RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 PDGFDQ9GZP0 370 aaPredicted RBP22.6■■□□□ 1.21
CHMP2B-205ENST00000494980 PHF8Q9UPP1 1060 aa22.6■■□□□ 1.21
CHMP2B-205ENST00000494980 DLC1Q96QB1 1528 aa22.6■■□□□ 1.21
CHMP2B-205ENST00000494980 RGPD3A6NKT7 1758 aaPredicted RBP22.59■■□□□ 1.21
CHMP2B-205ENST00000494980 RGPD4Q7Z3J3 1758 aa22.59■■□□□ 1.21
CHMP2B-205ENST00000494980 NRXN1Q9ULB1 1477 aa22.59■■□□□ 1.21
CHMP2B-205ENST00000494980 SPATA31A1Q5TZJ5 1347 aa22.58■■□□□ 1.21
CHMP2B-205ENST00000494980 PPLO60437 1756 aa22.58■■□□□ 1.21
CHMP2B-205ENST00000494980 ANO8Q9HCE9 1232 aaPredicted RBP22.58■■□□□ 1.21
CHMP2B-205ENST00000494980 SHANK3Q9BYB0 1731 aa22.57■■□□□ 1.2
CHMP2B-205ENST00000494980 PLEKHH1Q9ULM0 1364 aa22.57■■□□□ 1.2
CHMP2B-205ENST00000494980 KNDC1Q76NI1 1749 aa22.56■■□□□ 1.2
CHMP2B-205ENST00000494980 TRPM3Q9HCF6 1732 aaPredicted RBP22.56■■□□□ 1.2
CHMP2B-205ENST00000494980 TECPR2O15040 1411 aa22.56■■□□□ 1.2
CHMP2B-205ENST00000494980 CRYBG1Q9Y4K1 1723 aa22.55■■□□□ 1.2
CHMP2B-205ENST00000494980 STK26Q9P289 416 aa22.55■■□□□ 1.2
CHMP2B-205ENST00000494980 ALS2Q96Q42 1657 aa22.55■■□□□ 1.2
CHMP2B-205ENST00000494980 PDE3BQ13370 1112 aa22.54■■□□□ 1.2
CHMP2B-205ENST00000494980 ATF5Q9Y2D1 282 aaPredicted RBP22.54■■□□□ 1.2
CHMP2B-205ENST00000494980 PRDM11Q9NQV5 511 aa22.49■■□□□ 1.19
CHMP2B-205ENST00000494980 STRN4Q9NRL3 753 aa22.48■■□□□ 1.19
CHMP2B-205ENST00000494980 USP35Q9P2H5 1018 aa22.48■■□□□ 1.19
CHMP2B-205ENST00000494980 SBF2Q86WG5 1849 aa22.47■■□□□ 1.19
CHMP2B-205ENST00000494980 ROCK1Q13464 1354 aa22.47■■□□□ 1.19
CHMP2B-205ENST00000494980 APLP2Q06481 763 aa22.45■■□□□ 1.18
CHMP2B-205ENST00000494980 GPR162Q16538 588 aa22.44■■□□□ 1.18
CHMP2B-205ENST00000494980 BCL11BQ9C0K0 894 aaPredicted RBP22.44■■□□□ 1.18
CHMP2B-205ENST00000494980 ABCC11Q96J66 1382 aa22.43■■□□□ 1.18
CHMP2B-205ENST00000494980 RPGRIP1LQ68CZ1 1315 aa22.43■■□□□ 1.18
CHMP2B-205ENST00000494980 PMFBP1Q8TBY8 1022 aa22.43■■□□□ 1.18
CHMP2B-205ENST00000494980 BARGINQ6ZT62 677 aa22.42■■□□□ 1.18
CHMP2B-205ENST00000494980 PEAK1Q9H792 1746 aa22.42■■□□□ 1.18
CHMP2B-205ENST00000494980 KIAA0232Q92628 1395 aa22.41■■□□□ 1.18
CHMP2B-205ENST00000494980 PARP4Q9UKK3 1724 aaKnown RBP22.41■■□□□ 1.18
CHMP2B-205ENST00000494980 SGIP1Q9BQI5 828 aa22.41■■□□□ 1.18
CHMP2B-205ENST00000494980 MAP3K5Q99683 1374 aa22.4■■□□□ 1.18
CHMP2B-205ENST00000494980 PLSCR1O15162 318 aa22.4■■□□□ 1.18
CHMP2B-205ENST00000494980 HSPA6P17066 643 aa22.4■■□□□ 1.18
CHMP2B-205ENST00000494980 CHRNA2Q15822 529 aa22.4■■□□□ 1.18
CHMP2B-205ENST00000494980 MTFR1LQ9H019 292 aa22.39■■□□□ 1.17
CHMP2B-205ENST00000494980 SSH2Q76I76 1423 aa22.38■■□□□ 1.17
CHMP2B-205ENST00000494980 PHRF1Q9P1Y6 1649 aaKnown RBP22.38■■□□□ 1.17
CHMP2B-205ENST00000494980 TMEM132EQ6IEE7 984 aa22.37■■□□□ 1.17
CHMP2B-205ENST00000494980 ARXQ96QS3 562 aa22.37■■□□□ 1.17
CHMP2B-205ENST00000494980 OVOS2A0A0G2JMS6 1433 aa22.36■■□□□ 1.17
CHMP2B-205ENST00000494980 OVOS2A0A0J9YW53 1432 aa22.36■■□□□ 1.17
CHMP2B-205ENST00000494980 OVOS2Q6IE36 1432 aa22.36■■□□□ 1.17
CHMP2B-205ENST00000494980 CAPN15O75808 1086 aa22.35■■□□□ 1.17
CHMP2B-205ENST00000494980 GPRASP1Q5JY77 1395 aa22.35■■□□□ 1.17
CHMP2B-205ENST00000494980 ADGRF5Q8IZF2 1346 aa22.34■■□□□ 1.17
CHMP2B-205ENST00000494980 YTHDC2Q9H6S0 1430 aaKnown RBP22.34■■□□□ 1.17
CHMP2B-205ENST00000494980 PELP1Q8IZL8 1130 aaKnown RBP22.34■■□□□ 1.17
CHMP2B-205ENST00000494980 STK32BQ9NY57 414 aa22.34■■□□□ 1.17
CHMP2B-205ENST00000494980 ANKARQ7Z5J8 1434 aa22.33■■□□□ 1.17
CHMP2B-205ENST00000494980 PROM2Q8N271 834 aa22.33■■□□□ 1.17
CHMP2B-205ENST00000494980 TCP11L2Q8N4U5 519 aa22.33■■□□□ 1.17
CHMP2B-205ENST00000494980 C11orf95C9JLR9 678 aaPredicted RBP22.32■■□□□ 1.16
CHMP2B-205ENST00000494980 EVA1CP58658 441 aa22.31■■□□□ 1.16
CHMP2B-205ENST00000494980 PTF1AQ7RTS3 328 aa22.31■■□□□ 1.16
CHMP2B-205ENST00000494980 ATP10DQ9P241 1426 aa22.31■■□□□ 1.16
CHMP2B-205ENST00000494980 ACIN1Q9UKV3 1341 aaKnown RBP22.31■■□□□ 1.16
CHMP2B-205ENST00000494980 SLC15A2Q16348 729 aa22.3■■□□□ 1.16
CHMP2B-205ENST00000494980 LARP1Q6PKG0 1096 aaKnown RBP22.3■■□□□ 1.16
CHMP2B-205ENST00000494980 LRRC37A3O60309 1634 aa22.29■■□□□ 1.16
CHMP2B-205ENST00000494980 PAK3O75914 559 aaPredicted RBP22.28■■□□□ 1.16
CHMP2B-205ENST00000494980 ZC3H6P61129 1189 aaKnown RBP22.28■■□□□ 1.16
CHMP2B-205ENST00000494980 ATP7BP35670 1465 aa22.27■■□□□ 1.16
CHMP2B-205ENST00000494980 SAFB2Q14151 953 aaKnown RBP eCLIP22.26■■□□□ 1.15
CHMP2B-205ENST00000494980 KLHL34Q8N239 644 aa22.26■■□□□ 1.15
CHMP2B-205ENST00000494980 LMO7Q8WWI1 1683 aa22.25■■□□□ 1.15
CHMP2B-205ENST00000494980 SIRT1Q96EB6 747 aa22.24■■□□□ 1.15
CHMP2B-205ENST00000494980 TXNRD1Q16881 649 aa22.23■■□□□ 1.15
CHMP2B-205ENST00000494980 GPBP1L1Q9HC44 474 aaPredicted RBP22.23■■□□□ 1.15
CHMP2B-205ENST00000494980 THRAP3Q9Y2W1 955 aaKnown RBP22.23■■□□□ 1.15
CHMP2B-205ENST00000494980 AKAP12Q02952 1782 aa22.22■■□□□ 1.15
CHMP2B-205ENST00000494980 TOPAZ1Q8N9V7 1692 aa22.22■■□□□ 1.15
CHMP2B-205ENST00000494980 PIK3C2GO75747 1445 aa22.22■■□□□ 1.15
CHMP2B-205ENST00000494980 ITGAEP38570 1179 aa22.21■■□□□ 1.15
CHMP2B-205ENST00000494980 DHX57Q6P158 1386 aaKnown RBP22.21■■□□□ 1.15
CHMP2B-205ENST00000494980 PCNTO95613 3336 aa22.21■■□□□ 1.15
CHMP2B-205ENST00000494980 COL13A1Q5TAT6 717 aaPredicted RBP22.19■■□□□ 1.14
CHMP2B-205ENST00000494980 PRAM1Q96QH2 718 aa22.19■■□□□ 1.14
CHMP2B-205ENST00000494980 SLC34A2O95436 690 aa22.18■■□□□ 1.14
CHMP2B-205ENST00000494980 WNK3Q9BYP7 1800 aa22.17■■□□□ 1.14
CHMP2B-205ENST00000494980 PAPPAQ13219 1627 aa22.17■■□□□ 1.14
CHMP2B-205ENST00000494980 PRR36Q9H6K5 1346 aa22.17■■□□□ 1.14
CHMP2B-205ENST00000494980 YBX3P16989 372 aaKnown RBP eCLIP22.16■■□□□ 1.14
CHMP2B-205ENST00000494980 PRELPP51888 382 aa22.16■■□□□ 1.14
CHMP2B-205ENST00000494980 NUTM2GQ5VZR2 741 aa22.16■■□□□ 1.14
CHMP2B-205ENST00000494980 NGDNQ8NEJ9 315 aaKnown RBP22.16■■□□□ 1.14
CHMP2B-205ENST00000494980 NLGN2Q8NFZ4 835 aa22.16■■□□□ 1.14
CHMP2B-205ENST00000494980 ZNF526Q8TF50 670 aaPredicted RBP22.16■■□□□ 1.14
CHMP2B-205ENST00000494980 TULP4Q9NRJ4 1543 aa22.16■■□□□ 1.14
CHMP2B-205ENST00000494980 ANKRD30BQ9BXX2 1392 aa22.15■■□□□ 1.14
CHMP2B-205ENST00000494980 COL5A2P05997 1499 aaPredicted RBP22.15■■□□□ 1.14
CHMP2B-205ENST00000494980 GRIN3BO60391 1043 aa22.14■■□□□ 1.13
CHMP2B-205ENST00000494980 DDB1Q16531 1140 aa22.14■■□□□ 1.13
CHMP2B-205ENST00000494980 COL24A1Q17RW2 1714 aa22.14■■□□□ 1.13
CHMP2B-205ENST00000494980 AATKQ6ZMQ8 1374 aa22.13■■□□□ 1.13
CHMP2B-205ENST00000494980 LOC105371045A0A1W2PR82 267 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms