RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 ANKLE1Q8NAG6 615 aa11.74□□□□□ -0.53
SMG7-208ENST00000493609 PTPRNQ16849 979 aa11.73□□□□□ -0.53
SMG7-208ENST00000493609 ABL2P42684 1182 aa11.72□□□□□ -0.53
SMG7-208ENST00000493609 SPRYD7Q5W111 196 aa11.72□□□□□ -0.53
SMG7-208ENST00000493609 LIAT1Q6ZQX7 453 aa11.72□□□□□ -0.53
SMG7-208ENST00000493609 MAP10Q9P2G4 905 aa11.72□□□□□ -0.53
SMG7-208ENST00000493609 NDUFB9Q9Y6M9 179 aa11.72□□□□□ -0.53
SMG7-208ENST00000493609 PROSER2Q86WR7 435 aaPredicted RBP11.71□□□□□ -0.53
SMG7-208ENST00000493609 NUDT12Q9BQG2 462 aa11.71□□□□□ -0.53
SMG7-208ENST00000493609 PRM3Q9NNZ6 103 aa11.71□□□□□ -0.53
SMG7-208ENST00000493609 F12P00748 615 aaPredicted RBP11.7□□□□□ -0.54
SMG7-208ENST00000493609 CCNYL3P0C7X3 344 aa11.7□□□□□ -0.54
SMG7-208ENST00000493609 CTHP32929 405 aa11.7□□□□□ -0.54
SMG7-208ENST00000493609 TRAK2O60296 914 aa11.69□□□□□ -0.54
SMG7-208ENST00000493609 FNBP4Q8N3X1 1017 aaPredicted RBP11.69□□□□□ -0.54
SMG7-208ENST00000493609 CCDC24Q8N4L8 307 aa11.69□□□□□ -0.54
SMG7-208ENST00000493609 EVA1BQ9NVM1 165 aa11.69□□□□□ -0.54
SMG7-208ENST00000493609 GPR37L1O60883 481 aa11.68□□□□□ -0.54
SMG7-208ENST00000493609 ZNF598Q86UK7 904 aaKnown RBP11.68□□□□□ -0.54
SMG7-208ENST00000493609 PLA2G2CQ5R387 149 aa11.67□□□□□ -0.54
SMG7-208ENST00000493609 KCNH2Q12809 1159 aa11.66□□□□□ -0.54
SMG7-208ENST00000493609 IRF5Q13568 498 aa11.66□□□□□ -0.54
SMG7-208ENST00000493609 ARID3CA6NKF2 412 aa11.65□□□□□ -0.54
SMG7-208ENST00000493609 PTCRAQ6ISU1 281 aaPredicted RBP11.65□□□□□ -0.54
SMG7-208ENST00000493609 FCF1Q9Y324 198 aaKnown RBP11.65□□□□□ -0.54
SMG7-208ENST00000493609 ZNF697Q5TEC3 545 aa11.64□□□□□ -0.55
SMG7-208ENST00000493609 ZNF777Q9ULD5 760 aaPredicted RBP11.63□□□□□ -0.55
SMG7-208ENST00000493609 ZNF330Q9Y3S2 320 aaPredicted RBP11.63□□□□□ -0.55
SMG7-208ENST00000493609 FKBPLQ9UIM3 349 aa11.62□□□□□ -0.55
SMG7-208ENST00000493609 PRR20EP86478 221 aa11.61□□□□□ -0.55
SMG7-208ENST00000493609 PRR20CP86479 221 aa11.61□□□□□ -0.55
SMG7-208ENST00000493609 PRR20DP86480 221 aa11.61□□□□□ -0.55
SMG7-208ENST00000493609 PRR20BP86481 221 aa11.61□□□□□ -0.55
SMG7-208ENST00000493609 PRR20AP86496 221 aa11.61□□□□□ -0.55
SMG7-208ENST00000493609 ZNF787Q6DD87 383 aa11.61□□□□□ -0.55
SMG7-208ENST00000493609 WWC1Q8IX03 1113 aa11.61□□□□□ -0.55
SMG7-208ENST00000493609 TNFRSF10AO00220 468 aa11.6□□□□□ -0.55
SMG7-208ENST00000493609 GDF9O60383 454 aa11.6□□□□□ -0.55
SMG7-208ENST00000493609 UNC93B1Q9H1C4 597 aa11.6□□□□□ -0.55
SMG7-208ENST00000493609 C1orf115Q9H7X2 142 aa11.6□□□□□ -0.55
SMG7-208ENST00000493609 POM121CA8CG34 1229 aa11.59□□□□□ -0.55
SMG7-208ENST00000493609 VAC14Q08AM6 782 aa11.59□□□□□ -0.55
SMG7-208ENST00000493609 PNMA1Q8ND90 353 aa11.59□□□□□ -0.55
SMG7-208ENST00000493609 PKDCCQ504Y2 493 aa11.58□□□□□ -0.56
SMG7-208ENST00000493609 DGAT1O75907 488 aa11.57□□□□□ -0.56
SMG7-208ENST00000493609 MYT1Q01538 1121 aa11.57□□□□□ -0.56
SMG7-208ENST00000493609 WASHC4Q2M389 1173 aa11.55□□□□□ -0.56
SMG7-208ENST00000493609 ARMC2Q8NEN0 867 aa11.55□□□□□ -0.56
SMG7-208ENST00000493609 BAP1Q92560 729 aa11.54□□□□□ -0.56
SMG7-208ENST00000493609 FAM187AA6NFU0 413 aa11.53□□□□□ -0.56
SMG7-208ENST00000493609 FBXO45P0C2W1 286 aa11.53□□□□□ -0.56
SMG7-208ENST00000493609 LINC01559Q495D7 138 aa11.53□□□□□ -0.56
SMG7-208ENST00000493609 PKD2L1Q9P0L9 805 aa11.53□□□□□ -0.56
SMG7-208ENST00000493609 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
SMG7-208ENST00000493609 FOXC1Q12948 553 aa11.52□□□□□ -0.57
SMG7-208ENST00000493609 NBPF14Q5TI25 921 aa11.52□□□□□ -0.57
SMG7-208ENST00000493609 PDXDC2PQ6P474 469 aa11.52□□□□□ -0.57
SMG7-208ENST00000493609 ZBBXA8MT70 800 aa11.51□□□□□ -0.57
SMG7-208ENST00000493609 NR1H3Q13133 447 aa11.51□□□□□ -0.57
SMG7-208ENST00000493609 ZBTB24O43167 697 aaPredicted RBP11.5□□□□□ -0.57
SMG7-208ENST00000493609 RPIAP49247 311 aa11.5□□□□□ -0.57
SMG7-208ENST00000493609 GPKOWQ92917 476 aaPredicted RBP eCLIP11.5□□□□□ -0.57
SMG7-208ENST00000493609 OCSTAMPQ9BR26 566 aa11.5□□□□□ -0.57
SMG7-208ENST00000493609 POTECB2RU33 542 aa11.49□□□□□ -0.57
SMG7-208ENST00000493609 PTK2Q05397 1052 aa11.49□□□□□ -0.57
SMG7-208ENST00000493609 HDGFL1Q5TGJ6 251 aa11.49□□□□□ -0.57
SMG7-208ENST00000493609 ADAMTS19Q8TE59 1207 aa11.49□□□□□ -0.57
SMG7-208ENST00000493609 GLMNQ92990 594 aa11.49□□□□□ -0.57
SMG7-208ENST00000493609 ARID3AQ99856 593 aa11.49□□□□□ -0.57
SMG7-208ENST00000493609 ZNF511Q8NB15 262 aa11.48□□□□□ -0.57
SMG7-208ENST00000493609 FOXJ1Q92949 421 aa11.48□□□□□ -0.57
SMG7-208ENST00000493609 ZNF775Q96BV0 537 aaPredicted RBP11.48□□□□□ -0.57
SMG7-208ENST00000493609 TRIM32Q13049 653 aa11.47□□□□□ -0.57
SMG7-208ENST00000493609 SH3BP5LQ7L8J4 393 aa11.47□□□□□ -0.57
SMG7-208ENST00000493609 CALR3Q96L12 384 aaKnown RBP11.47□□□□□ -0.57
SMG7-208ENST00000493609 ARHGAP9Q9BRR9 750 aa11.47□□□□□ -0.57
SMG7-208ENST00000493609 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
SMG7-208ENST00000493609 SH3BP2P78314 561 aa11.46□□□□□ -0.57
SMG7-208ENST00000493609 AGERQ15109 404 aa11.46□□□□□ -0.57
SMG7-208ENST00000493609 CCDC82Q8N4S0 544 aa11.46□□□□□ -0.57
SMG7-208ENST00000493609 GPSM3Q9Y4H4 160 aa11.46□□□□□ -0.57
SMG7-208ENST00000493609 MAGEB6P1A0A0J9YX57 407 aa11.45□□□□□ -0.58
SMG7-208ENST00000493609 ST8SIA5O15466 376 aa11.45□□□□□ -0.58
SMG7-208ENST00000493609 ADAM32Q8TC27 787 aa11.45□□□□□ -0.58
SMG7-208ENST00000493609 CARD14Q9BXL6 1004 aa11.45□□□□□ -0.58
SMG7-208ENST00000493609 ALG2Q9H553 416 aa11.45□□□□□ -0.58
SMG7-208ENST00000493609 EIF4G2P78344 907 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMG7-208ENST00000493609 C4orf48Q5BLP8 95 aa11.44□□□□□ -0.58
SMG7-208ENST00000493609 SH3RF1Q7Z6J0 888 aa11.44□□□□□ -0.58
SMG7-208ENST00000493609 SKOR1P84550 965 aa11.43□□□□□ -0.58
SMG7-208ENST00000493609 SEMA3FQ13275 785 aa11.43□□□□□ -0.58
SMG7-208ENST00000493609 ZBTB33Q86T24 672 aa11.43□□□□□ -0.58
SMG7-208ENST00000493609 BPHLQ86WA6 291 aaPredicted RBP11.43□□□□□ -0.58
SMG7-208ENST00000493609 AAASQ9NRG9 546 aa11.43□□□□□ -0.58
SMG7-208ENST00000493609 TOR4AQ9NXH8 423 aa11.42□□□□□ -0.58
SMG7-208ENST00000493609 SOX11P35716 441 aa11.41□□□□□ -0.58
SMG7-208ENST00000493609 PCDHB9Q9Y5E1 797 aa11.41□□□□□ -0.58
SMG7-208ENST00000493609 CCDC97Q96F63 343 aaPredicted RBP11.4□□□□□ -0.58
SMG7-208ENST00000493609 ERFEQ4G0M1 354 aa11.39□□□□□ -0.59
SMG7-208ENST00000493609 CYP4X1Q8N118 509 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms