RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 IQSEC2Q5JU85 1478 aa13.62□□□□□ -0.23
SAMM50-206ENST00000494795 PLEKHF1Q96S99 279 aa13.62□□□□□ -0.23
SAMM50-206ENST00000494795 CFAP53Q96M91 514 aa13.62□□□□□ -0.23
SAMM50-206ENST00000494795 CPS1P31327 1500 aa13.61□□□□□ -0.23
SAMM50-206ENST00000494795 SOX12O15370 315 aa13.61□□□□□ -0.23
SAMM50-206ENST00000494795 HMOX1P09601 288 aa13.61□□□□□ -0.23
SAMM50-206ENST00000494795 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
SAMM50-206ENST00000494795 E9PSI1 815 aa13.6□□□□□ -0.23
SAMM50-206ENST00000494795 C3P01024 1663 aa13.6□□□□□ -0.23
SAMM50-206ENST00000494795 DLC1Q96QB1 1528 aa13.6□□□□□ -0.23
SAMM50-206ENST00000494795 NKTRP30414 1462 aaKnown RBP13.6□□□□□ -0.23
SAMM50-206ENST00000494795 NSD2O96028 1365 aa13.59□□□□□ -0.23
SAMM50-206ENST00000494795 PMFBP1Q8TBY8 1022 aa13.59□□□□□ -0.23
SAMM50-206ENST00000494795 PANK1Q8TE04 598 aa13.59□□□□□ -0.23
SAMM50-206ENST00000494795 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.59□□□□□ -0.23
SAMM50-206ENST00000494795 FRAT1Q92837 279 aaPredicted RBP13.58□□□□□ -0.23
SAMM50-206ENST00000494795 PHACTR3Q96KR7 559 aa13.58□□□□□ -0.23
SAMM50-206ENST00000494795 TRIM35Q9UPQ4 493 aa13.58□□□□□ -0.23
SAMM50-206ENST00000494795 AMOTL2Q9Y2J4 779 aa13.58□□□□□ -0.23
SAMM50-206ENST00000494795 NINLQ9Y2I6 1382 aa13.58□□□□□ -0.24
SAMM50-206ENST00000494795 THUMPD2Q9BTF0 503 aaKnown RBP13.58□□□□□ -0.24
SAMM50-206ENST00000494795 CPSF1Q10570 1443 aaKnown RBP13.58□□□□□ -0.24
SAMM50-206ENST00000494795 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
SAMM50-206ENST00000494795 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
SAMM50-206ENST00000494795 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
SAMM50-206ENST00000494795 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
SAMM50-206ENST00000494795 RLBP1P12271 317 aa13.56□□□□□ -0.24
SAMM50-206ENST00000494795 ATP7BP35670 1465 aa13.56□□□□□ -0.24
SAMM50-206ENST00000494795 CLUAP1Q96AJ1 413 aa13.56□□□□□ -0.24
SAMM50-206ENST00000494795 COG6Q9Y2V7 657 aa13.55□□□□□ -0.24
SAMM50-206ENST00000494795 ACEP12821 1306 aa13.55□□□□□ -0.24
SAMM50-206ENST00000494795 PLEKHG1Q9ULL1 1385 aa13.55□□□□□ -0.24
SAMM50-206ENST00000494795 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
SAMM50-206ENST00000494795 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
SAMM50-206ENST00000494795 PRKAR2BP31323 418 aa13.54□□□□□ -0.24
SAMM50-206ENST00000494795 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
SAMM50-206ENST00000494795 TECPR2O15040 1411 aa13.54□□□□□ -0.24
SAMM50-206ENST00000494795 HDGFP51858 240 aaKnown RBP13.54□□□□□ -0.24
SAMM50-206ENST00000494795 RARSP54136 660 aaKnown RBP13.54□□□□□ -0.24
SAMM50-206ENST00000494795 FER1L4A9Z1Z3 1794 aa13.54□□□□□ -0.24
SAMM50-206ENST00000494795 PNPLA6Q8IY17 1366 aa13.54□□□□□ -0.24
SAMM50-206ENST00000494795 RIPK4P57078 832 aa13.54□□□□□ -0.24
SAMM50-206ENST00000494795 KCNA6P17658 529 aa13.53□□□□□ -0.24
SAMM50-206ENST00000494795 BCL11AQ9H165 835 aa13.53□□□□□ -0.24
SAMM50-206ENST00000494795 ANKRD26Q9UPS8 1709 aa13.53□□□□□ -0.24
SAMM50-206ENST00000494795 EID1Q9Y6B2 187 aa13.53□□□□□ -0.24
SAMM50-206ENST00000494795 FAM135BQ49AJ0 1406 aa13.53□□□□□ -0.24
SAMM50-206ENST00000494795 MED14O60244 1454 aa13.52□□□□□ -0.24
SAMM50-206ENST00000494795 EXOSC9Q06265 439 aaKnown RBP13.52□□□□□ -0.24
SAMM50-206ENST00000494795 NUTM2GQ5VZR2 741 aa13.52□□□□□ -0.24
SAMM50-206ENST00000494795 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.24
SAMM50-206ENST00000494795 IGHDP01880 384 aa13.52□□□□□ -0.25
SAMM50-206ENST00000494795 AEBP1Q8IUX7 1158 aa13.52□□□□□ -0.25
SAMM50-206ENST00000494795 FANCIQ9NVI1 1328 aa13.52□□□□□ -0.25
SAMM50-206ENST00000494795 FAM83GA6ND36 823 aa13.51□□□□□ -0.25
SAMM50-206ENST00000494795 EDC4Q6P2E9 1401 aaKnown RBP13.51□□□□□ -0.25
SAMM50-206ENST00000494795 KDM2BQ8NHM5 1336 aa13.51□□□□□ -0.25
SAMM50-206ENST00000494795 IL13P35225 146 aa13.51□□□□□ -0.25
SAMM50-206ENST00000494795 DCTN1Q14203 1278 aa13.51□□□□□ -0.25
SAMM50-206ENST00000494795 WDR63Q8IWG1 891 aa13.51□□□□□ -0.25
SAMM50-206ENST00000494795 LAS1LQ9Y4W2 734 aaKnown RBP13.51□□□□□ -0.25
SAMM50-206ENST00000494795 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
SAMM50-206ENST00000494795 LRRC7Q96NW7 1537 aa13.5□□□□□ -0.25
SAMM50-206ENST00000494795 MAPK8IP3Q9UPT6 1336 aa13.5□□□□□ -0.25
SAMM50-206ENST00000494795 COG3Q96JB2 828 aa13.5□□□□□ -0.25
SAMM50-206ENST00000494795 CDC42BPGQ6DT37 1551 aa13.5□□□□□ -0.25
SAMM50-206ENST00000494795 KNDC1Q76NI1 1749 aa13.49□□□□□ -0.25
SAMM50-206ENST00000494795 TTC21BQ7Z4L5 1316 aa13.49□□□□□ -0.25
SAMM50-206ENST00000494795 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
SAMM50-206ENST00000494795 CANXP27824 592 aaKnown RBP13.49□□□□□ -0.25
SAMM50-206ENST00000494795 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
SAMM50-206ENST00000494795 ERICH6Q7L0X2 663 aa13.49□□□□□ -0.25
SAMM50-206ENST00000494795 RGPD8O14715 1765 aaPredicted RBP13.49□□□□□ -0.25
SAMM50-206ENST00000494795 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
SAMM50-206ENST00000494795 HSP90AB2PQ58FF8 381 aa13.49□□□□□ -0.25
SAMM50-206ENST00000494795 THEMISQ8N1K5 641 aaPredicted RBP13.49□□□□□ -0.25
SAMM50-206ENST00000494795 ARHGAP23Q9P227 1491 aa13.48□□□□□ -0.25
SAMM50-206ENST00000494795 SIRT1Q96EB6 747 aa13.48□□□□□ -0.25
SAMM50-206ENST00000494795 ELL2O00472 640 aaPredicted RBP13.48□□□□□ -0.25
SAMM50-206ENST00000494795 NPM2Q86SE8 214 aaKnown RBP13.47□□□□□ -0.25
SAMM50-206ENST00000494795 SLIT1O75093 1534 aa13.47□□□□□ -0.25
SAMM50-206ENST00000494795 RGS3P49796 1198 aa13.47□□□□□ -0.25
SAMM50-206ENST00000494795 TBX22Q9Y458 520 aa13.47□□□□□ -0.25
SAMM50-206ENST00000494795 MON2Q7Z3U7 1717 aa13.46□□□□□ -0.25
SAMM50-206ENST00000494795 RIMS1Q86UR5 1692 aaKnown RBP13.46□□□□□ -0.26
SAMM50-206ENST00000494795 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.26
SAMM50-206ENST00000494795 TSPYL6Q8N831 410 aa13.46□□□□□ -0.26
SAMM50-206ENST00000494795 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.26
SAMM50-206ENST00000494795 SSH1Q8WYL5 1049 aa13.46□□□□□ -0.26
SAMM50-206ENST00000494795 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
SAMM50-206ENST00000494795 FCHSD2O94868 740 aa13.45□□□□□ -0.26
SAMM50-206ENST00000494795 PDE4AP27815 886 aa13.45□□□□□ -0.26
SAMM50-206ENST00000494795 EIF4A2Q14240 407 aaKnown RBP13.45□□□□□ -0.26
SAMM50-206ENST00000494795 PCDHB15Q9Y5E8 787 aa13.45□□□□□ -0.26
SAMM50-206ENST00000494795 AKAP12Q02952 1782 aa13.44□□□□□ -0.26
SAMM50-206ENST00000494795 USP6P35125 1406 aa13.44□□□□□ -0.26
SAMM50-206ENST00000494795 NGEFQ8N5V2 710 aa13.44□□□□□ -0.26
SAMM50-206ENST00000494795 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
SAMM50-206ENST00000494795 PLEKHG3A1L390 1219 aa13.44□□□□□ -0.26
SAMM50-206ENST00000494795 NGDNQ8NEJ9 315 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms