC01558-202ENST00000495520 EMILIN1Q9Y6C2 1016 aa26.36■■□□□ 1.81
LINC01558-202ENST00000495520 NPHP3Q7Z494 1330 aa26.35■■□□□ 1.81
LINC01558-202ENST00000495520 PIK3C2AO00443 1686 aa26.34■■□□□ 1.81
LINC01558-202ENST00000495520 U2SURPO15042 1029 aaKnown RBP26.34■■□□□ 1.81
LINC01558-202ENST00000495520 RRP1P56182 461 aaKnown RBP26.34■■□□□ 1.81
LINC01558-202ENST00000495520 ABTB2Q8N961 1025 aa26.34■■□□□ 1.81
LINC01558-202ENST00000495520 PNNQ9H307 717 aaKnown RBP26.34■■□□□ 1.81
LINC01558-202ENST00000495520 SPINK5Q9NQ38 1064 aaPredicted RBP26.34■■□□□ 1.81
LINC01558-202ENST00000495520 PPP4R2Q9NY27 417 aa26.34■■□□□ 1.81
LINC01558-202ENST00000495520 FCHSD2O94868 740 aa26.33■■□□□ 1.81
LINC01558-202ENST00000495520 IL13P35225 146 aa26.33■■□□□ 1.81
LINC01558-202ENST00000495520 WDR63Q8IWG1 891 aa26.33■■□□□ 1.81
LINC01558-202ENST00000495520 NUTM2GQ5VZR2 741 aa26.32■■□□□ 1.8
LINC01558-202ENST00000495520 TRPM3Q9HCF6 1732 aaPredicted RBP26.31■■□□□ 1.8
LINC01558-202ENST00000495520 NLRP6P59044 892 aa26.3■■□□□ 1.8
LINC01558-202ENST00000495520 LMOD2Q6P5Q4 547 aa26.29■■□□□ 1.8
LINC01558-202ENST00000495520 PPM1GO15355 546 aaPredicted RBP26.28■■□□□ 1.8
LINC01558-202ENST00000495520 RRS1Q15050 365 aaKnown RBP26.28■■□□□ 1.8
LINC01558-202ENST00000495520 RRP7AQ9Y3A4 280 aaKnown RBP26.28■■□□□ 1.8
LINC01558-202ENST00000495520 PXDNQ92626 1479 aa26.28■■□□□ 1.8
LINC01558-202ENST00000495520 RSPH6AQ9H0K4 717 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms