RNA–Protein interactions for RNA: ENST00000494939.1

MKRN1-213, Transcript of makorin ring finger protein 1, humanhuman

TSL 3

Gene MKRN1, Length 784 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-213ENST00000494939 CRYBG1Q9Y4K1 1723 aa11.9□□□□□ -0.5
MKRN1-213ENST00000494939 SLIT2O94813 1529 aa11.9□□□□□ -0.5
MKRN1-213ENST00000494939 POLR3AO14802 1390 aaPredicted RBP11.9□□□□□ -0.5
MKRN1-213ENST00000494939 RGS12O14924 1447 aa11.89□□□□□ -0.51
MKRN1-213ENST00000494939 QTRT2Q9H974 415 aaKnown RBP11.89□□□□□ -0.51
MKRN1-213ENST00000494939 PLCH1Q4KWH8 1693 aa11.88□□□□□ -0.51
MKRN1-213ENST00000494939 PPIP5K1Q6PFW1 1433 aa11.88□□□□□ -0.51
MKRN1-213ENST00000494939 RBM6P78332 1123 aaKnown RBP11.88□□□□□ -0.51
MKRN1-213ENST00000494939 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
MKRN1-213ENST00000494939 CABLES1Q8TDN4 633 aa11.88□□□□□ -0.51
MKRN1-213ENST00000494939 CCDC61Q9Y6R9 512 aa11.88□□□□□ -0.51
MKRN1-213ENST00000494939 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
MKRN1-213ENST00000494939 SRPK2P78362 688 aaKnown RBP11.87□□□□□ -0.51
MKRN1-213ENST00000494939 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
MKRN1-213ENST00000494939 CABP2Q9NPB3 220 aa11.87□□□□□ -0.51
MKRN1-213ENST00000494939 TRPC5Q9UL62 973 aaPredicted RBP11.87□□□□□ -0.51
MKRN1-213ENST00000494939 ACEP12821 1306 aa11.86□□□□□ -0.51
MKRN1-213ENST00000494939 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
MKRN1-213ENST00000494939 NWD2Q9ULI1 1742 aa11.86□□□□□ -0.51
MKRN1-213ENST00000494939 SBNO2Q9Y2G9 1366 aa11.85□□□□□ -0.51
MKRN1-213ENST00000494939 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
MKRN1-213ENST00000494939 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
MKRN1-213ENST00000494939 HAP1P54257 671 aaPredicted RBP11.85□□□□□ -0.51
MKRN1-213ENST00000494939 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
MKRN1-213ENST00000494939 PCGF6Q9BYE7 350 aa11.85□□□□□ -0.51
MKRN1-213ENST00000494939 EVC2Q86UK5 1308 aa11.85□□□□□ -0.51
MKRN1-213ENST00000494939 NRAPQ86VF7 1730 aa11.84□□□□□ -0.51
MKRN1-213ENST00000494939 UNC5CLQ8IV45 518 aa11.84□□□□□ -0.51
MKRN1-213ENST00000494939 COL14A1Q05707 1796 aaKnown RBP11.84□□□□□ -0.51
MKRN1-213ENST00000494939 GLI3P10071 1580 aa11.84□□□□□ -0.51
MKRN1-213ENST00000494939 NRKQ7Z2Y5 1582 aa11.83□□□□□ -0.52
MKRN1-213ENST00000494939 BRD4O60885 1362 aaPredicted RBP11.82□□□□□ -0.52
MKRN1-213ENST00000494939 USP6P35125 1406 aa11.82□□□□□ -0.52
MKRN1-213ENST00000494939 FAM83GA6ND36 823 aa11.81□□□□□ -0.52
MKRN1-213ENST00000494939 GJD4Q96KN9 370 aaPredicted RBP11.81□□□□□ -0.52
MKRN1-213ENST00000494939 CABP1Q9NZU7 370 aa11.81□□□□□ -0.52
MKRN1-213ENST00000494939 AKAP12Q02952 1782 aa11.81□□□□□ -0.52
MKRN1-213ENST00000494939 ATAD2Q6PL18 1390 aa11.8□□□□□ -0.52
MKRN1-213ENST00000494939 SSH2Q76I76 1423 aa11.8□□□□□ -0.52
MKRN1-213ENST00000494939 USP19O94966 1318 aa11.8□□□□□ -0.52
MKRN1-213ENST00000494939 CLSPNQ9HAW4 1339 aa11.8□□□□□ -0.52
MKRN1-213ENST00000494939 PIK3C2AO00443 1686 aa11.79□□□□□ -0.52
MKRN1-213ENST00000494939 VPS72Q15906 364 aa11.79□□□□□ -0.52
MKRN1-213ENST00000494939 UPF1Q92900 1129 aaKnown RBP eCLIP11.79□□□□□ -0.52
MKRN1-213ENST00000494939 KIAA0232Q92628 1395 aa11.79□□□□□ -0.52
MKRN1-213ENST00000494939 MON2Q7Z3U7 1717 aa11.78□□□□□ -0.52
MKRN1-213ENST00000494939 SLIT3O75094 1523 aa11.78□□□□□ -0.52
MKRN1-213ENST00000494939 NUTM2GQ5VZR2 741 aa11.78□□□□□ -0.52
MKRN1-213ENST00000494939 ABTB2Q8N961 1025 aa11.78□□□□□ -0.52
MKRN1-213ENST00000494939 BTG4Q9NY30 223 aa11.78□□□□□ -0.52
MKRN1-213ENST00000494939 CPSF1Q10570 1443 aaKnown RBP11.77□□□□□ -0.52
MKRN1-213ENST00000494939 PRDM11Q9NQV5 511 aa11.77□□□□□ -0.53
MKRN1-213ENST00000494939 LMO7Q8WWI1 1683 aa11.77□□□□□ -0.53
MKRN1-213ENST00000494939 CD163L1Q9NR16 1453 aa11.76□□□□□ -0.53
MKRN1-213ENST00000494939 EP400Q96L91 3159 aa11.76□□□□□ -0.53
MKRN1-213ENST00000494939 CPDO75976 1380 aa11.76□□□□□ -0.53
MKRN1-213ENST00000494939 NLRP13Q86W25 1043 aa11.75□□□□□ -0.53
MKRN1-213ENST00000494939 TESK2Q96S53 571 aa11.75□□□□□ -0.53
MKRN1-213ENST00000494939 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
MKRN1-213ENST00000494939 TIMELESSQ9UNS1 1208 aa11.75□□□□□ -0.53
MKRN1-213ENST00000494939 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
MKRN1-213ENST00000494939 ST20-MTHFSA0A0A6YYL1 179 aa11.74□□□□□ -0.53
MKRN1-213ENST00000494939 ZC3H6P61129 1189 aaKnown RBP11.74□□□□□ -0.53
MKRN1-213ENST00000494939 CHRNA2Q15822 529 aa11.74□□□□□ -0.53
MKRN1-213ENST00000494939 CCDC9Q9Y3X0 531 aaKnown RBP11.74□□□□□ -0.53
MKRN1-213ENST00000494939 TTC21BQ7Z4L5 1316 aa11.74□□□□□ -0.53
MKRN1-213ENST00000494939 KTN1Q86UP2 1357 aaKnown RBP11.74□□□□□ -0.53
MKRN1-213ENST00000494939 USP47Q96K76 1375 aa11.74□□□□□ -0.53
MKRN1-213ENST00000494939 USP54Q70EL1 1684 aa11.74□□□□□ -0.53
MKRN1-213ENST00000494939 ONECUT3O60422 494 aaPredicted RBP11.73□□□□□ -0.53
MKRN1-213ENST00000494939 GCP02774 474 aa11.73□□□□□ -0.53
MKRN1-213ENST00000494939 NLRP6P59044 892 aa11.73□□□□□ -0.53
MKRN1-213ENST00000494939 SPATA31A5Q5VU36 1347 aa11.73□□□□□ -0.53
MKRN1-213ENST00000494939 SPATA31A7Q8IWB4 1347 aa11.73□□□□□ -0.53
MKRN1-213ENST00000494939 TTC21AQ8NDW8 1320 aa11.73□□□□□ -0.53
MKRN1-213ENST00000494939 PUS7Q96PZ0 661 aaKnown RBP11.73□□□□□ -0.53
MKRN1-213ENST00000494939 THSD7AQ9UPZ6 1657 aa11.73□□□□□ -0.53
MKRN1-213ENST00000494939 CAMTA1Q9Y6Y1 1673 aa11.73□□□□□ -0.53
MKRN1-213ENST00000494939 SEPT12Q8IYM1 358 aa11.72□□□□□ -0.53
MKRN1-213ENST00000494939 A0A1W2PP64 1363 aa11.71□□□□□ -0.53
MKRN1-213ENST00000494939 NINLQ9Y2I6 1382 aa11.71□□□□□ -0.53
MKRN1-213ENST00000494939 NFAT5O94916 1531 aa11.7□□□□□ -0.54
MKRN1-213ENST00000494939 COL5A2P05997 1499 aaPredicted RBP11.7□□□□□ -0.54
MKRN1-213ENST00000494939 COL18A1P39060 1754 aa11.7□□□□□ -0.54
MKRN1-213ENST00000494939 SPATA31A1Q5TZJ5 1347 aa11.7□□□□□ -0.54
MKRN1-213ENST00000494939 FAM98CQ17RN3 349 aaKnown RBP11.7□□□□□ -0.54
MKRN1-213ENST00000494939 TMC1Q8TDI8 760 aa11.7□□□□□ -0.54
MKRN1-213ENST00000494939 SLC12A5Q9H2X9 1139 aa11.7□□□□□ -0.54
MKRN1-213ENST00000494939 STRN4Q9NRL3 753 aa11.7□□□□□ -0.54
MKRN1-213ENST00000494939 EDC4Q6P2E9 1401 aaKnown RBP11.69□□□□□ -0.54
MKRN1-213ENST00000494939 AATKQ6ZMQ8 1374 aa11.69□□□□□ -0.54
MKRN1-213ENST00000494939 USP31Q70CQ4 1352 aa11.69□□□□□ -0.54
MKRN1-213ENST00000494939 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
MKRN1-213ENST00000494939 CCER1Q8TC90 406 aaPredicted RBP11.69□□□□□ -0.54
MKRN1-213ENST00000494939 NPM3O75607 178 aaKnown RBP11.68□□□□□ -0.54
MKRN1-213ENST00000494939 HDGFL2Q7Z4V5 671 aaPredicted RBP11.68□□□□□ -0.54
MKRN1-213ENST00000494939 ABCC6O95255 1503 aa11.68□□□□□ -0.54
MKRN1-213ENST00000494939 A0A0G2JS52 829 aa11.67□□□□□ -0.54
MKRN1-213ENST00000494939 TMF1P82094 1093 aa11.67□□□□□ -0.54
MKRN1-213ENST00000494939 MYT1Q01538 1121 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms