RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 TMC1Q8TDI8 760 aa10.23□□□□□ -0.77
RBM39-239ENST00000494274 ST20-MTHFSA0A0A6YYL1 179 aa10.22□□□□□ -0.77
RBM39-239ENST00000494274 A0A0G2JS52 829 aa10.22□□□□□ -0.77
RBM39-239ENST00000494274 ZBTB7CA1YPR0 619 aa10.22□□□□□ -0.77
RBM39-239ENST00000494274 NLRP6P59044 892 aa10.22□□□□□ -0.77
RBM39-239ENST00000494274 MYT1Q01538 1121 aa10.22□□□□□ -0.77
RBM39-239ENST00000494274 VPS72Q15906 364 aa10.22□□□□□ -0.77
RBM39-239ENST00000494274 POLR3AO14802 1390 aaPredicted RBP10.22□□□□□ -0.77
RBM39-239ENST00000494274 KIF1AQ12756 1690 aa10.22□□□□□ -0.77
RBM39-239ENST00000494274 ZNF692Q9BU19 519 aaPredicted RBP10.21□□□□□ -0.77
RBM39-239ENST00000494274 STRN4Q9NRL3 753 aa10.21□□□□□ -0.77
RBM39-239ENST00000494274 ATRNO75882 1429 aa10.21□□□□□ -0.78
RBM39-239ENST00000494274 USP32Q8NFA0 1604 aa10.21□□□□□ -0.78
RBM39-239ENST00000494274 RGS12O14924 1447 aa10.2□□□□□ -0.78
RBM39-239ENST00000494274 GCP02774 474 aa10.2□□□□□ -0.78
RBM39-239ENST00000494274 EVA1CP58658 441 aa10.2□□□□□ -0.78
RBM39-239ENST00000494274 SEPT12Q8IYM1 358 aa10.2□□□□□ -0.78
RBM39-239ENST00000494274 ARHGEF28Q8N1W1 1705 aaKnown RBP10.19□□□□□ -0.78
RBM39-239ENST00000494274 KIAA1210Q9ULL0 1709 aa10.19□□□□□ -0.78
RBM39-239ENST00000494274 SLIT2O94813 1529 aa10.19□□□□□ -0.78
RBM39-239ENST00000494274 KIAA0232Q92628 1395 aa10.19□□□□□ -0.78
RBM39-239ENST00000494274 SOX12O15370 315 aa10.19□□□□□ -0.78
RBM39-239ENST00000494274 SLC12A5Q9H2X9 1139 aa10.19□□□□□ -0.78
RBM39-239ENST00000494274 TIMELESSQ9UNS1 1208 aa10.19□□□□□ -0.78
RBM39-239ENST00000494274 COL22A1Q8NFW1 1626 aaPredicted RBP10.18□□□□□ -0.78
RBM39-239ENST00000494274 CDK12Q9NYV4 1490 aaPredicted RBP10.18□□□□□ -0.78
RBM39-239ENST00000494274 FAM98CQ17RN3 349 aaKnown RBP10.18□□□□□ -0.78
RBM39-239ENST00000494274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.18□□□□□ -0.78
RBM39-239ENST00000494274 USP35Q9P2H5 1018 aa10.18□□□□□ -0.78
RBM39-239ENST00000494274 ATAD2Q6PL18 1390 aa10.17□□□□□ -0.78
RBM39-239ENST00000494274 TTC21BQ7Z4L5 1316 aa10.17□□□□□ -0.78
RBM39-239ENST00000494274 CLSPNQ9HAW4 1339 aa10.17□□□□□ -0.78
RBM39-239ENST00000494274 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
RBM39-239ENST00000494274 HDGFL2Q7Z4V5 671 aaPredicted RBP10.17□□□□□ -0.78
RBM39-239ENST00000494274 RALGAPBQ86X10 1494 aa10.17□□□□□ -0.78
RBM39-239ENST00000494274 USP6P35125 1406 aa10.16□□□□□ -0.78
RBM39-239ENST00000494274 RGPD8O14715 1765 aaPredicted RBP10.16□□□□□ -0.78
RBM39-239ENST00000494274 BRD4O60885 1362 aaPredicted RBP10.16□□□□□ -0.78
RBM39-239ENST00000494274 KTN1Q86UP2 1357 aaKnown RBP10.16□□□□□ -0.78
RBM39-239ENST00000494274 ONECUT3O60422 494 aaPredicted RBP10.16□□□□□ -0.78
RBM39-239ENST00000494274 TESK2Q96S53 571 aa10.16□□□□□ -0.78
RBM39-239ENST00000494274 TERF2IPQ9NYB0 399 aa10.16□□□□□ -0.78
RBM39-239ENST00000494274 TRPM1Q7Z4N2 1603 aa10.15□□□□□ -0.78
RBM39-239ENST00000494274 KRT27Q7Z3Y8 459 aa10.15□□□□□ -0.78
RBM39-239ENST00000494274 ZRANB1Q9UGI0 708 aa10.15□□□□□ -0.78
RBM39-239ENST00000494274 SBNO2Q9Y2G9 1366 aa10.14□□□□□ -0.79
RBM39-239ENST00000494274 USP19O94966 1318 aa10.14□□□□□ -0.79
RBM39-239ENST00000494274 SPATA31A5Q5VU36 1347 aa10.14□□□□□ -0.79
RBM39-239ENST00000494274 SPATA31A7Q8IWB4 1347 aa10.14□□□□□ -0.79
RBM39-239ENST00000494274 TMF1P82094 1093 aa10.14□□□□□ -0.79
RBM39-239ENST00000494274 LARP1Q6PKG0 1096 aaKnown RBP10.14□□□□□ -0.79
RBM39-239ENST00000494274 PUS7Q96PZ0 661 aaKnown RBP10.14□□□□□ -0.79
RBM39-239ENST00000494274 TTC21AQ8NDW8 1320 aa10.13□□□□□ -0.79
RBM39-239ENST00000494274 FAM182BQ5T319 152 aa10.13□□□□□ -0.79
RBM39-239ENST00000494274 NME9Q86XW9 330 aa10.13□□□□□ -0.79
RBM39-239ENST00000494274 KCNH5Q8NCM2 988 aa10.13□□□□□ -0.79
RBM39-239ENST00000494274 USP47Q96K76 1375 aa10.13□□□□□ -0.79
RBM39-239ENST00000494274 SPATA31A1Q5TZJ5 1347 aa10.12□□□□□ -0.79
RBM39-239ENST00000494274 SF3B2Q13435 895 aaKnown RBP10.12□□□□□ -0.79
RBM39-239ENST00000494274 CCDC125Q86Z20 511 aa10.12□□□□□ -0.79
RBM39-239ENST00000494274 CPSF1Q10570 1443 aaKnown RBP10.12□□□□□ -0.79
RBM39-239ENST00000494274 TRPM3Q9HCF6 1732 aaPredicted RBP10.11□□□□□ -0.79
RBM39-239ENST00000494274 SSH2Q76I76 1423 aa10.11□□□□□ -0.79
RBM39-239ENST00000494274 CSB-PGBD3P0DP91 1061 aa10.11□□□□□ -0.79
RBM39-239ENST00000494274 CDCA8Q53HL2 280 aa10.11□□□□□ -0.79
RBM39-239ENST00000494274 TOM1L2Q6ZVM7 507 aa10.11□□□□□ -0.79
RBM39-239ENST00000494274 ARHGEF25Q86VW2 580 aa10.11□□□□□ -0.79
RBM39-239ENST00000494274 POLR3GLQ9BT43 218 aa10.11□□□□□ -0.79
RBM39-239ENST00000494274 AXIN2Q9Y2T1 843 aa10.11□□□□□ -0.79
RBM39-239ENST00000494274 QRICH2Q9H0J4 1663 aa10.11□□□□□ -0.79
RBM39-239ENST00000494274 CPDO75976 1380 aa10.11□□□□□ -0.79
RBM39-239ENST00000494274 PDE3BQ13370 1112 aa10.1□□□□□ -0.79
RBM39-239ENST00000494274 TCP11L2Q8N4U5 519 aa10.1□□□□□ -0.79
RBM39-239ENST00000494274 ALS2Q96Q42 1657 aa10.09□□□□□ -0.79
RBM39-239ENST00000494274 AATKQ6ZMQ8 1374 aa10.09□□□□□ -0.79
RBM39-239ENST00000494274 GLI3P10071 1580 aa10.09□□□□□ -0.79
RBM39-239ENST00000494274 ITSN1Q15811 1721 aa10.08□□□□□ -0.8
RBM39-239ENST00000494274 EIF4G2P78344 907 aaKnown RBP eCLIP10.08□□□□□ -0.8
RBM39-239ENST00000494274 BARGINQ6ZT62 677 aa10.08□□□□□ -0.8
RBM39-239ENST00000494274 DEFB132Q7Z7B7 95 aa10.08□□□□□ -0.8
RBM39-239ENST00000494274 COG3Q96JB2 828 aa10.08□□□□□ -0.8
RBM39-239ENST00000494274 A0A1W2PP64 1363 aa10.08□□□□□ -0.8
RBM39-239ENST00000494274 TOPAZ1Q8N9V7 1692 aa10.07□□□□□ -0.8
RBM39-239ENST00000494274 FBLN1P23142 703 aa10.07□□□□□ -0.8
RBM39-239ENST00000494274 THRAP3Q9Y2W1 955 aaKnown RBP10.07□□□□□ -0.8
RBM39-239ENST00000494274 CAMTA1Q9Y6Y1 1673 aa10.06□□□□□ -0.8
RBM39-239ENST00000494274 CD163L1Q9NR16 1453 aa10.06□□□□□ -0.8
RBM39-239ENST00000494274 HSPA5P11021 654 aaKnown RBP10.06□□□□□ -0.8
RBM39-239ENST00000494274 FAM196AQ6ZSG2 479 aa10.06□□□□□ -0.8
RBM39-239ENST00000494274 GGNBP2Q9H3C7 697 aa10.06□□□□□ -0.8
RBM39-239ENST00000494274 NLRP2Q9NX02 1062 aa10.06□□□□□ -0.8
RBM39-239ENST00000494274 EDC4Q6P2E9 1401 aaKnown RBP10.06□□□□□ -0.8
RBM39-239ENST00000494274 COL14A1Q05707 1796 aaKnown RBP10.06□□□□□ -0.8
RBM39-239ENST00000494274 USP31Q70CQ4 1352 aa10.05□□□□□ -0.8
RBM39-239ENST00000494274 NINLQ9Y2I6 1382 aa10.05□□□□□ -0.8
RBM39-239ENST00000494274 TRIM37O94972 964 aa10.05□□□□□ -0.8
RBM39-239ENST00000494274 LTV1Q96GA3 475 aaPredicted RBP10.05□□□□□ -0.8
RBM39-239ENST00000494274 BLMP54132 1417 aaPredicted RBP10.05□□□□□ -0.8
RBM39-239ENST00000494274 WDR17Q8IZU2 1322 aa10.05□□□□□ -0.8
RBM39-239ENST00000494274 FYB1O15117 783 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms